Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 Y_RNA.188-201ENST00000363952 111 ntBASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 SNORA75.5-201ENST00000391291 81 ntBASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 Y_RNA.793-201ENST00000411222 111 ntBASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 AL512326.2-201ENST00000426359 151 ntBASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 RNU7-113P-201ENST00000459273 62 ntBASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 RNU7-35P-201ENST00000517174 62 ntBASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 AP003327.1-201ENST00000529684 127 ntBASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 AC141273.2-201ENST00000618989 130 ntBASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 Y_RNA.32-201ENST00000362589 110 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 RNU6-508P-201ENST00000363231 103 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 Y_RNA.120-201ENST00000363304 110 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 SNORA72.6-201ENST00000384520 129 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 AL022718.1-201ENST00000412004 84 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 RNU2-35P-201ENST00000516446 142 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 RNU6-388P-201ENST00000517012 105 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 RNU6-389P-201ENST00000517048 105 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 MTND5P34-201ENST00000568888 325 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 AC072026.1-201ENST00000605023 201 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 SNORA25.18-201ENST00000607153 114 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 uc_338.16-201ENST00000621804 95 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 MIR6844-201ENST00000637122 62 ntBASIC0.37□□□□□ -2.35
RPF1Q9H9Y2 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 SNORD115-2-201ENST00000362842 82 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 SNORA36.1-201ENST00000363424 132 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 RNU4-84P-201ENST00000364200 139 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 SNORD115-20-201ENST00000365099 82 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 RNU6-690P-201ENST00000365242 106 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 SNORA32-201ENST00000384072 121 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 RNU6-239P-201ENST00000390990 99 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 SNORA25.12-201ENST00000516202 82 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 RNU7-121P-201ENST00000516604 62 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 RNA5SP33-201ENST00000516687 98 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 SNORA31.14-201ENST00000516728 116 ntBASIC0.36□□□□□ -2.35
RPF1Q9H9Y2 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 SNORA8.2-201ENST00000384372 139 ntBASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 MIR518A1-201ENST00000385068 85 ntBASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 SNORA40.8-201ENST00000411034 126 ntBASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 RNU6-240P-201ENST00000516098 97 ntBASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 RNU6-765P-201ENST00000516916 99 ntBASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 AP002392.1-201ENST00000537692 208 ntBASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 MIR4305-201ENST00000583252 102 ntBASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 MIR8087-201ENST00000612745 78 ntBASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
RPF1Q9H9Y2 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.357-201ENST00000365487 109 ntBASIC0.34□□□□□ -2.36
RPF1Q9H9Y2 RNU6-291P-201ENST00000384720 107 ntBASIC0.34□□□□□ -2.36
RPF1Q9H9Y2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
RPF1Q9H9Y2 RNU6-138P-201ENST00000515952 107 ntBASIC0.34□□□□□ -2.36
RPF1Q9H9Y2 RNU6-861P-201ENST00000516745 106 ntBASIC0.34□□□□□ -2.36
RPF1Q9H9Y2 MIR3646-201ENST00000578301 84 ntBASIC0.34□□□□□ -2.36
RPF1Q9H9Y2 MIR548AE2-201ENST00000583456 67 ntBASIC0.34□□□□□ -2.36
RPF1Q9H9Y2 MIR330-201ENST00000362196 94 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.240-201ENST00000364469 95 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.366-201ENST00000365540 102 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.401-201ENST00000383965 117 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.531-201ENST00000384589 121 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.536-201ENST00000384621 113 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 MT-TG-201ENST00000387429 68 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 MIR1270-201ENST00000459320 83 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.651-201ENST00000459380 103 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 AL359881.1-201ENST00000602916 267 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 AC011603.4-201ENST00000611325 277 ntBASIC0.33□□□□□ -2.36
RPF1Q9H9Y2 RNU6-682P-201ENST00000363843 106 ntBASIC0.32□□□□□ -2.36
RPF1Q9H9Y2 RNU6-200P-201ENST00000364743 107 ntBASIC0.32□□□□□ -2.36
RPF1Q9H9Y2 SNORD67.1-201ENST00000516618 108 ntBASIC0.32□□□□□ -2.36
RPF1Q9H9Y2 RNU6-531P-201ENST00000516694 104 ntBASIC0.32□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.697-201ENST00000516776 113 ntBASIC0.32□□□□□ -2.36
RPF1Q9H9Y2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.32□□□□□ -2.36
RPF1Q9H9Y2 RNA5SP133-201ENST00000363368 119 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.251-201ENST00000364551 99 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 RNU6-309P-201ENST00000364573 106 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.552-201ENST00000384665 112 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 RNU6-535P-201ENST00000384722 107 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 RNU7-120P-201ENST00000459334 63 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 RNU6-469P-201ENST00000516253 101 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.686-201ENST00000516548 134 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 RNU7-137P-201ENST00000516788 62 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 RNA5SP330-201ENST00000517096 96 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 AC138907.4-201ENST00000570107 226 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 DNAJC19P2-201ENST00000593340 302 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 AC021443.1-201ENST00000604478 211 ntBASIC0.31□□□□□ -2.36
RPF1Q9H9Y2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 RNU6-716P-201ENST00000365621 103 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 SNORD37.2-201ENST00000391075 66 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 SNORD71-201ENST00000411292 86 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 MTATP6P21-201ENST00000440681 189 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 RNU7-123P-201ENST00000515911 60 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 AC022523.2-201ENST00000561045 150 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 AC138749.4-201ENST00000563970 127 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 U6.109-201ENST00000636749 87 ntBASIC0.3□□□□□ -2.36
RPF1Q9H9Y2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.29□□□□□ -2.36
RPF1Q9H9Y2 Y_RNA.115-201ENST00000363272 98 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms