Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RPL39P34-201ENST00000477141 156 ntBASIC1.65□□□□□ -2.15
GTF3C3Q9Y5Q9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.65□□□□□ -2.15
GTF3C3Q9Y5Q9 AC007012.1-201ENST00000567192 175 ntBASIC1.65□□□□□ -2.15
GTF3C3Q9Y5Q9 MIR6082-201ENST00000613604 109 ntBASIC1.65□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.261-201ENST00000364631 102 ntBASIC1.64□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-865P-201ENST00000364772 107 ntBASIC1.64□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.588-201ENST00000391254 102 ntBASIC1.64□□□□□ -2.15
GTF3C3Q9Y5Q9 MIR1261-201ENST00000408659 82 ntBASIC1.64□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-1194P-201ENST00000516208 104 ntBASIC1.64□□□□□ -2.15
GTF3C3Q9Y5Q9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
GTF3C3Q9Y5Q9 RNA5SP133-201ENST00000363368 119 ntBASIC1.63□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-1081P-201ENST00000384537 107 ntBASIC1.63□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-735P-201ENST00000410612 107 ntBASIC1.63□□□□□ -2.15
GTF3C3Q9Y5Q9 snoU13.26-201ENST00000459452 105 ntBASIC1.63□□□□□ -2.15
GTF3C3Q9Y5Q9 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
GTF3C3Q9Y5Q9 RNA5SP205-201ENST00000364653 136 ntBASIC1.62□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.448-201ENST00000384185 108 ntBASIC1.62□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-1321P-201ENST00000390905 107 ntBASIC1.62□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU1-123P-201ENST00000458950 160 ntBASIC1.62□□□□□ -2.15
GTF3C3Q9Y5Q9 SNORA25.15-201ENST00000516487 89 ntBASIC1.62□□□□□ -2.15
GTF3C3Q9Y5Q9 AL353765.1-201ENST00000605514 183 ntBASIC1.62□□□□□ -2.15
GTF3C3Q9Y5Q9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.62□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-834P-201ENST00000362367 110 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.328-201ENST00000365208 113 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 SNORA26.9-201ENST00000391322 122 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 SNORD99-201ENST00000408612 74 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 MIR1912-201ENST00000410389 80 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU2-51P-201ENST00000410708 197 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 AC096949.1-201ENST00000412047 152 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 AC090897.1-201ENST00000580909 226 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.773-201ENST00000607168 90 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 U6.109-201ENST00000636749 87 ntBASIC1.61□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.6□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-363P-201ENST00000362895 105 ntBASIC1.6□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.353-201ENST00000365440 108 ntBASIC1.6□□□□□ -2.15
GTF3C3Q9Y5Q9 MIR608-201ENST00000384820 100 ntBASIC1.6□□□□□ -2.15
GTF3C3Q9Y5Q9 MIR548A1-201ENST00000385041 97 ntBASIC1.6□□□□□ -2.15
GTF3C3Q9Y5Q9 SNORD33.1-201ENST00000516213 88 ntBASIC1.6□□□□□ -2.15
GTF3C3Q9Y5Q9 AP003327.1-201ENST00000529684 127 ntBASIC1.6□□□□□ -2.15
GTF3C3Q9Y5Q9 AL157834.3-201ENST00000615543 103 ntBASIC1.6□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU4-67P-201ENST00000364569 141 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.309-201ENST00000365046 111 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.362-201ENST00000365518 110 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-429P-201ENST00000384582 108 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 AC004223.1-201ENST00000479840 271 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-521P-201ENST00000516663 105 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 RNU6-448P-201ENST00000517052 107 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 AC138749.4-201ENST00000563970 127 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 MIR8066-201ENST00000617280 78 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 AP001362.1-201ENST00000625165 124 ntBASIC1.59□□□□□ -2.15
GTF3C3Q9Y5Q9 Y_RNA.42-201ENST00000362660 108 ntBASIC1.58□□□□□ -2.16
GTF3C3Q9Y5Q9 Y_RNA.119-201ENST00000363301 96 ntBASIC1.58□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-60P-201ENST00000364792 103 ntBASIC1.58□□□□□ -2.16
GTF3C3Q9Y5Q9 AC004941.2-201ENST00000427009 228 ntBASIC1.58□□□□□ -2.16
GTF3C3Q9Y5Q9 AC211469.2-201ENST00000605461 205 ntBASIC1.58□□□□□ -2.16
GTF3C3Q9Y5Q9 Y_RNA.344-201ENST00000365381 112 ntBASIC1.57□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.57□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-409P-201ENST00000384114 104 ntBASIC1.57□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-412P-201ENST00000516434 106 ntBASIC1.57□□□□□ -2.16
GTF3C3Q9Y5Q9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.57□□□□□ -2.16
GTF3C3Q9Y5Q9 AL645939.4-201ENST00000604495 135 ntBASIC1.57□□□□□ -2.16
GTF3C3Q9Y5Q9 U2.22-201ENST00000636441 106 ntBASIC1.57□□□□□ -2.16
GTF3C3Q9Y5Q9 Y_RNA.85-201ENST00000363014 111 ntBASIC1.56□□□□□ -2.16
GTF3C3Q9Y5Q9 RNA5SP117-201ENST00000365294 118 ntBASIC1.56□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORD38.2-201ENST00000384470 69 ntBASIC1.56□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORA19-201ENST00000384737 128 ntBASIC1.56□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORA25.16-201ENST00000516741 121 ntBASIC1.56□□□□□ -2.16
GTF3C3Q9Y5Q9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.56□□□□□ -2.16
GTF3C3Q9Y5Q9 AL162726.3-218ENST00000636401 95 ntBASIC1.56□□□□□ -2.16
GTF3C3Q9Y5Q9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
GTF3C3Q9Y5Q9 MIR101-2-201ENST00000362195 79 ntBASIC1.55□□□□□ -2.16
GTF3C3Q9Y5Q9 Y_RNA.155-201ENST00000363632 101 ntBASIC1.55□□□□□ -2.16
GTF3C3Q9Y5Q9 RNA5SP190-201ENST00000365222 118 ntBASIC1.55□□□□□ -2.16
GTF3C3Q9Y5Q9 MIR573-201ENST00000384964 99 ntBASIC1.55□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-1018P-201ENST00000516577 106 ntBASIC1.55□□□□□ -2.16
GTF3C3Q9Y5Q9 MTND5P34-201ENST00000568888 325 ntBASIC1.55□□□□□ -2.16
GTF3C3Q9Y5Q9 AC011195.1-201ENST00000578177 177 ntBASIC1.55□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU4-45P-201ENST00000365469 141 ntBASIC1.54□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORA22-201ENST00000383907 134 ntBASIC1.54□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORA22C-201ENST00000384614 134 ntBASIC1.54□□□□□ -2.16
GTF3C3Q9Y5Q9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-531P-201ENST00000516694 104 ntBASIC1.54□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
GTF3C3Q9Y5Q9 MIR548AI-201ENST00000579940 88 ntBASIC1.54□□□□□ -2.16
GTF3C3Q9Y5Q9 MIR1255B1-201ENST00000636325 63 ntBASIC1.54□□□□□ -2.16
GTF3C3Q9Y5Q9 AL512310.12-203ENST00000640543 90 ntBASIC1.54□□□□□ -2.16
GTF3C3Q9Y5Q9 Y_RNA.49-201ENST00000362714 112 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-1056P-201ENST00000383996 107 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORD116-21-201ENST00000384507 92 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-880P-201ENST00000384526 107 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-816P-201ENST00000390914 107 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-1268P-201ENST00000391214 107 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-1239P-201ENST00000391310 107 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 RNU6-1064P-201ENST00000410626 104 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 BTF3P4-201ENST00000418852 495 ntBASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.53□□□□□ -2.16
GTF3C3Q9Y5Q9 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms