Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.512-201ENST00000384518 102 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.567-201ENST00000384736 106 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 RNA5SP237-201ENST00000410414 113 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 AP002392.1-201ENST00000537692 208 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 AC011195.1-201ENST00000578177 177 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 RNU6-690P-201ENST00000365242 106 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU6-913P-201ENST00000390913 95 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AC006461.1-201ENST00000412637 326 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 ACA64.5-201ENST00000516207 127 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNA5SP67-201ENST00000516422 131 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 SNORA31.14-201ENST00000516728 116 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU6-1271P-201ENST00000517049 105 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU7-35P-201ENST00000517174 62 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AL162730.1-201ENST00000605734 292 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 MIR30D-201ENST00000362283 70 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 SNORD114-10-201ENST00000363409 72 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU6-726P-201ENST00000364680 107 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU6-768P-201ENST00000384683 107 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AL078595.1-201ENST00000404458 226 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AC096949.1-201ENST00000412047 152 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.662-201ENST00000516028 97 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU7-121P-201ENST00000516604 62 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AC112693.2-201ENST00000556538 232 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 MIR4639-201ENST00000584938 69 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 SNORD18A-201ENST00000363753 72 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 SNORA1-201ENST00000384107 130 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 MIR938-201ENST00000401216 83 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-1149P-201ENST00000516810 97 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 MIR4308-201ENST00000580634 81 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 MIR4491-201ENST00000581087 68 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 AL365265.1-201ENST00000621045 234 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.174-201ENST00000363781 105 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU4-67P-201ENST00000364569 141 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-196P-201ENST00000384315 107 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.552-201ENST00000384665 112 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-1321P-201ENST00000390905 107 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNA5SP144-201ENST00000410846 116 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 SNX3P1X-201ENST00000414887 175 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 AC073261.1-201ENST00000429409 121 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.644-201ENST00000459006 113 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.674-201ENST00000516362 113 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-765P-201ENST00000516916 99 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-111P-201ENST00000517179 105 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 AC021613.1-201ENST00000623880 111 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 MTND5P32-201ENST00000560711 1802 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.35-201ENST00000362601 101 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 SNORD115-2-201ENST00000362842 82 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNU6-1099P-201ENST00000363533 107 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 SNORD115-20-201ENST00000365099 82 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 SNORD18B-201ENST00000365659 72 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNU6-1126P-201ENST00000384002 107 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNY1P6-201ENST00000384193 109 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 AL138752.1-201ENST00000452964 351 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNU4-54P-201ENST00000516428 129 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 DNAJC19P2-201ENST00000593340 302 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 SNORA25.18-201ENST00000607153 114 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 MIR6844-201ENST00000637122 62 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNU6-1020P-201ENST00000363684 107 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.452-201ENST00000384202 108 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.470-201ENST00000384307 117 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU6-239P-201ENST00000390990 99 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.793-201ENST00000411222 111 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU7-45P-201ENST00000459460 63 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 SNORD116-25-201ENST00000516517 92 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU2-60P-201ENST00000517290 128 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU4-84P-201ENST00000364200 139 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.785-201ENST00000384290 109 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 MIR604-201ENST00000384880 94 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU6-1135P-201ENST00000411083 103 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU7-79P-201ENST00000516082 62 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNY3P16-201ENST00000516338 101 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 FTX_2.1-201ENST00000618816 94 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 U6.109-201ENST00000636749 87 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 SNORA25.7-201ENST00000364375 127 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU4-16P-201ENST00000364737 141 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNY1P13-201ENST00000365030 105 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU6-574P-201ENST00000384265 107 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 SNORD83.1-201ENST00000411362 77 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU6-1258P-201ENST00000516911 111 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AC130289.1-201ENST00000577321 73 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.757-201ENST00000578934 114 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.8-201ENST00000362353 102 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.536-201ENST00000384621 113 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.617-201ENST00000410920 90 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AC015818.7-201ENST00000428754 109 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AC087499.7-201ENST00000441958 109 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AL121914.1-201ENST00000450188 156 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU6-1219P-201ENST00000516143 112 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU2-35P-201ENST00000516446 142 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AC022523.2-201ENST00000561045 150 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNA5SP98-201ENST00000363158 137 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU6-309P-201ENST00000364573 106 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.297-201ENST00000364950 91 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU6-1336P-201ENST00000383886 109 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms