Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 Y_RNA.168-201ENST00000363740 102 ntBASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 Y_RNA.221-201ENST00000364248 96 ntBASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 RNU6-480P-201ENST00000384332 107 ntBASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 MIR588-201ENST00000384900 83 ntBASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 RNA5SP338-201ENST00000410495 85 ntBASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 AC090897.1-201ENST00000580909 226 ntBASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.09□□□□□ -2.07
AP4E1Q9UPM8 SNORA25.3-201ENST00000363205 127 ntBASIC2.08□□□□□ -2.08
AP4E1Q9UPM8 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
AP4E1Q9UPM8 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
AP4E1Q9UPM8 HSPE1P24-201ENST00000450782 238 ntBASIC2.08□□□□□ -2.08
AP4E1Q9UPM8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.08□□□□□ -2.08
AP4E1Q9UPM8 GHRLOS.1-201ENST00000610995 70 ntBASIC2.08□□□□□ -2.08
AP4E1Q9UPM8 MIR30D-201ENST00000362283 70 ntBASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 Y_RNA.316-201ENST00000365118 111 ntBASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 AC244636.1-201ENST00000421152 228 ntBASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 AC087499.7-201ENST00000441958 109 ntBASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 MIR4264-201ENST00000583520 66 ntBASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
AP4E1Q9UPM8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 RNU6-396P-201ENST00000365369 105 ntBASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 RNU6-652P-201ENST00000365488 107 ntBASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 RNU6-524P-201ENST00000384270 107 ntBASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 RNU6-24P-201ENST00000384440 107 ntBASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 RNU4-83P-201ENST00000410863 133 ntBASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 AP003716.2-201ENST00000528260 108 ntBASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 SNORA4-201ENST00000584302 138 ntBASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 AP000753.3-201ENST00000604083 169 ntBASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.06□□□□□ -2.08
AP4E1Q9UPM8 MIR519C-201ENST00000385053 87 ntBASIC2.05□□□□□ -2.08
AP4E1Q9UPM8 MT-TN-201ENST00000387400 73 ntBASIC2.05□□□□□ -2.08
AP4E1Q9UPM8 MIR4287-201ENST00000579398 78 ntBASIC2.05□□□□□ -2.08
AP4E1Q9UPM8 MIR4648-201ENST00000580107 72 ntBASIC2.05□□□□□ -2.08
AP4E1Q9UPM8 uc_338.6-201ENST00000613544 171 ntBASIC2.05□□□□□ -2.08
AP4E1Q9UPM8 U6.109-201ENST00000636749 87 ntBASIC2.05□□□□□ -2.08
AP4E1Q9UPM8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 RNU6-1165P-201ENST00000410119 107 ntBASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 MIR4713-201ENST00000582691 75 ntBASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 AC008163.1-202ENST00000636004 2889 ntBASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
AP4E1Q9UPM8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 RNU6-1296P-201ENST00000383879 107 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 MIR504-201ENST00000385065 83 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 RNU6-205P-201ENST00000390858 107 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 MIR1185-1-201ENST00000408598 86 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 RNU7-62P-201ENST00000458856 62 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 snoU13.26-201ENST00000459452 105 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 MIR2115-201ENST00000516657 100 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
AP4E1Q9UPM8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
AP4E1Q9UPM8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
AP4E1Q9UPM8 MIR377-201ENST00000362145 69 ntBASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 RNA5SP432-201ENST00000362480 116 ntBASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 Y_RNA.94-201ENST00000363068 106 ntBASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 RNU6-519P-201ENST00000410590 108 ntBASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 RNU6-850P-201ENST00000516934 103 ntBASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 AC019288.1-201ENST00000557918 224 ntBASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 MIR8066-201ENST00000617280 78 ntBASIC2.02□□□□□ -2.09
AP4E1Q9UPM8 MIR302D-201ENST00000362275 68 ntBASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 Y_RNA.57-201ENST00000362806 113 ntBASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 RNU6-571P-201ENST00000384128 107 ntBASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 MT-TF-201ENST00000387314 71 ntBASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 MIR4500-201ENST00000579472 76 ntBASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 MIR7843-201ENST00000622274 79 ntBASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 MIR6516-201ENST00000630554 81 ntBASIC2.01□□□□□ -2.09
AP4E1Q9UPM8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
AP4E1Q9UPM8 Y_RNA.119-201ENST00000363301 96 ntBASIC2□□□□□ -2.09
AP4E1Q9UPM8 AC245517.4-201ENST00000448601 281 ntBASIC2□□□□□ -2.09
AP4E1Q9UPM8 SNORD4B-201ENST00000459083 72 ntBASIC2□□□□□ -2.09
AP4E1Q9UPM8 RPL30P7-201ENST00000479312 323 ntBASIC2□□□□□ -2.09
AP4E1Q9UPM8 AC093729.1-201ENST00000513074 128 ntBASIC2□□□□□ -2.09
AP4E1Q9UPM8 RNU1-41P-201ENST00000516161 162 ntBASIC2□□□□□ -2.09
AP4E1Q9UPM8 RNU1-48P-201ENST00000516400 162 ntBASIC2□□□□□ -2.09
AP4E1Q9UPM8 AC140658.3-201ENST00000567603 271 ntBASIC2□□□□□ -2.09
AP4E1Q9UPM8 MIR4712-201ENST00000583750 82 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms