Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR583-201ENST00000384846 75 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 AC245517.4-201ENST00000448601 281 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 MIR4299-201ENST00000577899 72 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 MIR6766-201ENST00000622641 72 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 MIR194-1-201ENST00000384892 85 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 MIR653-201ENST00000385279 96 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 AL161932.1-201ENST00000437408 146 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 RPS29P11-201ENST00000496507 171 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 RNA5SP182-201ENST00000516064 82 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 AC020891.4-201ENST00000605745 93 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.68□□□□□ -1.98
ZC3H4Q9UPT8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
ZC3H4Q9UPT8 RNU6-439P-201ENST00000384188 106 ntBASIC2.67□□□□□ -1.98
ZC3H4Q9UPT8 RNU6-24P-201ENST00000384440 107 ntBASIC2.67□□□□□ -1.98
ZC3H4Q9UPT8 SNORA2B-201ENST00000384583 137 ntBASIC2.67□□□□□ -1.98
ZC3H4Q9UPT8 HMGN2P19-201ENST00000425149 265 ntBASIC2.67□□□□□ -1.98
ZC3H4Q9UPT8 AC090897.1-201ENST00000580909 226 ntBASIC2.67□□□□□ -1.98
ZC3H4Q9UPT8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.66□□□□□ -1.98
ZC3H4Q9UPT8 MIR378A-201ENST00000362177 66 ntBASIC2.66□□□□□ -1.98
ZC3H4Q9UPT8 MIR519C-201ENST00000385053 87 ntBASIC2.66□□□□□ -1.98
ZC3H4Q9UPT8 RNU6-519P-201ENST00000410590 108 ntBASIC2.66□□□□□ -1.98
ZC3H4Q9UPT8 SNORA25.3-201ENST00000363205 127 ntBASIC2.65□□□□□ -1.99
ZC3H4Q9UPT8 SNORD115-37-201ENST00000363768 82 ntBASIC2.65□□□□□ -1.99
ZC3H4Q9UPT8 MIR588-201ENST00000384900 83 ntBASIC2.65□□□□□ -1.99
ZC3H4Q9UPT8 SNORA44.1-201ENST00000517031 108 ntBASIC2.65□□□□□ -1.99
ZC3H4Q9UPT8 AP000753.3-201ENST00000604083 169 ntBASIC2.65□□□□□ -1.99
ZC3H4Q9UPT8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.65□□□□□ -1.99
ZC3H4Q9UPT8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
ZC3H4Q9UPT8 Z82195.2-201ENST00000612348 18351 ntBASIC2.65□□□□□ -1.99
ZC3H4Q9UPT8 RNU6-949P-201ENST00000384040 107 ntBASIC2.64□□□□□ -1.99
ZC3H4Q9UPT8 MIR489-201ENST00000384923 84 ntBASIC2.64□□□□□ -1.99
ZC3H4Q9UPT8 SNORD41-201ENST00000386967 70 ntBASIC2.64□□□□□ -1.99
ZC3H4Q9UPT8 SNORA48.3-201ENST00000391081 134 ntBASIC2.64□□□□□ -1.99
ZC3H4Q9UPT8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.64□□□□□ -1.99
ZC3H4Q9UPT8 RNU6-613P-201ENST00000410412 108 ntBASIC2.64□□□□□ -1.99
ZC3H4Q9UPT8 JTBP1-201ENST00000441314 247 ntBASIC2.64□□□□□ -1.99
ZC3H4Q9UPT8 RNU6-947P-201ENST00000516264 106 ntBASIC2.64□□□□□ -1.99
ZC3H4Q9UPT8 U6.109-201ENST00000636749 87 ntBASIC2.64□□□□□ -1.99
ZC3H4Q9UPT8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 SNORA25.9-201ENST00000365087 128 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 Y_RNA.316-201ENST00000365118 111 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 RNU6-1296P-201ENST00000383879 107 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 RNU6-524P-201ENST00000384270 107 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 MIR676-201ENST00000390702 67 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 SNORA17.3-201ENST00000391159 129 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 AL356379.1-201ENST00000414105 126 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 MIR4500-201ENST00000579472 76 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 MIR4713-201ENST00000582691 75 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 MIR3192-201ENST00000584920 77 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 AL359821.1-201ENST00000605519 182 ntBASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
ZC3H4Q9UPT8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 MIR21-201ENST00000362134 72 ntBASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 Y_RNA.57-201ENST00000362806 113 ntBASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 AC244023.1-201ENST00000426884 112 ntBASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 snoU13.2-201ENST00000459201 104 ntBASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 AL357312.1-201ENST00000603879 298 ntBASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 AC242498.1-201ENST00000604134 111 ntBASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 PRELID3BP2-201ENST00000605362 201 ntBASIC2.62□□□□□ -1.99
ZC3H4Q9UPT8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZC3H4Q9UPT8 RNY1P2-201ENST00000364820 117 ntBASIC2.61□□□□□ -1.99
ZC3H4Q9UPT8 RNU6-205P-201ENST00000390858 107 ntBASIC2.61□□□□□ -1.99
ZC3H4Q9UPT8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.61□□□□□ -1.99
ZC3H4Q9UPT8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.61□□□□□ -1.99
ZC3H4Q9UPT8 MIR8066-201ENST00000617280 78 ntBASIC2.61□□□□□ -1.99
ZC3H4Q9UPT8 HSBP1P2-201ENST00000299671 229 ntBASIC2.6□□□□□ -1.99
ZC3H4Q9UPT8 RNU6-396P-201ENST00000365369 105 ntBASIC2.6□□□□□ -1.99
ZC3H4Q9UPT8 RNA5SP489-201ENST00000410986 109 ntBASIC2.6□□□□□ -1.99
ZC3H4Q9UPT8 snoU13.18-201ENST00000459483 104 ntBASIC2.6□□□□□ -1.99
ZC3H4Q9UPT8 AC019288.1-201ENST00000557918 224 ntBASIC2.6□□□□□ -1.99
ZC3H4Q9UPT8 AL096861.1-201ENST00000610899 123 ntBASIC2.6□□□□□ -1.99
ZC3H4Q9UPT8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ZC3H4Q9UPT8 RNU4-32P-201ENST00000363404 141 ntBASIC2.59□□□□□ -2
ZC3H4Q9UPT8 AC093729.1-201ENST00000513074 128 ntBASIC2.59□□□□□ -2
ZC3H4Q9UPT8 AC138749.4-201ENST00000563970 127 ntBASIC2.59□□□□□ -2
ZC3H4Q9UPT8 SNORA4-201ENST00000584302 138 ntBASIC2.59□□□□□ -2
ZC3H4Q9UPT8 AL161722.3-201ENST00000605789 2983 ntBASIC2.59□□□□□ -2
ZC3H4Q9UPT8 RNA5SP133-201ENST00000363368 119 ntBASIC2.58□□□□□ -2
ZC3H4Q9UPT8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
ZC3H4Q9UPT8 AL161935.2-201ENST00000414627 60 ntBASIC2.58□□□□□ -2
ZC3H4Q9UPT8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.58□□□□□ -2
ZC3H4Q9UPT8 AL096840.1-201ENST00000603287 93 ntBASIC2.58□□□□□ -2
ZC3H4Q9UPT8 MIR6740-201ENST00000618268 113 ntBASIC2.58□□□□□ -2
ZC3H4Q9UPT8 MIR4662A-201ENST00000637499 67 ntBASIC2.58□□□□□ -2
ZC3H4Q9UPT8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
ZC3H4Q9UPT8 MIR889-201ENST00000401280 79 ntBASIC2.57□□□□□ -2
ZC3H4Q9UPT8 BX276092.1-201ENST00000427368 251 ntBASIC2.57□□□□□ -2
ZC3H4Q9UPT8 HSPE1P24-201ENST00000450782 238 ntBASIC2.57□□□□□ -2
ZC3H4Q9UPT8 AC023790.1-201ENST00000482174 347 ntBASIC2.57□□□□□ -2
ZC3H4Q9UPT8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
ZC3H4Q9UPT8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZC3H4Q9UPT8 RNU4-83P-201ENST00000410863 133 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms