Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.10-201ENST00000362371 110 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RNU6-616P-201ENST00000384353 107 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RNA5SP261-201ENST00000410536 106 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 SNORA7.5-201ENST00000410672 110 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.681-201ENST00000516445 113 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RNU7-43P-201ENST00000516554 64 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 SNORA74.3-201ENST00000517108 154 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RNU6-902P-201ENST00000517212 91 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 AC019176.1-201ENST00000518519 225 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RN7SL793P-201ENST00000583259 296 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 AL020996.3-201ENST00000606617 222 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RNY1P4-201ENST00000384595 115 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RNU6-679P-201ENST00000391003 106 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 SNORD77B-201ENST00000391112 67 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RPL39P39-201ENST00000455840 151 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 AC025033.1-201ENST00000463883 194 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RNA5SP436-201ENST00000516020 115 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RNU6-795P-201ENST00000516323 103 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 AC012531.4-201ENST00000616509 177 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 Y_RNA.290-201ENST00000364879 114 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 Y_RNA.537-201ENST00000384626 109 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 MIR548J-201ENST00000408833 112 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 RPL31P63-201ENST00000422565 375 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 RNU7-61P-201ENST00000515897 61 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 RNU6-922P-201ENST00000516753 99 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 AC026421.1-201ENST00000519101 163 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 RNU6-170P-201ENST00000362832 104 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 SNORA32-201ENST00000384072 121 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 SNORA67.6-201ENST00000391093 99 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 RNU6-644P-201ENST00000391155 98 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 AC096949.1-201ENST00000412047 152 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 AC004941.2-201ENST00000427009 228 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 RNA5SP476-201ENST00000516613 103 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 RNU6-521P-201ENST00000516663 105 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 MIR3935-201ENST00000583472 104 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 MIR548Z-201ENST00000584743 97 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 MIR8055-201ENST00000610739 97 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 RNA5SP173-201ENST00000364857 136 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 RNA5SP160-201ENST00000364866 120 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 RNU6-1201P-201ENST00000384227 107 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 MIR450A2-201ENST00000385022 100 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 snoU13.16-201ENST00000459350 104 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 MIR6078-201ENST00000611069 100 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 AC091304.10-201ENST00000641554 121 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 Y_RNA.377-201ENST00000365644 108 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RNU6-820P-201ENST00000384273 107 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 MIR520C-201ENST00000385005 87 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RN7SL274P-201ENST00000492268 272 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RN7SKP12-201ENST00000516275 143 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RNU6-1018P-201ENST00000516577 106 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 AL512310.8-201ENST00000550183 120 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 MIR3664-201ENST00000579074 99 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 MIR4777-201ENST00000583710 86 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RNU6-1134P-201ENST00000365156 101 ntBASIC1.66□□□□□ -2.14
LRFN3Q9BTN0 SNORD41-201ENST00000386967 70 ntBASIC1.66□□□□□ -2.14
LRFN3Q9BTN0 RNU6-162P-201ENST00000516228 103 ntBASIC1.66□□□□□ -2.14
LRFN3Q9BTN0 U7.3-201ENST00000616123 62 ntBASIC1.66□□□□□ -2.14
LRFN3Q9BTN0 SNORA1.1-201ENST00000364671 133 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 SNORA18-201ENST00000384416 132 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 SNORD111.1-201ENST00000516421 86 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 RNA5SP395-201ENST00000516567 118 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 MIR4764-201ENST00000580680 88 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 AL512310.12-203ENST00000640543 90 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 MIR494-201ENST00000349529 81 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1313P-201ENST00000362622 102 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.95-201ENST00000363079 95 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 SNORD45B-201ENST00000364617 72 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 SNORD115-35-201ENST00000365122 82 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RNU6-573P-201ENST00000383938 106 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.593-201ENST00000410292 98 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RNU6-592P-201ENST00000411333 103 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RPS27P16-201ENST00000425758 201 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 HAR1A.1-201ENST00000459583 118 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 MIR8065-201ENST00000620577 100 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 AC008133.2-201ENST00000624540 351 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 Z97988.1-201ENST00000637697 135 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.17-201ENST00000362433 111 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1152P-201ENST00000384576 107 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 MRPL35P3-201ENST00000421557 364 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 AC245047.7-201ENST00000440265 293 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.659-201ENST00000515994 113 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 RN7SKP88-201ENST00000516847 250 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 RNU7-35P-201ENST00000517174 62 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 7SK.8-201ENST00000612110 250 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 7SK.11-201ENST00000615477 250 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 2470.1 ms