Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.35□□□□□ -2.63
TREM1Q9NP99 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.35□□□□□ -2.63
TREM1Q9NP99 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.35□□□□□ -2.63
TREM1Q9NP99 MIR559-201ENST00000385188 96 ntBASIC-1.35□□□□□ -2.63
TREM1Q9NP99 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.35□□□□□ -2.63
TREM1Q9NP99 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.35□□□□□ -2.63
TREM1Q9NP99 RNU7-30P-201ENST00000516835 62 ntBASIC-1.35□□□□□ -2.63
TREM1Q9NP99 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.35□□□□□ -2.63
TREM1Q9NP99 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.35□□□□□ -2.63
TREM1Q9NP99 SNORD115-25-201ENST00000362619 82 ntBASIC-1.36□□□□□ -2.63
TREM1Q9NP99 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.36□□□□□ -2.63
TREM1Q9NP99 MIR4460-201ENST00000577862 86 ntBASIC-1.36□□□□□ -2.63
TREM1Q9NP99 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.36□□□□□ -2.63
TREM1Q9NP99 MIR8068-201ENST00000618032 68 ntBASIC-1.36□□□□□ -2.63
TREM1Q9NP99 AP000770.2-201ENST00000623694 100 ntBASIC-1.36□□□□□ -2.63
TREM1Q9NP99 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.37□□□□□ -2.63
TREM1Q9NP99 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.37□□□□□ -2.63
TREM1Q9NP99 SNORD115-35-201ENST00000365122 82 ntBASIC-1.37□□□□□ -2.63
TREM1Q9NP99 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.37□□□□□ -2.63
TREM1Q9NP99 SNORD116-1-201ENST00000384335 95 ntBASIC-1.37□□□□□ -2.63
TREM1Q9NP99 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.37□□□□□ -2.63
TREM1Q9NP99 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.37□□□□□ -2.63
TREM1Q9NP99 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.37□□□□□ -2.63
TREM1Q9NP99 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.38□□□□□ -2.63
TREM1Q9NP99 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.38□□□□□ -2.63
TREM1Q9NP99 AC016907.1-201ENST00000419483 435 ntBASIC-1.38□□□□□ -2.63
TREM1Q9NP99 PMCHL1-202ENST00000423102 261 ntBASIC-1.38□□□□□ -2.63
TREM1Q9NP99 RNU6-699P-201ENST00000517081 110 ntBASIC-1.38□□□□□ -2.63
TREM1Q9NP99 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.38□□□□□ -2.63
TREM1Q9NP99 AC006006.1-201ENST00000603082 144 ntBASIC-1.38□□□□□ -2.63
TREM1Q9NP99 AC025253.1-201ENST00000613623 543 ntBASIC-1.38□□□□□ -2.63
TREM1Q9NP99 AC132825.6-201ENST00000638861 357 ntBASIC-1.38□□□□□ -2.63
TREM1Q9NP99 RNU6-973P-201ENST00000364690 107 ntBASIC-1.39□□□□□ -2.63
TREM1Q9NP99 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.39□□□□□ -2.63
TREM1Q9NP99 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.39□□□□□ -2.63
TREM1Q9NP99 MIR617-201ENST00000385030 97 ntBASIC-1.39□□□□□ -2.63
TREM1Q9NP99 AC244090.1-201ENST00000441884 93 ntBASIC-1.39□□□□□ -2.63
TREM1Q9NP99 MTND4P17-201ENST00000470444 350 ntBASIC-1.39□□□□□ -2.63
TREM1Q9NP99 RNA5SP180-201ENST00000516181 101 ntBASIC-1.39□□□□□ -2.63
TREM1Q9NP99 snoU83B.1-201ENST00000517136 88 ntBASIC-1.39□□□□□ -2.63
TREM1Q9NP99 SNORA40.17-201ENST00000517256 115 ntBASIC-1.39□□□□□ -2.63
TREM1Q9NP99 RNU6-524P-201ENST00000384270 107 ntBASIC-1.4□□□□□ -2.63
TREM1Q9NP99 MIR652-201ENST00000385278 98 ntBASIC-1.4□□□□□ -2.63
TREM1Q9NP99 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.4□□□□□ -2.63
TREM1Q9NP99 RNU7-195P-201ENST00000458793 62 ntBASIC-1.4□□□□□ -2.63
TREM1Q9NP99 RNU7-137P-201ENST00000516788 62 ntBASIC-1.4□□□□□ -2.63
TREM1Q9NP99 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.4□□□□□ -2.63
TREM1Q9NP99 AC024909.2-201ENST00000553035 286 ntBASIC-1.4□□□□□ -2.63
TREM1Q9NP99 MIR5591-201ENST00000578248 65 ntBASIC-1.4□□□□□ -2.63
TREM1Q9NP99 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.4□□□□□ -2.63
TREM1Q9NP99 MIR3129-201ENST00000581095 76 ntBASIC-1.4□□□□□ -2.63
TREM1Q9NP99 MIR409-201ENST00000362237 79 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 SNORA53-201ENST00000391141 249 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 MTND4LP30-201ENST00000454092 297 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 RNU6-507P-201ENST00000516045 100 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 RNU6-479P-201ENST00000516348 105 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 SNORA40.14-201ENST00000516543 86 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 SNORD116.3-201ENST00000517176 78 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 AL359881.1-201ENST00000602916 267 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 MIR6854-201ENST00000614935 69 ntBASIC-1.41□□□□□ -2.64
TREM1Q9NP99 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.42□□□□□ -2.64
TREM1Q9NP99 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.42□□□□□ -2.64
TREM1Q9NP99 RNU6-905P-201ENST00000384434 107 ntBASIC-1.42□□□□□ -2.64
TREM1Q9NP99 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.42□□□□□ -2.64
TREM1Q9NP99 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.42□□□□□ -2.64
TREM1Q9NP99 MIR4770-201ENST00000579149 58 ntBASIC-1.42□□□□□ -2.64
TREM1Q9NP99 AC103591.3-201ENST00000608684 209 ntBASIC-1.42□□□□□ -2.64
TREM1Q9NP99 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.43□□□□□ -2.64
TREM1Q9NP99 SNORD114-10-201ENST00000363409 72 ntBASIC-1.43□□□□□ -2.64
TREM1Q9NP99 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.43□□□□□ -2.64
TREM1Q9NP99 RNU6-476P-201ENST00000384726 107 ntBASIC-1.43□□□□□ -2.64
TREM1Q9NP99 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.43□□□□□ -2.64
TREM1Q9NP99 SNORD67.1-201ENST00000516618 108 ntBASIC-1.43□□□□□ -2.64
TREM1Q9NP99 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.43□□□□□ -2.64
TREM1Q9NP99 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.44□□□□□ -2.64
TREM1Q9NP99 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.44□□□□□ -2.64
TREM1Q9NP99 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.44□□□□□ -2.64
TREM1Q9NP99 SNORD74.6-201ENST00000364796 70 ntBASIC-1.44□□□□□ -2.64
TREM1Q9NP99 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.44□□□□□ -2.64
TREM1Q9NP99 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.44□□□□□ -2.64
TREM1Q9NP99 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
TREM1Q9NP99 AC093783.1-201ENST00000612976 329 ntBASIC-1.44□□□□□ -2.64
TREM1Q9NP99 AC002553.4-201ENST00000616896 331 ntBASIC-1.44□□□□□ -2.64
TREM1Q9NP99 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 SNORD113-8-201ENST00000363497 74 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 SNORA51.5-201ENST00000384126 131 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 MIR519A1-201ENST00000385257 85 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 RNA5SP266-201ENST00000410273 108 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 SNORD63B-201ENST00000411005 70 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 AL731563.1-201ENST00000442202 214 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 SNRPGP8-201ENST00000454064 226 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 MIR2113-201ENST00000459007 91 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 RNU6-570P-201ENST00000517051 105 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 MIR4500-201ENST00000579472 76 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 PART1_1.1-201ENST00000611761 217 ntBASIC-1.45□□□□□ -2.64
TREM1Q9NP99 RNU4-90P-201ENST00000362773 141 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms