Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.171-201ENST00000363760 102 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.459-201ENST00000384251 102 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.571-201ENST00000384753 98 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 RNU7-113P-201ENST00000459273 62 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 RNU7-79P-201ENST00000516082 62 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 RNU6-1258P-201ENST00000516911 111 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 RNA5SP47-201ENST00000517230 109 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 MIR4639-201ENST00000584938 69 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.07□□□□□ -2.4
SMPD3Q9NY59 MIR6828-201ENST00000636181 60 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 AC091304.10-201ENST00000641554 121 ntBASIC0.07□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.65-201ENST00000362846 100 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 RNU6-30P-201ENST00000384561 107 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.562-201ENST00000384695 113 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 SNORD28-201ENST00000384706 75 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 RNA5SP144-201ENST00000410846 116 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 AL022718.1-201ENST00000412004 84 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 MTND2P23-201ENST00000422990 651 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 AC069271.1-201ENST00000445577 156 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 RNU6-1194P-201ENST00000516208 104 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
SMPD3Q9NY59 MIR6755-201ENST00000619993 66 ntBASIC0.06□□□□□ -2.4
SMPD3Q9NY59 SNORA9.1-201ENST00000362412 131 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 RNU4-58P-201ENST00000363192 141 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 RNU6-275P-201ENST00000364910 107 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.521-201ENST00000384560 114 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.549-201ENST00000384657 102 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.626-201ENST00000411288 95 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 RNU7-35P-201ENST00000517174 62 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
SMPD3Q9NY59 MRPS18CP4-201ENST00000535821 231 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 MIR5589-201ENST00000579442 60 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 MIR4308-201ENST00000580634 81 ntBASIC0.05□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.470-201ENST00000384307 117 ntBASIC0.04□□□□□ -2.4
SMPD3Q9NY59 RNU6-738P-201ENST00000384531 106 ntBASIC0.04□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.556-201ENST00000384677 113 ntBASIC0.04□□□□□ -2.4
SMPD3Q9NY59 MIRLET7F2-201ENST00000385277 83 ntBASIC0.04□□□□□ -2.4
SMPD3Q9NY59 RNU6-531P-201ENST00000516694 104 ntBASIC0.04□□□□□ -2.4
SMPD3Q9NY59 AC244669.1-204ENST00000621564 178 ntBASIC0.04□□□□□ -2.4
SMPD3Q9NY59 SNORD114-31-201ENST00000363219 75 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 RNA5SP133-201ENST00000363368 119 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 RNU6-1336P-201ENST00000383886 109 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.423-201ENST00000384057 113 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 RNU6-187P-201ENST00000384139 106 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 Y_RNA.477-201ENST00000384352 108 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 HAR1A.1-201ENST00000459583 118 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 RNA5SP33-201ENST00000516687 98 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 MIR5190-201ENST00000581537 80 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 U6.109-201ENST00000636749 87 ntBASIC0.03□□□□□ -2.4
SMPD3Q9NY59 MIR101-2-201ENST00000362195 79 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 Y_RNA.52-201ENST00000362760 96 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 RNA5SP368-201ENST00000364298 116 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 RNU6-46P-201ENST00000383860 107 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 SNORA32-201ENST00000384072 121 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 RNU6V-201ENST00000384105 107 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 MIR1302-3-201ENST00000408128 138 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 snoU13.19-201ENST00000459148 104 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.02□□□□□ -2.41
SMPD3Q9NY59 RNU6-848P-201ENST00000515948 107 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 RNU6-617P-201ENST00000516147 107 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 RNU6-473P-201ENST00000516164 107 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 RNU6-1049P-201ENST00000516414 107 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 IGLVI-20-201ENST00000519296 130 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 TUG1_4.1-201ENST00000619464 181 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 U6.106-201ENST00000636360 105 ntBASIC0.02□□□□□ -2.41
SMPD3Q9NY59 MIR411-201ENST00000362239 96 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 Y_RNA.20-201ENST00000362479 113 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 SNORD115-2-201ENST00000362842 82 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 Y_RNA.75-201ENST00000362927 97 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 SNORD115-20-201ENST00000365099 82 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 RNU6-690P-201ENST00000365242 106 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 Y_RNA.350-201ENST00000365409 98 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 RNU6-1126P-201ENST00000384002 107 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 Y_RNA.478-201ENST00000384358 107 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
SMPD3Q9NY59 SNORD58.1-201ENST00000391313 66 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 PCNPP3-201ENST00000393579 471 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 RNU7-129P-201ENST00000516128 62 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 MIR4636-201ENST00000582271 80 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.01□□□□□ -2.41
SMPD3Q9NY59 Y_RNA.120-201ENST00000363304 110 ntBASIC0□□□□□ -2.41
SMPD3Q9NY59 MIR760-201ENST00000390220 80 ntBASIC0□□□□□ -2.41
SMPD3Q9NY59 MTCYBP9-201ENST00000431021 303 ntBASIC0□□□□□ -2.41
SMPD3Q9NY59 RNU4-71P-201ENST00000516258 113 ntBASIC0□□□□□ -2.41
SMPD3Q9NY59 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
SMPD3Q9NY59 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
SMPD3Q9NY59 MIR6759-201ENST00000638110 65 ntBASIC0□□□□□ -2.41
SMPD3Q9NY59 SNORA63.5-201ENST00000363548 123 ntBASIC-0.01□□□□□ -2.41
SMPD3Q9NY59 RNA5SP245-201ENST00000364239 121 ntBASIC-0.01□□□□□ -2.41
SMPD3Q9NY59 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.01□□□□□ -2.41
SMPD3Q9NY59 RNA5SP236-201ENST00000516169 116 ntBASIC-0.01□□□□□ -2.41
SMPD3Q9NY59 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.01□□□□□ -2.41
SMPD3Q9NY59 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms