Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNU6-447P-201ENST00000410293 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-355P-201ENST00000410427 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-791P-201ENST00000410467 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-705P-201ENST00000410601 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-1100P-201ENST00000410691 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-860P-201ENST00000410860 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU4-83P-201ENST00000410863 133 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-1135P-201ENST00000411083 103 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU6-785P-201ENST00000411324 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 AL512326.2-201ENST00000426359 151 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RPL39P25-201ENST00000449384 154 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.651-201ENST00000459380 103 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 RNU2-35P-201ENST00000516446 142 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.686-201ENST00000516548 134 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 AC090897.1-201ENST00000580909 226 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 U6.90-201ENST00000614007 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 U6.70-201ENST00000620287 104 ntBASIC0.44□□□□□ -2.34
HPS4Q9NQG7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.43□□□□□ -2.34
HPS4Q9NQG7 RNY1P13-201ENST00000365030 105 ntBASIC0.43□□□□□ -2.34
HPS4Q9NQG7 RNU6-1318P-201ENST00000365389 103 ntBASIC0.43□□□□□ -2.34
HPS4Q9NQG7 RNU6-1130P-201ENST00000365434 107 ntBASIC0.43□□□□□ -2.34
HPS4Q9NQG7 RNU6-949P-201ENST00000384040 107 ntBASIC0.43□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.588-201ENST00000391254 102 ntBASIC0.43□□□□□ -2.34
HPS4Q9NQG7 RNU7-113P-201ENST00000459273 62 ntBASIC0.43□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.700-201ENST00000516806 100 ntBASIC0.43□□□□□ -2.34
HPS4Q9NQG7 AC090425.1-201ENST00000610007 140 ntBASIC0.43□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 RNU6-403P-201ENST00000363163 104 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.120-201ENST00000363304 110 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.251-201ENST00000364551 99 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 RNU6-309P-201ENST00000364573 106 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 RNU4-11P-201ENST00000365287 132 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 SNORA32-201ENST00000384072 121 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 SNORD100-201ENST00000408573 76 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 AL022718.1-201ENST00000412004 84 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 AC002350.1-201ENST00000490759 375 ntBASIC0.42□□□□□ -2.34
HPS4Q9NQG7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
HPS4Q9NQG7 RNU4-45P-201ENST00000365469 141 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.374-201ENST00000365606 101 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.584-201ENST00000391090 114 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 PCNPP3-201ENST00000393579 471 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 RNU6-1086P-201ENST00000410930 100 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 RNU6-893P-201ENST00000458841 100 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 RNA5SP33-201ENST00000516687 98 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 AC112693.2-201ENST00000556538 232 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 MIR4491-201ENST00000581087 68 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 MIR4305-201ENST00000583252 102 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 MIR548AE2-201ENST00000583456 67 ntBASIC0.41□□□□□ -2.34
HPS4Q9NQG7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.41□□□□□ -2.34
HPS4Q9NQG7 Y_RNA.150-201ENST00000363562 102 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 RNU6-151P-201ENST00000364158 107 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 SNORA72.6-201ENST00000384520 129 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 MIR1197-201ENST00000408818 88 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 MTATP6P21-201ENST00000440681 189 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 RNU7-197P-201ENST00000458836 62 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 MIR1270-201ENST00000459320 83 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 RNU7-123P-201ENST00000515911 60 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 RNU7-79P-201ENST00000516082 62 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 Y_RNA.690-201ENST00000516603 95 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 SNORA25.16-201ENST00000516741 121 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 RNU6-448P-201ENST00000517052 107 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 RNU7-35P-201ENST00000517174 62 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 AC133485.4-201ENST00000561835 220 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 AC138907.4-201ENST00000570107 226 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 AC021443.1-201ENST00000604478 211 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 AC011603.4-201ENST00000611325 277 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 MIR6082-201ENST00000613604 109 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 AL109933.3-201ENST00000619095 188 ntBASIC0.4□□□□□ -2.35
HPS4Q9NQG7 SNORD115-2-201ENST00000362842 82 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 SNORD115-20-201ENST00000365099 82 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 Y_RNA.366-201ENST00000365540 102 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 RNU6-716P-201ENST00000365621 103 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 SNORD116-18-201ENST00000383961 92 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 RNU6-804P-201ENST00000384286 107 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 Y_RNA.531-201ENST00000384589 121 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 RNU6-460P-201ENST00000391158 108 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 RNU7-164P-201ENST00000459221 62 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 RNU5E-3P-201ENST00000515913 68 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 AC108081.1-201ENST00000604358 221 ntBASIC0.39□□□□□ -2.35
HPS4Q9NQG7 SNORD18B-201ENST00000365659 72 ntBASIC0.38□□□□□ -2.35
HPS4Q9NQG7 RNU6-679P-201ENST00000391003 106 ntBASIC0.38□□□□□ -2.35
HPS4Q9NQG7 RNU6-394P-201ENST00000410735 107 ntBASIC0.38□□□□□ -2.35
HPS4Q9NQG7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
HPS4Q9NQG7 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
HPS4Q9NQG7 RNU6-182P-201ENST00000516970 105 ntBASIC0.38□□□□□ -2.35
HPS4Q9NQG7 AC022523.2-201ENST00000561045 150 ntBASIC0.38□□□□□ -2.35
HPS4Q9NQG7 AL359881.1-201ENST00000602916 267 ntBASIC0.38□□□□□ -2.35
HPS4Q9NQG7 Y_RNA.778-201ENST00000620203 90 ntBASIC0.38□□□□□ -2.35
HPS4Q9NQG7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
HPS4Q9NQG7 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
HPS4Q9NQG7 Y_RNA.8-201ENST00000362353 102 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 229.4 ms