Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 RNU6-1165P-201ENST00000410119 107 ntBASIC2.17□□□□□ -2.06
TRIM33Q9UPN9 AC073261.1-201ENST00000429409 121 ntBASIC2.17□□□□□ -2.06
TRIM33Q9UPN9 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
TRIM33Q9UPN9 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
TRIM33Q9UPN9 MIR4672-201ENST00000583126 81 ntBASIC2.17□□□□□ -2.06
TRIM33Q9UPN9 U6.109-201ENST00000636749 87 ntBASIC2.17□□□□□ -2.06
TRIM33Q9UPN9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM33Q9UPN9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM33Q9UPN9 RNU6-315P-201ENST00000362666 107 ntBASIC2.16□□□□□ -2.06
TRIM33Q9UPN9 RNA5SP68-201ENST00000363885 119 ntBASIC2.16□□□□□ -2.06
TRIM33Q9UPN9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TRIM33Q9UPN9 Y_RNA.648-201ENST00000459455 110 ntBASIC2.16□□□□□ -2.06
TRIM33Q9UPN9 AC025033.1-201ENST00000463883 194 ntBASIC2.16□□□□□ -2.06
TRIM33Q9UPN9 RNA5SP148-201ENST00000516527 94 ntBASIC2.16□□□□□ -2.06
TRIM33Q9UPN9 SNORA77B-201ENST00000578179 125 ntBASIC2.16□□□□□ -2.06
TRIM33Q9UPN9 MIR3162-201ENST00000581818 82 ntBASIC2.16□□□□□ -2.06
TRIM33Q9UPN9 Y_RNA.119-201ENST00000363301 96 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 MT-TF-201ENST00000387314 71 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 AC244636.1-201ENST00000421152 228 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 RN7SL274P-201ENST00000492268 272 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 RNU11-2P-201ENST00000516898 142 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 AP003716.2-201ENST00000528260 108 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 MIR4299-201ENST00000577899 72 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 AC046143.2-201ENST00000609789 160 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
TRIM33Q9UPN9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
TRIM33Q9UPN9 MIR377-201ENST00000362145 69 ntBASIC2.14□□□□□ -2.07
TRIM33Q9UPN9 SNORA25.3-201ENST00000363205 127 ntBASIC2.14□□□□□ -2.07
TRIM33Q9UPN9 SNORA25.13-201ENST00000516395 103 ntBASIC2.14□□□□□ -2.07
TRIM33Q9UPN9 MIR4513-201ENST00000581077 86 ntBASIC2.14□□□□□ -2.07
TRIM33Q9UPN9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
TRIM33Q9UPN9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM33Q9UPN9 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
TRIM33Q9UPN9 RNU7-85P-201ENST00000458851 63 ntBASIC2.13□□□□□ -2.07
TRIM33Q9UPN9 RNU7-62P-201ENST00000458856 62 ntBASIC2.13□□□□□ -2.07
TRIM33Q9UPN9 snoU13.25-201ENST00000458945 104 ntBASIC2.13□□□□□ -2.07
TRIM33Q9UPN9 RPL30P7-201ENST00000479312 323 ntBASIC2.13□□□□□ -2.07
TRIM33Q9UPN9 RNU7-153P-201ENST00000516455 62 ntBASIC2.13□□□□□ -2.07
TRIM33Q9UPN9 RNA5SP364-201ENST00000516938 78 ntBASIC2.13□□□□□ -2.07
TRIM33Q9UPN9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 RNU4-82P-201ENST00000362443 140 ntBASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 RNU4-32P-201ENST00000363404 141 ntBASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 RNU6-129P-201ENST00000391022 107 ntBASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 SNORA11.2-201ENST00000408318 127 ntBASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 BX276092.1-201ENST00000427368 251 ntBASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM33Q9UPN9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 RNU6-624P-201ENST00000363411 107 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 SNORA72.6-201ENST00000384520 129 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 RNU6-205P-201ENST00000390858 107 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 RNA5SP508-201ENST00000411327 119 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 AL133373.1-201ENST00000497098 94 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 MIR4435-1-201ENST00000582552 80 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 MIR4713-201ENST00000582691 75 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 AL627230.6-201ENST00000611129 280 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 MIR8074-201ENST00000615081 81 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 MIR6516-201ENST00000630554 81 ntBASIC2.11□□□□□ -2.07
TRIM33Q9UPN9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.1□□□□□ -2.07
TRIM33Q9UPN9 AC145423.2-201ENST00000610631 239 ntBASIC2.1□□□□□ -2.07
TRIM33Q9UPN9 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
TRIM33Q9UPN9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
TRIM33Q9UPN9 AL359851.1-201ENST00000569460 4997 ntBASIC2.09□□□□□ -2.07
TRIM33Q9UPN9 AC245517.4-201ENST00000448601 281 ntBASIC2.09□□□□□ -2.07
TRIM33Q9UPN9 AC008413.1-201ENST00000511864 177 ntBASIC2.09□□□□□ -2.07
TRIM33Q9UPN9 Y_RNA.508-201ENST00000384502 114 ntBASIC2.08□□□□□ -2.08
TRIM33Q9UPN9 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
TRIM33Q9UPN9 MIR1185-1-201ENST00000408598 86 ntBASIC2.08□□□□□ -2.08
TRIM33Q9UPN9 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
TRIM33Q9UPN9 snoU13.11-201ENST00000459219 104 ntBASIC2.08□□□□□ -2.08
TRIM33Q9UPN9 RNU6-557P-201ENST00000516842 110 ntBASIC2.08□□□□□ -2.08
TRIM33Q9UPN9 uc_338.6-201ENST00000613544 171 ntBASIC2.08□□□□□ -2.08
TRIM33Q9UPN9 SNORD36A-201ENST00000362874 73 ntBASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 RNU6-478P-201ENST00000363904 110 ntBASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 RNU6-1229P-201ENST00000364295 107 ntBASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 RNU6-580P-201ENST00000365159 107 ntBASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 RNU6-1254P-201ENST00000391266 104 ntBASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 MIR889-201ENST00000401280 79 ntBASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 AC005908.1-201ENST00000468701 347 ntBASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 RNU6-947P-201ENST00000516264 106 ntBASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM33Q9UPN9 MIR103A2-201ENST00000362154 78 ntBASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 RNA5SP264-201ENST00000363115 107 ntBASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 RNU4-58P-201ENST00000363192 141 ntBASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 RNU6-53P-201ENST00000365367 106 ntBASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 MIR18B-201ENST00000454574 71 ntBASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 AC139453.2-201ENST00000487255 133 ntBASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 SNRPGP19-201ENST00000603826 189 ntBASIC2.06□□□□□ -2.08
TRIM33Q9UPN9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 RNU6-1094P-201ENST00000362416 104 ntBASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 RNU6-811P-201ENST00000384069 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 255.5 ms