Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 AL590491.3-201ENST00000610731 82 ntBASIC-0.49□□□□□ -2.49
USP42Q9H9J4 MIR6507-201ENST00000613630 70 ntBASIC-0.49□□□□□ -2.49
USP42Q9H9J4 AC105081.1-201ENST00000617727 106 ntBASIC-0.49□□□□□ -2.49
USP42Q9H9J4 AL391099.1-201ENST00000624635 187 ntBASIC-0.49□□□□□ -2.49
USP42Q9H9J4 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 RNU6-806P-201ENST00000365147 105 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 MIR616-201ENST00000385293 97 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
USP42Q9H9J4 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 SNORA53-201ENST00000391141 249 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 AC244250.2-201ENST00000418731 148 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 ELOCP20-201ENST00000422460 345 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 RNA5SP67-201ENST00000516422 131 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 RNU7-137P-201ENST00000516788 62 ntBASIC-0.5□□□□□ -2.49
USP42Q9H9J4 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 RNY3P1-201ENST00000365085 102 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 RNU6-811P-201ENST00000384069 107 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 MIR516B1-201ENST00000385211 90 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 MTND4P19-201ENST00000446659 478 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 SNORA25.13-201ENST00000516395 103 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 SNORD67.1-201ENST00000516618 108 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 RNU7-70P-201ENST00000516941 66 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 MIR548AX-201ENST00000580117 73 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 RN7SL660P-201ENST00000614852 299 ntBASIC-0.51□□□□□ -2.49
USP42Q9H9J4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.51□□□□□ -2.49
USP42Q9H9J4 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 RNA5SP205-201ENST00000364653 136 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 SNORA32-201ENST00000384072 121 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 RNU4-70P-201ENST00000384579 139 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 MIR1252-201ENST00000408861 65 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 RNA5SP144-201ENST00000410846 116 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 TRAJ51-201ENST00000504127 63 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 AC006504.6-201ENST00000590142 199 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 U6atac.1-201ENST00000616025 117 ntBASIC-0.52□□□□□ -2.49
USP42Q9H9J4 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 U8.6-201ENST00000364939 135 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 RNU6-449P-201ENST00000383914 107 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 RNU6-651P-201ENST00000411040 105 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 RNU6-893P-201ENST00000458841 100 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 AC114755.3-201ENST00000481111 251 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 MIR548H5-201ENST00000580314 60 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.53□□□□□ -2.49
USP42Q9H9J4 AC037487.3-201ENST00000606668 112 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.53□□□□□ -2.49
USP42Q9H9J4 SNORD115-2-201ENST00000362842 82 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 RNU6-509P-201ENST00000363519 107 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 SNORD115-20-201ENST00000365099 82 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 RNU6-480P-201ENST00000384332 107 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 MIR599-201ENST00000385069 95 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 RBMX2P4-201ENST00000441256 376 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 AC096720.1-201ENST00000604441 183 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 AC098479.1-201ENST00000609225 154 ntBASIC-0.54□□□□□ -2.5
USP42Q9H9J4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
USP42Q9H9J4 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 RNU6-770P-201ENST00000363929 105 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 RNU4-84P-201ENST00000364200 139 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 RNU6-978P-201ENST00000364371 103 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 RNU6-429P-201ENST00000384582 108 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 RNU7-113P-201ENST00000459273 62 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 MIR1270-201ENST00000459320 83 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 SERF1AP1-201ENST00000514575 187 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 RNA5SP33-201ENST00000516687 98 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 MIR3920-201ENST00000581751 86 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.55□□□□□ -2.5
USP42Q9H9J4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.55□□□□□ -2.5
USP42Q9H9J4 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.56□□□□□ -2.5
USP42Q9H9J4 SNORA25.7-201ENST00000364375 127 ntBASIC-0.56□□□□□ -2.5
USP42Q9H9J4 RNU6-381P-201ENST00000391259 108 ntBASIC-0.56□□□□□ -2.5
USP42Q9H9J4 RNU4-43P-201ENST00000410628 137 ntBASIC-0.56□□□□□ -2.5
USP42Q9H9J4 MTND5P22-201ENST00000458380 195 ntBASIC-0.56□□□□□ -2.5
USP42Q9H9J4 SNORD2.1-201ENST00000458762 69 ntBASIC-0.56□□□□□ -2.5
USP42Q9H9J4 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.56□□□□□ -2.5
USP42Q9H9J4 MIR548AE2-201ENST00000583456 67 ntBASIC-0.56□□□□□ -2.5
USP42Q9H9J4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.56□□□□□ -2.5
USP42Q9H9J4 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 SNORD114-10-201ENST00000363409 72 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 RNY1P6-201ENST00000384193 109 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 MIR635-201ENST00000384830 98 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 RNY3P15-201ENST00000516297 97 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 MIR4436A-201ENST00000585278 85 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 RNU7-10P-201ENST00000607194 63 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 AC090971.5-201ENST00000621102 293 ntBASIC-0.57□□□□□ -2.5
USP42Q9H9J4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.58□□□□□ -2.5
USP42Q9H9J4 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.58□□□□□ -2.5
USP42Q9H9J4 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.58□□□□□ -2.5
USP42Q9H9J4 MT-TQ-201ENST00000387372 72 ntBASIC-0.58□□□□□ -2.5
USP42Q9H9J4 RNU6-735P-201ENST00000410612 107 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms