Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 Y_RNA.174-201ENST00000363781 105 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.357-201ENST00000365487 109 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-949P-201ENST00000384040 107 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 SNORA18-201ENST00000384416 132 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 SNORA72.6-201ENST00000384520 129 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-1086P-201ENST00000410930 100 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 SNORA40.8-201ENST00000411034 126 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 AC096949.1-201ENST00000412047 152 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-135P-201ENST00000516769 101 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 SCARNA15-202ENST00000516881 127 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-1258P-201ENST00000516911 111 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 RNA5SP94-201ENST00000516917 108 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-111P-201ENST00000517179 105 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 AC133485.4-201ENST00000561835 220 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 MIR3678-201ENST00000578455 94 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 U6.106-201ENST00000636360 105 ntBASIC0.32□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.31□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.435-201ENST00000384095 112 ntBASIC0.31□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-574P-201ENST00000384265 107 ntBASIC0.31□□□□□ -2.36
RPH3AQ9Y2J0 MIR644A-201ENST00000385262 94 ntBASIC0.31□□□□□ -2.36
RPH3AQ9Y2J0 RNA5SP299-201ENST00000391203 116 ntBASIC0.31□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-765P-201ENST00000516916 99 ntBASIC0.31□□□□□ -2.36
RPH3AQ9Y2J0 MIR5589-201ENST00000579442 60 ntBASIC0.31□□□□□ -2.36
RPH3AQ9Y2J0 MIR4503-201ENST00000582187 83 ntBASIC0.31□□□□□ -2.36
RPH3AQ9Y2J0 MIR6082-201ENST00000613604 109 ntBASIC0.31□□□□□ -2.36
RPH3AQ9Y2J0 MIR411-201ENST00000362239 96 ntBASIC0.3□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.3□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-818P-201ENST00000364837 108 ntBASIC0.3□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
RPH3AQ9Y2J0 SNORD18B-201ENST00000365659 72 ntBASIC0.3□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.549-201ENST00000384657 102 ntBASIC0.3□□□□□ -2.36
RPH3AQ9Y2J0 RNU7-113P-201ENST00000459273 62 ntBASIC0.3□□□□□ -2.36
RPH3AQ9Y2J0 AC011603.4-201ENST00000611325 277 ntBASIC0.3□□□□□ -2.36
RPH3AQ9Y2J0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.171-201ENST00000363760 102 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-1229P-201ENST00000364295 107 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.307-201ENST00000365022 117 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 MIR518A1-201ENST00000385068 85 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.588-201ENST00000391254 102 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 DEFB131E-201ENST00000532329 154 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 AC022523.2-201ENST00000561045 150 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.757-201ENST00000578934 114 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 MIR4491-201ENST00000581087 68 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 MIR6844-201ENST00000637122 62 ntBASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.29□□□□□ -2.36
RPH3AQ9Y2J0 SNORA36.1-201ENST00000363424 132 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.170-201ENST00000363746 110 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-690P-201ENST00000365242 106 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-463P-201ENST00000384340 107 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-918P-201ENST00000391219 106 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 SNORA75.5-201ENST00000391291 81 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 AL512326.2-201ENST00000426359 151 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 RNU6-863P-201ENST00000515989 104 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 RNU7-79P-201ENST00000516082 62 ntBASIC0.28□□□□□ -2.36
RPH3AQ9Y2J0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 Y_RNA.52-201ENST00000362760 96 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 snoU13.19-201ENST00000459148 104 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 RNA5SP33-201ENST00000516687 98 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 SNORA25.16-201ENST00000516741 121 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 Y_RNA.697-201ENST00000516776 113 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 MTND5P34-201ENST00000568888 325 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 MIR3646-201ENST00000578301 84 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 MIR5190-201ENST00000581537 80 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 MIR4802-201ENST00000581881 80 ntBASIC0.27□□□□□ -2.37
RPH3AQ9Y2J0 RNY1P13-201ENST00000365030 105 ntBASIC0.26□□□□□ -2.37
RPH3AQ9Y2J0 RNU6-47P-201ENST00000383866 107 ntBASIC0.26□□□□□ -2.37
RPH3AQ9Y2J0 Y_RNA.470-201ENST00000384307 117 ntBASIC0.26□□□□□ -2.37
RPH3AQ9Y2J0 SNORA8.2-201ENST00000384372 139 ntBASIC0.26□□□□□ -2.37
RPH3AQ9Y2J0 SNORD37.2-201ENST00000391075 66 ntBASIC0.26□□□□□ -2.37
RPH3AQ9Y2J0 RNA5SP144-201ENST00000410846 116 ntBASIC0.26□□□□□ -2.37
RPH3AQ9Y2J0 RNU4-58P-201ENST00000363192 141 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 SNORD44.1-201ENST00000363202 61 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 Y_RNA.144-201ENST00000363521 113 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 Y_RNA.233-201ENST00000364407 101 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 RNU6-1082P-201ENST00000364574 107 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 Y_RNA.536-201ENST00000384621 113 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 RNU6-768P-201ENST00000384683 107 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 RNA5SP25-201ENST00000410815 110 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 SNORA31.14-201ENST00000516728 116 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 AC009779.6-201ENST00000603972 165 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 AC072026.1-201ENST00000605023 201 ntBASIC0.25□□□□□ -2.37
RPH3AQ9Y2J0 MIR101-2-201ENST00000362195 79 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 RNU6-349P-201ENST00000362402 107 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 RNU6-535P-201ENST00000384722 107 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 Y_RNA.793-201ENST00000411222 111 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 SNRPGP12-201ENST00000449481 213 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 RNU6-1194P-201ENST00000516208 104 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 AC022559.1-201ENST00000520905 205 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.24□□□□□ -2.37
RPH3AQ9Y2J0 SNORD115-2-201ENST00000362842 82 ntBASIC0.23□□□□□ -2.37
RPH3AQ9Y2J0 RNU6-508P-201ENST00000363231 103 ntBASIC0.23□□□□□ -2.37
RPH3AQ9Y2J0 SNORD118-201ENST00000363593 134 ntBASIC0.23□□□□□ -2.37
RPH3AQ9Y2J0 RNY1P11-201ENST00000363759 113 ntBASIC0.23□□□□□ -2.37
RPH3AQ9Y2J0 Y_RNA.299-201ENST00000364973 94 ntBASIC0.23□□□□□ -2.37
RPH3AQ9Y2J0 SNORD115-20-201ENST00000365099 82 ntBASIC0.23□□□□□ -2.37
RPH3AQ9Y2J0 RNU6-1318P-201ENST00000365389 103 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 250.2 ms