Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 U6.90-201ENST00000614007 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 U6.70-201ENST00000620287 104 ntBASIC0.76□□□□□ -2.29
HINT3Q9NQE9 Y_RNA.299-201ENST00000364973 94 ntBASIC0.75□□□□□ -2.29
HINT3Q9NQE9 RNU4-69P-201ENST00000410677 143 ntBASIC0.75□□□□□ -2.29
HINT3Q9NQE9 MTND4LP9-201ENST00000427694 174 ntBASIC0.75□□□□□ -2.29
HINT3Q9NQE9 RNU7-102P-201ENST00000458948 62 ntBASIC0.75□□□□□ -2.29
HINT3Q9NQE9 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
HINT3Q9NQE9 AC022523.2-201ENST00000561045 150 ntBASIC0.75□□□□□ -2.29
HINT3Q9NQE9 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
HINT3Q9NQE9 AC008608.1-201ENST00000603910 127 ntBASIC0.75□□□□□ -2.29
HINT3Q9NQE9 TUG1_4.1-201ENST00000619464 181 ntBASIC0.75□□□□□ -2.29
HINT3Q9NQE9 RNU6-1104P-201ENST00000384723 104 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 MIR573-201ENST00000384964 99 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 SNORA40-201ENST00000388090 126 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 RNU6-257P-201ENST00000410238 98 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
HINT3Q9NQE9 AL158147.1-201ENST00000443970 75 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 MIR1270-201ENST00000459320 83 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 RN7SKP19-201ENST00000516016 252 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 MIR4698-201ENST00000577795 80 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 MIR3973-201ENST00000579824 107 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 MIR4491-201ENST00000581087 68 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 MIR8066-201ENST00000617280 78 ntBASIC0.74□□□□□ -2.29
HINT3Q9NQE9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
HINT3Q9NQE9 RNU6-403P-201ENST00000363163 104 ntBASIC0.73□□□□□ -2.29
HINT3Q9NQE9 RPS29P1-201ENST00000465274 159 ntBASIC0.73□□□□□ -2.29
HINT3Q9NQE9 AC090897.1-201ENST00000580909 226 ntBASIC0.73□□□□□ -2.29
HINT3Q9NQE9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.73□□□□□ -2.29
HINT3Q9NQE9 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
HINT3Q9NQE9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.72□□□□□ -2.29
HINT3Q9NQE9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
HINT3Q9NQE9 SNORD67.1-201ENST00000516618 108 ntBASIC0.72□□□□□ -2.29
HINT3Q9NQE9 Y_RNA.703-201ENST00000516846 111 ntBASIC0.72□□□□□ -2.29
HINT3Q9NQE9 MIR3133-201ENST00000583157 78 ntBASIC0.72□□□□□ -2.29
HINT3Q9NQE9 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
HINT3Q9NQE9 Y_RNA.617-201ENST00000410920 90 ntBASIC0.71□□□□□ -2.3
HINT3Q9NQE9 RNU7-137P-201ENST00000516788 62 ntBASIC0.71□□□□□ -2.3
HINT3Q9NQE9 AL359881.1-201ENST00000602916 267 ntBASIC0.71□□□□□ -2.3
HINT3Q9NQE9 AL078603.1-201ENST00000603824 313 ntBASIC0.71□□□□□ -2.3
HINT3Q9NQE9 MIR6082-201ENST00000613604 109 ntBASIC0.71□□□□□ -2.3
HINT3Q9NQE9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 RNU6-235P-201ENST00000362644 107 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 RNU6-774P-201ENST00000363238 107 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 SNORD114-10-201ENST00000363409 72 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 SNORA72.6-201ENST00000384520 129 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 MIR1263-201ENST00000408324 86 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.7□□□□□ -2.3
HINT3Q9NQE9 MIR3612-201ENST00000579753 87 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.7□□□□□ -2.3
HINT3Q9NQE9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
HINT3Q9NQE9 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
HINT3Q9NQE9 Y_RNA.116-201ENST00000363292 103 ntBASIC0.69□□□□□ -2.3
HINT3Q9NQE9 RNU6-746P-201ENST00000384112 109 ntBASIC0.69□□□□□ -2.3
HINT3Q9NQE9 SNORD77B-201ENST00000391112 67 ntBASIC0.69□□□□□ -2.3
HINT3Q9NQE9 RNA5SP136-201ENST00000410906 107 ntBASIC0.69□□□□□ -2.3
HINT3Q9NQE9 RNU6-448P-201ENST00000517052 107 ntBASIC0.69□□□□□ -2.3
HINT3Q9NQE9 MT-TI-201ENST00000387365 69 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 Y_RNA.586-201ENST00000391146 98 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 SNORD100-201ENST00000408573 76 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 AC002350.1-201ENST00000490759 375 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 RNA5SP220-201ENST00000516298 104 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 RNU6-781P-201ENST00000516377 101 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 SNORA25.16-201ENST00000516741 121 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 RNU6-765P-201ENST00000516916 99 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 AC105081.1-201ENST00000617727 106 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 MIR6788-201ENST00000618842 66 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.68□□□□□ -2.3
HINT3Q9NQE9 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
HINT3Q9NQE9 MIR539-201ENST00000365690 78 ntBASIC0.67□□□□□ -2.3
HINT3Q9NQE9 MIR518E-201ENST00000385252 88 ntBASIC0.67□□□□□ -2.3
HINT3Q9NQE9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
HINT3Q9NQE9 MIR548J-201ENST00000408833 112 ntBASIC0.67□□□□□ -2.3
HINT3Q9NQE9 RNU6-1211P-201ENST00000459179 105 ntBASIC0.67□□□□□ -2.3
HINT3Q9NQE9 COX6CP6-201ENST00000490840 228 ntBASIC0.67□□□□□ -2.3
HINT3Q9NQE9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.67□□□□□ -2.3
HINT3Q9NQE9 AP003327.1-201ENST00000529684 127 ntBASIC0.67□□□□□ -2.3
HINT3Q9NQE9 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
HINT3Q9NQE9 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
HINT3Q9NQE9 MIR151B-201ENST00000584249 96 ntBASIC0.67□□□□□ -2.3
HINT3Q9NQE9 RNA5SP133-201ENST00000363368 119 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 Y_RNA.198-201ENST00000364013 98 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 Y_RNA.213-201ENST00000364178 111 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 SNORD50.2-201ENST00000365465 70 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 MIR613-201ENST00000385248 95 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 RNU6-1061P-201ENST00000516530 99 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 RNU7-6P-201ENST00000516845 62 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 MIR3163-201ENST00000581592 73 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 U6.109-201ENST00000636749 87 ntBASIC0.66□□□□□ -2.3
HINT3Q9NQE9 MIR18A-201ENST00000362310 71 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 RNU4-45P-201ENST00000365469 141 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 SNORA36.2-201ENST00000384004 127 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 RNU6-42P-201ENST00000384165 107 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 RNU6-616P-201ENST00000384353 107 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms