Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RNU6-813P-201ENST00000384691 107 ntBASIC1.88□□□□□ -2.11
BCAS3Q9H6U6 AC009474.2-201ENST00000451383 136 ntBASIC1.88□□□□□ -2.11
BCAS3Q9H6U6 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
BCAS3Q9H6U6 Y_RNA.659-201ENST00000515994 113 ntBASIC1.88□□□□□ -2.11
BCAS3Q9H6U6 SNORD111.1-201ENST00000516421 86 ntBASIC1.88□□□□□ -2.11
BCAS3Q9H6U6 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.88□□□□□ -2.11
BCAS3Q9H6U6 MIR4713-201ENST00000582691 75 ntBASIC1.88□□□□□ -2.11
BCAS3Q9H6U6 AL645939.4-201ENST00000604495 135 ntBASIC1.88□□□□□ -2.11
BCAS3Q9H6U6 Y_RNA.17-201ENST00000362433 111 ntBASIC1.87□□□□□ -2.11
BCAS3Q9H6U6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.87□□□□□ -2.11
BCAS3Q9H6U6 Y_RNA.247-201ENST00000364500 92 ntBASIC1.87□□□□□ -2.11
BCAS3Q9H6U6 AL356379.1-201ENST00000414105 126 ntBASIC1.87□□□□□ -2.11
BCAS3Q9H6U6 AL512598.1-201ENST00000610158 273 ntBASIC1.87□□□□□ -2.11
BCAS3Q9H6U6 SNORD116-10-201ENST00000363791 102 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 RNU6-1163P-201ENST00000364516 107 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 RNY1P13-201ENST00000365030 105 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 RNU6-1134P-201ENST00000365156 101 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 RNA5SP259-201ENST00000365541 109 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 Y_RNA.467-201ENST00000384297 102 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 MIR563-201ENST00000385080 79 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 MIR1302-7-201ENST00000408841 72 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 AP003716.2-201ENST00000528260 108 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 MIR376B-201ENST00000614515 100 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
BCAS3Q9H6U6 MIR34C-201ENST00000384831 77 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 RNU6-1321P-201ENST00000390905 107 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 AC244023.1-201ENST00000426884 112 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 AC109327.2-201ENST00000448339 378 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 AC141846.1-201ENST00000568348 142 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 MIR3192-201ENST00000584920 77 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 AC242498.1-201ENST00000604134 111 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 AL662814.1-201ENST00000617364 121 ntBASIC1.85□□□□□ -2.11
BCAS3Q9H6U6 MIR302D-201ENST00000362275 68 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 Y_RNA.98-201ENST00000363109 102 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 SNORD58A-201ENST00000383875 65 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 Y_RNA.448-201ENST00000384185 108 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 MT-TN-201ENST00000387400 73 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 HSPE1P24-201ENST00000450782 238 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 RNU7-48P-201ENST00000458875 63 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 snoU13.2-201ENST00000459201 104 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 AP003327.1-201ENST00000529684 127 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 BX248123.2-201ENST00000606318 124 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 AL096861.1-201ENST00000610899 123 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 MIR8074-201ENST00000615081 81 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 AP000648.3-201ENST00000623539 4507 ntBASIC1.84□□□□□ -2.11
BCAS3Q9H6U6 Y_RNA.173-201ENST00000363776 113 ntBASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 RNU6-865P-201ENST00000364772 107 ntBASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 RNA5SP173-201ENST00000364857 136 ntBASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 MIR17-201ENST00000385012 84 ntBASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 U8.15-201ENST00000390947 134 ntBASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 RNU6-1275P-201ENST00000391087 107 ntBASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 Y_RNA.685-201ENST00000516532 108 ntBASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 RNU6-922P-201ENST00000516753 99 ntBASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 RNU11-2P-201ENST00000516898 142 ntBASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
BCAS3Q9H6U6 HSBP1P2-201ENST00000299671 229 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 RNU6-1244P-201ENST00000363614 108 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 RNU1-42P-201ENST00000364033 160 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 RNU6-497P-201ENST00000365316 104 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 RNU6-949P-201ENST00000384040 107 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 MIR1323-201ENST00000408090 73 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 MIR548G-201ENST00000408442 89 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 RNU6-162P-201ENST00000516228 103 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 AC103810.8-201ENST00000607347 118 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 MIR6504-201ENST00000613520 61 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 AP001362.1-201ENST00000625165 124 ntBASIC1.82□□□□□ -2.12
BCAS3Q9H6U6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 Y_RNA.190-201ENST00000363964 101 ntBASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 Y_RNA.219-201ENST00000364232 113 ntBASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 RNY1P2-201ENST00000364820 117 ntBASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 SNORD116-22-201ENST00000384430 92 ntBASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 SNORD38.2-201ENST00000384470 69 ntBASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 RPS29P28-201ENST00000446439 141 ntBASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 MIR4264-201ENST00000583520 66 ntBASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 SNORA4-201ENST00000584302 138 ntBASIC1.81□□□□□ -2.12
BCAS3Q9H6U6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 MIR377-201ENST00000362145 69 ntBASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 RNU6-219P-201ENST00000364728 107 ntBASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 RNU6-396P-201ENST00000365369 105 ntBASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 MIR7-2-201ENST00000384970 110 ntBASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 RNU6-592P-201ENST00000411333 103 ntBASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 snoU13.25-201ENST00000458945 104 ntBASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 AL133373.1-201ENST00000497098 94 ntBASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 RNU6-90P-201ENST00000606352 106 ntBASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 SEPT14P17-201ENST00000617978 177 ntBASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
BCAS3Q9H6U6 MIR494-201ENST00000349529 81 ntBASIC1.79□□□□□ -2.12
BCAS3Q9H6U6 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
BCAS3Q9H6U6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.79□□□□□ -2.12
BCAS3Q9H6U6 Y_RNA.567-201ENST00000384736 106 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms