Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 AL133373.1-201ENST00000497098 94 ntBASIC2.17□□□□□ -2.06
FNDC3AQ9Y2H6 MIR4264-201ENST00000583520 66 ntBASIC2.17□□□□□ -2.06
FNDC3AQ9Y2H6 MIR30D-201ENST00000362283 70 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 RNU6-654P-201ENST00000364373 107 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 RNY1P2-201ENST00000364820 117 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 SNORD1A-201ENST00000364968 72 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 RNU6-1124P-201ENST00000384169 107 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 RNA5SP95-201ENST00000410319 137 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 RNU7-62P-201ENST00000458856 62 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 RPS27P21-201ENST00000486977 252 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 RPS29P11-201ENST00000496507 171 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 MIR2115-201ENST00000516657 100 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 AC138749.4-201ENST00000563970 127 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 AL513043.2-201ENST00000573941 143 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 MIR4500-201ENST00000579472 76 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 MIR5588-201ENST00000581890 63 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 SNORA4-201ENST00000584302 138 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 U6.109-201ENST00000636749 87 ntBASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
FNDC3AQ9Y2H6 AC131280.1-202ENST00000624067 4211 ntBASIC2.15□□□□□ -2.06
FNDC3AQ9Y2H6 MIR302D-201ENST00000362275 68 ntBASIC2.15□□□□□ -2.07
FNDC3AQ9Y2H6 RNU6-228P-201ENST00000362700 106 ntBASIC2.15□□□□□ -2.07
FNDC3AQ9Y2H6 SNORA2B-201ENST00000384583 137 ntBASIC2.15□□□□□ -2.07
FNDC3AQ9Y2H6 AC245517.4-201ENST00000448601 281 ntBASIC2.15□□□□□ -2.07
FNDC3AQ9Y2H6 RNA5SP200-201ENST00000516360 103 ntBASIC2.15□□□□□ -2.07
FNDC3AQ9Y2H6 AP003716.2-201ENST00000528260 108 ntBASIC2.15□□□□□ -2.07
FNDC3AQ9Y2H6 MIR4446-201ENST00000578505 67 ntBASIC2.15□□□□□ -2.07
FNDC3AQ9Y2H6 AC025521.1-201ENST00000621624 286 ntBASIC2.15□□□□□ -2.07
FNDC3AQ9Y2H6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
FNDC3AQ9Y2H6 MIR103A2-201ENST00000362154 78 ntBASIC2.14□□□□□ -2.07
FNDC3AQ9Y2H6 Y_RNA.168-201ENST00000363740 102 ntBASIC2.14□□□□□ -2.07
FNDC3AQ9Y2H6 RNU6-979P-201ENST00000383896 107 ntBASIC2.14□□□□□ -2.07
FNDC3AQ9Y2H6 RNU6-613P-201ENST00000410412 108 ntBASIC2.14□□□□□ -2.07
FNDC3AQ9Y2H6 AL161722.3-201ENST00000605789 2983 ntBASIC2.14□□□□□ -2.07
FNDC3AQ9Y2H6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
FNDC3AQ9Y2H6 RNA5SP264-201ENST00000363115 107 ntBASIC2.13□□□□□ -2.07
FNDC3AQ9Y2H6 RNA5SP133-201ENST00000363368 119 ntBASIC2.13□□□□□ -2.07
FNDC3AQ9Y2H6 U8.13-201ENST00000390842 128 ntBASIC2.13□□□□□ -2.07
FNDC3AQ9Y2H6 Y_RNA.611-201ENST00000410682 108 ntBASIC2.13□□□□□ -2.07
FNDC3AQ9Y2H6 RNA5SP225-201ENST00000410874 135 ntBASIC2.13□□□□□ -2.07
FNDC3AQ9Y2H6 AC079140.2-201ENST00000506193 142 ntBASIC2.13□□□□□ -2.07
FNDC3AQ9Y2H6 Y_RNA.685-201ENST00000516532 108 ntBASIC2.13□□□□□ -2.07
FNDC3AQ9Y2H6 RNU6-295P-201ENST00000516901 104 ntBASIC2.13□□□□□ -2.07
FNDC3AQ9Y2H6 HSBP1P2-201ENST00000299671 229 ntBASIC2.12□□□□□ -2.07
FNDC3AQ9Y2H6 MIR30A-201ENST00000385092 71 ntBASIC2.12□□□□□ -2.07
FNDC3AQ9Y2H6 MIR1255A-201ENST00000408338 113 ntBASIC2.12□□□□□ -2.07
FNDC3AQ9Y2H6 MIR3937-201ENST00000580135 106 ntBASIC2.12□□□□□ -2.07
FNDC3AQ9Y2H6 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
FNDC3AQ9Y2H6 Y_RNA.4-201ENST00000362333 112 ntBASIC2.11□□□□□ -2.07
FNDC3AQ9Y2H6 Y_RNA.119-201ENST00000363301 96 ntBASIC2.11□□□□□ -2.07
FNDC3AQ9Y2H6 RNU6-1125P-201ENST00000363601 107 ntBASIC2.11□□□□□ -2.07
FNDC3AQ9Y2H6 RNU6-480P-201ENST00000384332 107 ntBASIC2.11□□□□□ -2.07
FNDC3AQ9Y2H6 MT-TN-201ENST00000387400 73 ntBASIC2.11□□□□□ -2.07
FNDC3AQ9Y2H6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
FNDC3AQ9Y2H6 RNU4-83P-201ENST00000410863 133 ntBASIC2.11□□□□□ -2.07
FNDC3AQ9Y2H6 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.11□□□□□ -2.07
FNDC3AQ9Y2H6 RNU6-787P-201ENST00000384032 107 ntBASIC2.1□□□□□ -2.07
FNDC3AQ9Y2H6 BX276092.1-201ENST00000427368 251 ntBASIC2.1□□□□□ -2.07
FNDC3AQ9Y2H6 RPL30P7-201ENST00000479312 323 ntBASIC2.1□□□□□ -2.07
FNDC3AQ9Y2H6 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
FNDC3AQ9Y2H6 RNU6-638P-201ENST00000516582 104 ntBASIC2.1□□□□□ -2.07
FNDC3AQ9Y2H6 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
FNDC3AQ9Y2H6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.1□□□□□ -2.07
FNDC3AQ9Y2H6 MIR548BB-201ENST00000626714 66 ntBASIC2.1□□□□□ -2.07
FNDC3AQ9Y2H6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
FNDC3AQ9Y2H6 Y_RNA.338-201ENST00000365320 114 ntBASIC2.09□□□□□ -2.07
FNDC3AQ9Y2H6 SNORA26.9-201ENST00000391322 122 ntBASIC2.09□□□□□ -2.07
FNDC3AQ9Y2H6 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
FNDC3AQ9Y2H6 RNA5SP82-201ENST00000516707 92 ntBASIC2.09□□□□□ -2.07
FNDC3AQ9Y2H6 RNU11-2P-201ENST00000516898 142 ntBASIC2.09□□□□□ -2.07
FNDC3AQ9Y2H6 RNU6-165P-201ENST00000517170 99 ntBASIC2.09□□□□□ -2.07
FNDC3AQ9Y2H6 MIR6845-201ENST00000613182 61 ntBASIC2.09□□□□□ -2.07
FNDC3AQ9Y2H6 MIR3202-2-201ENST00000635980 79 ntBASIC2.09□□□□□ -2.07
FNDC3AQ9Y2H6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
FNDC3AQ9Y2H6 RNU6-509P-201ENST00000363519 107 ntBASIC2.08□□□□□ -2.08
FNDC3AQ9Y2H6 Y_RNA.437-201ENST00000384113 113 ntBASIC2.08□□□□□ -2.08
FNDC3AQ9Y2H6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
FNDC3AQ9Y2H6 SNORA48.3-201ENST00000391081 134 ntBASIC2.08□□□□□ -2.08
FNDC3AQ9Y2H6 MIR3664-201ENST00000579074 99 ntBASIC2.08□□□□□ -2.08
FNDC3AQ9Y2H6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
FNDC3AQ9Y2H6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
FNDC3AQ9Y2H6 RNU6-633P-201ENST00000362612 103 ntBASIC2.07□□□□□ -2.08
FNDC3AQ9Y2H6 SNORD115-27-201ENST00000364430 82 ntBASIC2.07□□□□□ -2.08
FNDC3AQ9Y2H6 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
FNDC3AQ9Y2H6 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
FNDC3AQ9Y2H6 RNU6-850P-201ENST00000516934 103 ntBASIC2.07□□□□□ -2.08
FNDC3AQ9Y2H6 SNORA44.1-201ENST00000517031 108 ntBASIC2.07□□□□□ -2.08
FNDC3AQ9Y2H6 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
FNDC3AQ9Y2H6 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
FNDC3AQ9Y2H6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 Y_RNA.57-201ENST00000362806 113 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 Y_RNA.313-201ENST00000365095 103 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 RNU6-1065P-201ENST00000384513 106 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 MT-TF-201ENST00000387314 71 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 RNA5SP247-201ENST00000411181 105 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 SNRPGP12-201ENST00000449481 213 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms