Protein–RNA interactions for Protein: Q9Y3Q3

TMED3, Transmembrane emp24 domain-containing protein 3, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3Q9Y3Q3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.5□□□□□ -2.33
TMED3Q9Y3Q3 Y_RNA.13-201ENST00000362403 112 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 RNU6-394P-201ENST00000410735 107 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 AL512326.2-201ENST00000426359 151 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 RNU7-197P-201ENST00000458836 62 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 RNA5SP33-201ENST00000516687 98 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 AC021443.1-201ENST00000604478 211 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 FTX_2.1-201ENST00000618816 94 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
TMED3Q9Y3Q3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
TMED3Q9Y3Q3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.48□□□□□ -2.33
TMED3Q9Y3Q3 Y_RNA.690-201ENST00000516603 95 ntBASIC0.48□□□□□ -2.33
TMED3Q9Y3Q3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.48□□□□□ -2.33
TMED3Q9Y3Q3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.48□□□□□ -2.33
TMED3Q9Y3Q3 Y_RNA.778-201ENST00000620203 90 ntBASIC0.48□□□□□ -2.33
TMED3Q9Y3Q3 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
TMED3Q9Y3Q3 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
TMED3Q9Y3Q3 RNU6-403P-201ENST00000363163 104 ntBASIC0.47□□□□□ -2.33
TMED3Q9Y3Q3 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
TMED3Q9Y3Q3 RNU6-309P-201ENST00000364573 106 ntBASIC0.47□□□□□ -2.33
TMED3Q9Y3Q3 RNU4-11P-201ENST00000365287 132 ntBASIC0.47□□□□□ -2.33
TMED3Q9Y3Q3 RNA5SP117-201ENST00000365294 118 ntBASIC0.47□□□□□ -2.33
TMED3Q9Y3Q3 PCNPP3-201ENST00000393579 471 ntBASIC0.47□□□□□ -2.33
TMED3Q9Y3Q3 Y_RNA.686-201ENST00000516548 134 ntBASIC0.47□□□□□ -2.33
TMED3Q9Y3Q3 MIR548AE2-201ENST00000583456 67 ntBASIC0.47□□□□□ -2.33
TMED3Q9Y3Q3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.46□□□□□ -2.34
TMED3Q9Y3Q3 RNU6-449P-201ENST00000383914 107 ntBASIC0.46□□□□□ -2.34
TMED3Q9Y3Q3 MIR216A-201ENST00000385063 110 ntBASIC0.46□□□□□ -2.34
TMED3Q9Y3Q3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
TMED3Q9Y3Q3 RNU7-164P-201ENST00000459221 62 ntBASIC0.46□□□□□ -2.34
TMED3Q9Y3Q3 RNU7-123P-201ENST00000515911 60 ntBASIC0.46□□□□□ -2.34
TMED3Q9Y3Q3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
TMED3Q9Y3Q3 RNU6-508P-201ENST00000363231 103 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 Y_RNA.298-201ENST00000364960 107 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 Y_RNA.299-201ENST00000364973 94 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 Y_RNA.617-201ENST00000410920 90 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 RNU7-137P-201ENST00000516788 62 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 RNA5SP94-201ENST00000516917 108 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 RNU6-794P-201ENST00000517261 64 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 MIR3678-201ENST00000578455 94 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 uc_338.16-201ENST00000621804 95 ntBASIC0.45□□□□□ -2.34
TMED3Q9Y3Q3 SNORD114-10-201ENST00000363409 72 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 RNU6-151P-201ENST00000364158 107 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 RNU6-1130P-201ENST00000365434 107 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 Y_RNA.366-201ENST00000365540 102 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 SNORA32-201ENST00000384072 121 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 AC092634.7-201ENST00000621022 103 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 AL589743.1-201ENST00000551932 2712 ntBASIC0.44□□□□□ -2.34
TMED3Q9Y3Q3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 RNU6-886P-201ENST00000384319 105 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 SNORA72.6-201ENST00000384520 129 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 RNU4-69P-201ENST00000410677 143 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 MIR1270-201ENST00000459320 83 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 SNORA25.16-201ENST00000516741 121 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 RNU6-135P-201ENST00000516769 101 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 AL359881.1-201ENST00000602916 267 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 AC098479.1-201ENST00000609225 154 ntBASIC0.43□□□□□ -2.34
TMED3Q9Y3Q3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.42□□□□□ -2.34
TMED3Q9Y3Q3 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
TMED3Q9Y3Q3 SNORD116-18-201ENST00000383961 92 ntBASIC0.42□□□□□ -2.34
TMED3Q9Y3Q3 RNU6-291P-201ENST00000384720 107 ntBASIC0.42□□□□□ -2.34
TMED3Q9Y3Q3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.42□□□□□ -2.34
TMED3Q9Y3Q3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
TMED3Q9Y3Q3 SNORD67.1-201ENST00000516618 108 ntBASIC0.42□□□□□ -2.34
TMED3Q9Y3Q3 MIR3144-201ENST00000579460 79 ntBASIC0.42□□□□□ -2.34
TMED3Q9Y3Q3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
TMED3Q9Y3Q3 RNU4-58P-201ENST00000363192 141 ntBASIC0.41□□□□□ -2.34
TMED3Q9Y3Q3 RNY1P4-201ENST00000384595 115 ntBASIC0.41□□□□□ -2.34
TMED3Q9Y3Q3 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
TMED3Q9Y3Q3 AC138749.4-201ENST00000563970 127 ntBASIC0.41□□□□□ -2.34
TMED3Q9Y3Q3 MIR3121-201ENST00000579680 77 ntBASIC0.41□□□□□ -2.34
TMED3Q9Y3Q3 AC108081.1-201ENST00000604358 221 ntBASIC0.41□□□□□ -2.34
TMED3Q9Y3Q3 AP001340.1-201ENST00000624405 217 ntBASIC0.41□□□□□ -2.34
TMED3Q9Y3Q3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 RNA5SP133-201ENST00000363368 119 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 Y_RNA.270-201ENST00000364693 104 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 Y_RNA.555-201ENST00000384673 110 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 RNU6-679P-201ENST00000391003 106 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 RNU6-460P-201ENST00000391158 108 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 MIR513C-201ENST00000401352 84 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 SNORA40.8-201ENST00000411034 126 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 RNU6-469P-201ENST00000516253 101 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 SNORA31.14-201ENST00000516728 116 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 RNA5SP480-201ENST00000516840 109 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 RN7SL793P-201ENST00000583259 296 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 AL137067.1-201ENST00000615933 120 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.4□□□□□ -2.35
TMED3Q9Y3Q3 AC243829.3-201ENST00000622177 108 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms