Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MIR548AE2-201ENST00000583456 67 ntBASIC1.39□□□□□ -2.19
CDK11AQ9UQ88 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.39□□□□□ -2.19
CDK11AQ9UQ88 AC103810.9-201ENST00000606688 112 ntBASIC1.39□□□□□ -2.19
CDK11AQ9UQ88 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 SNORD58C-201ENST00000365223 64 ntBASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 RNU6-81P-201ENST00000365608 104 ntBASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 MIR100-201ENST00000385259 80 ntBASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 SNORD77B-201ENST00000391112 67 ntBASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 SNORD83.1-201ENST00000411362 77 ntBASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 U7.7-201ENST00000459276 60 ntBASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 RNU7-79P-201ENST00000516082 62 ntBASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 ACA64.5-201ENST00000516207 127 ntBASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 RNU6-1110P-201ENST00000516462 101 ntBASIC1.38□□□□□ -2.19
CDK11AQ9UQ88 Y_RNA.198-201ENST00000364013 98 ntBASIC1.37□□□□□ -2.19
CDK11AQ9UQ88 Y_RNA.346-201ENST00000365385 112 ntBASIC1.37□□□□□ -2.19
CDK11AQ9UQ88 RNU6-949P-201ENST00000384040 107 ntBASIC1.37□□□□□ -2.19
CDK11AQ9UQ88 Y_RNA.528-201ENST00000384575 108 ntBASIC1.37□□□□□ -2.19
CDK11AQ9UQ88 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.37□□□□□ -2.19
CDK11AQ9UQ88 AC004941.2-201ENST00000427009 228 ntBASIC1.37□□□□□ -2.19
CDK11AQ9UQ88 MIR4771-2-201ENST00000577758 74 ntBASIC1.37□□□□□ -2.19
CDK11AQ9UQ88 MIR4771-1-201ENST00000582617 74 ntBASIC1.37□□□□□ -2.19
CDK11AQ9UQ88 AC025166.1-201ENST00000612411 163 ntBASIC1.37□□□□□ -2.19
CDK11AQ9UQ88 SNORA32-201ENST00000384072 121 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 RNU6-959P-201ENST00000384671 107 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 MIR1257-201ENST00000408490 117 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 MIR1827-201ENST00000408549 66 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 snoU13.21-201ENST00000459368 105 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 RNU6-772P-201ENST00000516042 105 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 RNU6-781P-201ENST00000516377 101 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 MIR4698-201ENST00000577795 80 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 MIR3910-1-201ENST00000580936 111 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 MIR3163-201ENST00000581592 73 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 uc_338.6-201ENST00000613544 171 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 AC132825.6-201ENST00000638861 357 ntBASIC1.36□□□□□ -2.19
CDK11AQ9UQ88 AC023934.1-201ENST00000574529 2389 ntBASIC1.35□□□□□ -2.19
CDK11AQ9UQ88 Y_RNA.71-201ENST00000362892 104 ntBASIC1.35□□□□□ -2.19
CDK11AQ9UQ88 RNU6-1187P-201ENST00000364771 110 ntBASIC1.35□□□□□ -2.19
CDK11AQ9UQ88 AC025627.3-201ENST00000582078 182 ntBASIC1.35□□□□□ -2.19
CDK11AQ9UQ88 FAM71BP1-201ENST00000604431 523 ntBASIC1.35□□□□□ -2.19
CDK11AQ9UQ88 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
CDK11AQ9UQ88 AL157777.2-201ENST00000258070 137 ntBASIC1.34□□□□□ -2.19
CDK11AQ9UQ88 RNY1P13-201ENST00000365030 105 ntBASIC1.34□□□□□ -2.19
CDK11AQ9UQ88 RNU7-185P-201ENST00000459215 60 ntBASIC1.34□□□□□ -2.19
CDK11AQ9UQ88 RNU6-977P-201ENST00000516411 103 ntBASIC1.34□□□□□ -2.19
CDK11AQ9UQ88 RNU6-789P-201ENST00000517105 102 ntBASIC1.34□□□□□ -2.19
CDK11AQ9UQ88 AC022523.2-201ENST00000561045 150 ntBASIC1.34□□□□□ -2.19
CDK11AQ9UQ88 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.34□□□□□ -2.19
CDK11AQ9UQ88 MIRLET7F2-201ENST00000385277 83 ntBASIC1.33□□□□□ -2.2
CDK11AQ9UQ88 SNORD89-201ENST00000390981 114 ntBASIC1.33□□□□□ -2.2
CDK11AQ9UQ88 SNORD93-201ENST00000408813 74 ntBASIC1.33□□□□□ -2.2
CDK11AQ9UQ88 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.33□□□□□ -2.2
CDK11AQ9UQ88 RPL39P28-201ENST00000465655 155 ntBASIC1.33□□□□□ -2.2
CDK11AQ9UQ88 RNA5SP255-201ENST00000516370 107 ntBASIC1.33□□□□□ -2.2
CDK11AQ9UQ88 RNU6-1234P-201ENST00000516877 103 ntBASIC1.33□□□□□ -2.2
CDK11AQ9UQ88 Y_RNA.218-201ENST00000364218 104 ntBASIC1.32□□□□□ -2.2
CDK11AQ9UQ88 SNORD116-14-201ENST00000383894 92 ntBASIC1.32□□□□□ -2.2
CDK11AQ9UQ88 SNORD116-17-201ENST00000383929 92 ntBASIC1.32□□□□□ -2.2
CDK11AQ9UQ88 SNORD116-15-201ENST00000384445 92 ntBASIC1.32□□□□□ -2.2
CDK11AQ9UQ88 RNU6-1104P-201ENST00000384723 104 ntBASIC1.32□□□□□ -2.2
CDK11AQ9UQ88 SNORD116-19-201ENST00000384729 92 ntBASIC1.32□□□□□ -2.2
CDK11AQ9UQ88 AC008267.6-201ENST00000441664 139 ntBASIC1.31□□□□□ -2.2
CDK11AQ9UQ88 PSMC1P5-201ENST00000512850 177 ntBASIC1.31□□□□□ -2.2
CDK11AQ9UQ88 RNU7-6P-201ENST00000516845 62 ntBASIC1.31□□□□□ -2.2
CDK11AQ9UQ88 MIR4676-201ENST00000583078 72 ntBASIC1.31□□□□□ -2.2
CDK11AQ9UQ88 MIR608-201ENST00000384820 100 ntBASIC1.3□□□□□ -2.2
CDK11AQ9UQ88 MIR125B2-201ENST00000385128 89 ntBASIC1.3□□□□□ -2.2
CDK11AQ9UQ88 MIR938-201ENST00000401216 83 ntBASIC1.3□□□□□ -2.2
CDK11AQ9UQ88 RNU4-61P-201ENST00000411243 107 ntBASIC1.3□□□□□ -2.2
CDK11AQ9UQ88 RNU7-107P-201ENST00000459121 61 ntBASIC1.3□□□□□ -2.2
CDK11AQ9UQ88 Y_RNA.712-201ENST00000517011 92 ntBASIC1.3□□□□□ -2.2
CDK11AQ9UQ88 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.3□□□□□ -2.2
CDK11AQ9UQ88 MTND5P18-201ENST00000445624 1801 ntBASIC1.3□□□□□ -2.2
CDK11AQ9UQ88 Y_RNA.127-201ENST00000363386 109 ntBASIC1.29□□□□□ -2.2
CDK11AQ9UQ88 SNORD114-10-201ENST00000363409 72 ntBASIC1.29□□□□□ -2.2
CDK11AQ9UQ88 RNY4P6-201ENST00000363667 96 ntBASIC1.29□□□□□ -2.2
CDK11AQ9UQ88 RNU6-1117P-201ENST00000384525 104 ntBASIC1.29□□□□□ -2.2
CDK11AQ9UQ88 RNU6-659P-201ENST00000516454 104 ntBASIC1.29□□□□□ -2.2
CDK11AQ9UQ88 RNU6-62P-201ENST00000516526 102 ntBASIC1.29□□□□□ -2.2
CDK11AQ9UQ88 MIR4714-201ENST00000580728 77 ntBASIC1.29□□□□□ -2.2
CDK11AQ9UQ88 RN7SL793P-201ENST00000583259 296 ntBASIC1.29□□□□□ -2.2
CDK11AQ9UQ88 U6.95-201ENST00000636931 70 ntBASIC1.29□□□□□ -2.2
CDK11AQ9UQ88 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDK11AQ9UQ88 RNU6-364P-201ENST00000384387 107 ntBASIC1.28□□□□□ -2.2
CDK11AQ9UQ88 MIR520F-201ENST00000384824 87 ntBASIC1.28□□□□□ -2.2
CDK11AQ9UQ88 U8.15-201ENST00000390947 134 ntBASIC1.28□□□□□ -2.2
CDK11AQ9UQ88 AC020891.4-201ENST00000605745 93 ntBASIC1.28□□□□□ -2.2
CDK11AQ9UQ88 RNU6-447P-201ENST00000410293 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-1118P-201ENST00000410382 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-1076P-201ENST00000410397 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-355P-201ENST00000410427 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-791P-201ENST00000410467 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-705P-201ENST00000410601 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-1100P-201ENST00000410691 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-860P-201ENST00000410860 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-1217P-201ENST00000411276 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 RNU6-785P-201ENST00000411324 104 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 SNORD67.1-201ENST00000516618 108 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 AC133485.1-201ENST00000567176 124 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 MIR4804-201ENST00000581683 73 ntBASIC1.27□□□□□ -2.21
CDK11AQ9UQ88 U6.90-201ENST00000614007 104 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms