Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.87□□□□□ -2.27
PCDH9Q9HC56 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
PCDH9Q9HC56 Y_RNA.299-201ENST00000364973 94 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 U8.15-201ENST00000390947 134 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 MIR1827-201ENST00000408549 66 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
PCDH9Q9HC56 TMSB4XP3-201ENST00000445144 114 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.86□□□□□ -2.27
PCDH9Q9HC56 U7.7-201ENST00000459276 60 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 MIR1270-201ENST00000459320 83 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 RNU7-35P-201ENST00000517174 62 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 AC025166.1-201ENST00000612411 163 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 AL136317.1-201ENST00000612653 226 ntBASIC0.86□□□□□ -2.27
PCDH9Q9HC56 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 Y_RNA.71-201ENST00000362892 104 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 RNU6-403P-201ENST00000363163 104 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 SNORD58C-201ENST00000365223 64 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 SNORD114-22-201ENST00000365423 72 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 RNU6-949P-201ENST00000384040 107 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 RNU6-42P-201ENST00000384165 107 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 RNU6-364P-201ENST00000384387 107 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 MT-TI-201ENST00000387365 69 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 RNA5SP136-201ENST00000410906 107 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 Y_RNA.630-201ENST00000411370 108 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 AC096949.1-201ENST00000412047 152 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 RNU6-772P-201ENST00000516042 105 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 RNA5SP255-201ENST00000516370 107 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 RNU6-1110P-201ENST00000516462 101 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 AC105081.1-201ENST00000617727 106 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 MIR7111-201ENST00000619751 72 ntBASIC0.85□□□□□ -2.27
PCDH9Q9HC56 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
PCDH9Q9HC56 Y_RNA.218-201ENST00000364218 104 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 RNU6-80P-201ENST00000384195 107 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 MIR125B2-201ENST00000385128 89 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 SNORD77B-201ENST00000391112 67 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 MIR938-201ENST00000401216 83 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 SNORD67.1-201ENST00000516618 108 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 RNU7-156P-201ENST00000517214 74 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 MIR4804-201ENST00000581683 73 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
PCDH9Q9HC56 MTND5P18-201ENST00000445624 1801 ntBASIC0.83□□□□□ -2.28
PCDH9Q9HC56 AL157777.2-201ENST00000258070 137 ntBASIC0.83□□□□□ -2.28
PCDH9Q9HC56 Y_RNA.198-201ENST00000364013 98 ntBASIC0.83□□□□□ -2.28
PCDH9Q9HC56 Y_RNA.213-201ENST00000364178 111 ntBASIC0.83□□□□□ -2.28
PCDH9Q9HC56 SNORA72.6-201ENST00000384520 129 ntBASIC0.83□□□□□ -2.28
PCDH9Q9HC56 RNU4-83P-201ENST00000410863 133 ntBASIC0.83□□□□□ -2.28
PCDH9Q9HC56 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
PCDH9Q9HC56 AL359881.1-201ENST00000602916 267 ntBASIC0.83□□□□□ -2.28
PCDH9Q9HC56 MIR520H-201ENST00000385126 88 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 SNORD105-201ENST00000386910 85 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 SNORD99-201ENST00000408612 74 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-447P-201ENST00000410293 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-1118P-201ENST00000410382 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-1076P-201ENST00000410397 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-355P-201ENST00000410427 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-791P-201ENST00000410467 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-705P-201ENST00000410601 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-735P-201ENST00000410612 107 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-1100P-201ENST00000410691 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-860P-201ENST00000410860 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-1217P-201ENST00000411276 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-785P-201ENST00000411324 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 MIR3910-1-201ENST00000580936 111 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 MIR3163-201ENST00000581592 73 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 AC025627.3-201ENST00000582078 182 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 U6.90-201ENST00000614007 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RMST_2.1-201ENST00000617263 136 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 U6.70-201ENST00000620287 104 ntBASIC0.82□□□□□ -2.28
PCDH9Q9HC56 RNU6-616P-201ENST00000384353 107 ntBASIC0.81□□□□□ -2.28
PCDH9Q9HC56 RNU6-959P-201ENST00000384671 107 ntBASIC0.81□□□□□ -2.28
PCDH9Q9HC56 RNU1-119P-201ENST00000391122 165 ntBASIC0.81□□□□□ -2.28
PCDH9Q9HC56 RNU7-56P-201ENST00000458744 62 ntBASIC0.81□□□□□ -2.28
PCDH9Q9HC56 RNU7-102P-201ENST00000458948 62 ntBASIC0.81□□□□□ -2.28
PCDH9Q9HC56 COX6CP6-201ENST00000490840 228 ntBASIC0.81□□□□□ -2.28
PCDH9Q9HC56 RNU7-137P-201ENST00000516788 62 ntBASIC0.81□□□□□ -2.28
PCDH9Q9HC56 MIR4491-201ENST00000581087 68 ntBASIC0.81□□□□□ -2.28
PCDH9Q9HC56 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.81□□□□□ -2.28
PCDH9Q9HC56 Y_RNA.346-201ENST00000365385 112 ntBASIC0.8□□□□□ -2.28
PCDH9Q9HC56 MIRLET7F2-201ENST00000385277 83 ntBASIC0.8□□□□□ -2.28
PCDH9Q9HC56 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
PCDH9Q9HC56 RNU6-1333P-201ENST00000516162 93 ntBASIC0.8□□□□□ -2.28
PCDH9Q9HC56 DEFB131E-201ENST00000532329 154 ntBASIC0.8□□□□□ -2.28
PCDH9Q9HC56 AC008608.1-201ENST00000603910 127 ntBASIC0.8□□□□□ -2.28
PCDH9Q9HC56 Y_RNA.13-201ENST00000362403 112 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 MIR520E-201ENST00000384867 87 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 MIR605-201ENST00000385078 83 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 RPS29P1-201ENST00000465274 159 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 SNORA25.16-201ENST00000516741 121 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 AC133485.1-201ENST00000567176 124 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 AC011195.1-201ENST00000578177 177 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 AC087741.2-201ENST00000619415 172 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 U6.109-201ENST00000636749 87 ntBASIC0.79□□□□□ -2.28
PCDH9Q9HC56 RNA5SP133-201ENST00000363368 119 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms