Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.10-201ENST00000362371 110 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RNU6-616P-201ENST00000384353 107 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RNA5SP261-201ENST00000410536 106 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 SNORA7.5-201ENST00000410672 110 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.681-201ENST00000516445 113 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RNU7-43P-201ENST00000516554 64 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 SNORA74.3-201ENST00000517108 154 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RNU6-902P-201ENST00000517212 91 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 AC019176.1-201ENST00000518519 225 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 RN7SL793P-201ENST00000583259 296 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 AL020996.3-201ENST00000606617 222 ntBASIC1.72□□□□□ -2.13
LRFN3Q9BTN0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RNY1P4-201ENST00000384595 115 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RNU6-679P-201ENST00000391003 106 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 SNORD77B-201ENST00000391112 67 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RPL39P39-201ENST00000455840 151 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 AC025033.1-201ENST00000463883 194 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RNA5SP436-201ENST00000516020 115 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 RNU6-795P-201ENST00000516323 103 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 AC012531.4-201ENST00000616509 177 ntBASIC1.71□□□□□ -2.14
LRFN3Q9BTN0 Y_RNA.290-201ENST00000364879 114 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 Y_RNA.537-201ENST00000384626 109 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 MIR548J-201ENST00000408833 112 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 RPL31P63-201ENST00000422565 375 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 RNU7-61P-201ENST00000515897 61 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 RNU6-922P-201ENST00000516753 99 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 AC026421.1-201ENST00000519101 163 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
LRFN3Q9BTN0 RNU6-170P-201ENST00000362832 104 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 SNORA32-201ENST00000384072 121 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 SNORA67.6-201ENST00000391093 99 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 RNU6-644P-201ENST00000391155 98 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 AC096949.1-201ENST00000412047 152 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 AC004941.2-201ENST00000427009 228 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 RNA5SP476-201ENST00000516613 103 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 RNU6-521P-201ENST00000516663 105 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 MIR3935-201ENST00000583472 104 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 MIR548Z-201ENST00000584743 97 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 MIR8055-201ENST00000610739 97 ntBASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LRFN3Q9BTN0 RNA5SP173-201ENST00000364857 136 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 RNA5SP160-201ENST00000364866 120 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 RNU6-1201P-201ENST00000384227 107 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 MIR450A2-201ENST00000385022 100 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 snoU13.16-201ENST00000459350 104 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 MIR6078-201ENST00000611069 100 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 AC091304.10-201ENST00000641554 121 ntBASIC1.68□□□□□ -2.14
LRFN3Q9BTN0 Y_RNA.377-201ENST00000365644 108 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RNU6-820P-201ENST00000384273 107 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 MIR520C-201ENST00000385005 87 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RN7SL274P-201ENST00000492268 272 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RN7SKP12-201ENST00000516275 143 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RNU6-1018P-201ENST00000516577 106 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 AL512310.8-201ENST00000550183 120 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 MIR3664-201ENST00000579074 99 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 MIR4777-201ENST00000583710 86 ntBASIC1.67□□□□□ -2.14
LRFN3Q9BTN0 RNU6-1134P-201ENST00000365156 101 ntBASIC1.66□□□□□ -2.14
LRFN3Q9BTN0 SNORD41-201ENST00000386967 70 ntBASIC1.66□□□□□ -2.14
LRFN3Q9BTN0 RNU6-162P-201ENST00000516228 103 ntBASIC1.66□□□□□ -2.14
LRFN3Q9BTN0 U7.3-201ENST00000616123 62 ntBASIC1.66□□□□□ -2.14
LRFN3Q9BTN0 SNORA1.1-201ENST00000364671 133 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 SNORA18-201ENST00000384416 132 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 SNORD111.1-201ENST00000516421 86 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 RNA5SP395-201ENST00000516567 118 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 MIR4764-201ENST00000580680 88 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 AL512310.12-203ENST00000640543 90 ntBASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LRFN3Q9BTN0 MIR494-201ENST00000349529 81 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1313P-201ENST00000362622 102 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.95-201ENST00000363079 95 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 SNORD45B-201ENST00000364617 72 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 SNORD115-35-201ENST00000365122 82 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RNU6-573P-201ENST00000383938 106 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.593-201ENST00000410292 98 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RNU6-592P-201ENST00000411333 103 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 RPS27P16-201ENST00000425758 201 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 HAR1A.1-201ENST00000459583 118 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 MIR8065-201ENST00000620577 100 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 AC008133.2-201ENST00000624540 351 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 Z97988.1-201ENST00000637697 135 ntBASIC1.64□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.17-201ENST00000362433 111 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1152P-201ENST00000384576 107 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 MRPL35P3-201ENST00000421557 364 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 AC245047.7-201ENST00000440265 293 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.659-201ENST00000515994 113 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 RN7SKP88-201ENST00000516847 250 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 RNU7-35P-201ENST00000517174 62 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 7SK.8-201ENST00000612110 250 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 7SK.11-201ENST00000615477 250 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms