Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MIR3202-2-201ENST00000635980 79 ntBASIC2.16□□□□□ -2.06
CNTN3Q9P232 RNU6-219P-201ENST00000364728 107 ntBASIC2.15□□□□□ -2.07
CNTN3Q9P232 RNU6-1276P-201ENST00000365372 104 ntBASIC2.15□□□□□ -2.07
CNTN3Q9P232 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
CNTN3Q9P232 MIR5089-201ENST00000580047 84 ntBASIC2.15□□□□□ -2.07
CNTN3Q9P232 SNORA4-201ENST00000584302 138 ntBASIC2.15□□□□□ -2.07
CNTN3Q9P232 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CNTN3Q9P232 SNORA25.3-201ENST00000363205 127 ntBASIC2.14□□□□□ -2.07
CNTN3Q9P232 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
CNTN3Q9P232 HMGN2P23-201ENST00000456759 269 ntBASIC2.14□□□□□ -2.07
CNTN3Q9P232 AP003716.2-201ENST00000528260 108 ntBASIC2.14□□□□□ -2.07
CNTN3Q9P232 MIR8063-201ENST00000621930 81 ntBASIC2.14□□□□□ -2.07
CNTN3Q9P232 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CNTN3Q9P232 Y_RNA.168-201ENST00000363740 102 ntBASIC2.13□□□□□ -2.07
CNTN3Q9P232 U8.13-201ENST00000390842 128 ntBASIC2.13□□□□□ -2.07
CNTN3Q9P232 RNU6-638P-201ENST00000516582 104 ntBASIC2.13□□□□□ -2.07
CNTN3Q9P232 MIR5588-201ENST00000581890 63 ntBASIC2.13□□□□□ -2.07
CNTN3Q9P232 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
CNTN3Q9P232 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
CNTN3Q9P232 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CNTN3Q9P232 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CNTN3Q9P232 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CNTN3Q9P232 MIR377-201ENST00000362145 69 ntBASIC2.12□□□□□ -2.07
CNTN3Q9P232 RNU6-979P-201ENST00000383896 107 ntBASIC2.12□□□□□ -2.07
CNTN3Q9P232 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
CNTN3Q9P232 RNY1P4-201ENST00000384595 115 ntBASIC2.12□□□□□ -2.07
CNTN3Q9P232 RNU6-1165P-201ENST00000410119 107 ntBASIC2.12□□□□□ -2.07
CNTN3Q9P232 RPL30P7-201ENST00000479312 323 ntBASIC2.12□□□□□ -2.07
CNTN3Q9P232 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.12□□□□□ -2.07
CNTN3Q9P232 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.12□□□□□ -2.07
CNTN3Q9P232 MIR6740-201ENST00000618268 113 ntBASIC2.12□□□□□ -2.07
CNTN3Q9P232 MIR7843-201ENST00000622274 79 ntBASIC2.12□□□□□ -2.07
CNTN3Q9P232 MIR302D-201ENST00000362275 68 ntBASIC2.11□□□□□ -2.07
CNTN3Q9P232 MIR30D-201ENST00000362283 70 ntBASIC2.11□□□□□ -2.07
CNTN3Q9P232 Y_RNA.426-201ENST00000384068 113 ntBASIC2.11□□□□□ -2.07
CNTN3Q9P232 RNU6-1065P-201ENST00000384513 106 ntBASIC2.11□□□□□ -2.07
CNTN3Q9P232 MT-TF-201ENST00000387314 71 ntBASIC2.11□□□□□ -2.07
CNTN3Q9P232 RNU7-62P-201ENST00000458856 62 ntBASIC2.11□□□□□ -2.07
CNTN3Q9P232 AC079140.2-201ENST00000506193 142 ntBASIC2.11□□□□□ -2.07
CNTN3Q9P232 RNU6-267P-201ENST00000516714 103 ntBASIC2.11□□□□□ -2.07
CNTN3Q9P232 SNRPGP19-201ENST00000603826 189 ntBASIC2.11□□□□□ -2.07
CNTN3Q9P232 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.11□□□□□ -2.07
CNTN3Q9P232 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
CNTN3Q9P232 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CNTN3Q9P232 Y_RNA.73-201ENST00000362910 113 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 RNA5SP264-201ENST00000363115 107 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 SNORD1A-201ENST00000364968 72 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 RNU6-497P-201ENST00000365316 104 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 SNORA2B-201ENST00000384583 137 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 MIR181B2-201ENST00000385004 89 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 MIR934-201ENST00000401241 83 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 RNU6-613P-201ENST00000410412 108 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 AL161932.1-201ENST00000437408 146 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 snoU13.25-201ENST00000458945 104 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 RNU7-171P-201ENST00000459581 62 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
CNTN3Q9P232 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CNTN3Q9P232 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CNTN3Q9P232 MIR103A2-201ENST00000362154 78 ntBASIC2.09□□□□□ -2.07
CNTN3Q9P232 RNU6-633P-201ENST00000362612 103 ntBASIC2.09□□□□□ -2.07
CNTN3Q9P232 Y_RNA.609-201ENST00000410669 89 ntBASIC2.09□□□□□ -2.07
CNTN3Q9P232 AC138749.4-201ENST00000563970 127 ntBASIC2.09□□□□□ -2.07
CNTN3Q9P232 AL513043.2-201ENST00000573941 143 ntBASIC2.09□□□□□ -2.07
CNTN3Q9P232 MIR4422-201ENST00000581938 83 ntBASIC2.09□□□□□ -2.07
CNTN3Q9P232 MIR6516-201ENST00000630554 81 ntBASIC2.09□□□□□ -2.07
CNTN3Q9P232 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CNTN3Q9P232 RNU6-1124P-201ENST00000384169 107 ntBASIC2.08□□□□□ -2.08
CNTN3Q9P232 RNU6-205P-201ENST00000390858 107 ntBASIC2.08□□□□□ -2.08
CNTN3Q9P232 MIR1185-1-201ENST00000408598 86 ntBASIC2.08□□□□□ -2.08
CNTN3Q9P232 snoU13.23-201ENST00000458863 104 ntBASIC2.08□□□□□ -2.08
CNTN3Q9P232 RNU6-295P-201ENST00000516901 104 ntBASIC2.08□□□□□ -2.08
CNTN3Q9P232 MIR4500-201ENST00000579472 76 ntBASIC2.08□□□□□ -2.08
CNTN3Q9P232 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
CNTN3Q9P232 MIR8066-201ENST00000617280 78 ntBASIC2.08□□□□□ -2.08
CNTN3Q9P232 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CNTN3Q9P232 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CNTN3Q9P232 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CNTN3Q9P232 AC008163.1-202ENST00000636004 2889 ntBASIC2.07□□□□□ -2.08
CNTN3Q9P232 RNU6-509P-201ENST00000363519 107 ntBASIC2.07□□□□□ -2.08
CNTN3Q9P232 RNU6-580P-201ENST00000365159 107 ntBASIC2.07□□□□□ -2.08
CNTN3Q9P232 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CNTN3Q9P232 MIR764-201ENST00000390811 85 ntBASIC2.07□□□□□ -2.08
CNTN3Q9P232 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.07□□□□□ -2.08
CNTN3Q9P232 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.07□□□□□ -2.08
CNTN3Q9P232 AC090897.1-201ENST00000580909 226 ntBASIC2.07□□□□□ -2.08
CNTN3Q9P232 MIR3124-201ENST00000582636 67 ntBASIC2.07□□□□□ -2.08
CNTN3Q9P232 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.07□□□□□ -2.08
CNTN3Q9P232 RNU6-571P-201ENST00000384128 107 ntBASIC2.06□□□□□ -2.08
CNTN3Q9P232 MIR583-201ENST00000384846 75 ntBASIC2.06□□□□□ -2.08
CNTN3Q9P232 SNORA26.9-201ENST00000391322 122 ntBASIC2.06□□□□□ -2.08
CNTN3Q9P232 AL591806.2-201ENST00000433122 173 ntBASIC2.06□□□□□ -2.08
CNTN3Q9P232 SNRPGP12-201ENST00000449481 213 ntBASIC2.06□□□□□ -2.08
CNTN3Q9P232 MIR18B-201ENST00000454574 71 ntBASIC2.06□□□□□ -2.08
CNTN3Q9P232 MIR4666B-201ENST00000578142 81 ntBASIC2.06□□□□□ -2.08
CNTN3Q9P232 U6.109-201ENST00000636749 87 ntBASIC2.06□□□□□ -2.08
CNTN3Q9P232 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
CNTN3Q9P232 RNU6-228P-201ENST00000362700 106 ntBASIC2.05□□□□□ -2.08
CNTN3Q9P232 Y_RNA.119-201ENST00000363301 96 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms