Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNA5SP237-201ENST00000410414 113 ntBASIC1.33□□□□□ -2.2
SMOQ99835 RNU6-1086P-201ENST00000410930 100 ntBASIC1.33□□□□□ -2.2
SMOQ99835 AC063976.4-201ENST00000421971 163 ntBASIC1.33□□□□□ -2.2
SMOQ99835 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
SMOQ99835 MIR30D-201ENST00000362283 70 ntBASIC1.32□□□□□ -2.2
SMOQ99835 SNORD77B-201ENST00000391112 67 ntBASIC1.32□□□□□ -2.2
SMOQ99835 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.32□□□□□ -2.2
SMOQ99835 snoU13.21-201ENST00000459368 105 ntBASIC1.32□□□□□ -2.2
SMOQ99835 SNORD67.1-201ENST00000516618 108 ntBASIC1.32□□□□□ -2.2
SMOQ99835 RNU6-919P-201ENST00000516731 104 ntBASIC1.32□□□□□ -2.2
SMOQ99835 SNORA70.22-201ENST00000517160 124 ntBASIC1.32□□□□□ -2.2
SMOQ99835 AC023827.1-201ENST00000569247 97 ntBASIC1.32□□□□□ -2.2
SMOQ99835 AL589743.1-201ENST00000551932 2712 ntBASIC1.31□□□□□ -2.2
SMOQ99835 RNU6-44P-201ENST00000384045 107 ntBASIC1.31□□□□□ -2.2
SMOQ99835 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.31□□□□□ -2.2
SMOQ99835 AL035461.1-201ENST00000421490 332 ntBASIC1.31□□□□□ -2.2
SMOQ99835 RNA5SP102-201ENST00000516865 106 ntBASIC1.31□□□□□ -2.2
SMOQ99835 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
SMOQ99835 MIR6515-201ENST00000619843 57 ntBASIC1.31□□□□□ -2.2
SMOQ99835 AC008163.1-202ENST00000636004 2889 ntBASIC1.31□□□□□ -2.2
SMOQ99835 Y_RNA.85-201ENST00000363014 111 ntBASIC1.3□□□□□ -2.2
SMOQ99835 SNORD113.3-201ENST00000364630 78 ntBASIC1.3□□□□□ -2.2
SMOQ99835 RNU6-53P-201ENST00000365367 106 ntBASIC1.3□□□□□ -2.2
SMOQ99835 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
SMOQ99835 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
SMOQ99835 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
SMOQ99835 FAM71BP1-201ENST00000604431 523 ntBASIC1.3□□□□□ -2.2
SMOQ99835 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SMOQ99835 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
SMOQ99835 Y_RNA.36-201ENST00000362602 112 ntBASIC1.29□□□□□ -2.2
SMOQ99835 RNU6-1107P-201ENST00000364817 104 ntBASIC1.29□□□□□ -2.2
SMOQ99835 SNORD114-22-201ENST00000365423 72 ntBASIC1.29□□□□□ -2.2
SMOQ99835 RNU6-949P-201ENST00000384040 107 ntBASIC1.29□□□□□ -2.2
SMOQ99835 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
SMOQ99835 RNU6-1307P-201ENST00000391012 103 ntBASIC1.29□□□□□ -2.2
SMOQ99835 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
SMOQ99835 RNU7-90P-201ENST00000459216 62 ntBASIC1.29□□□□□ -2.2
SMOQ99835 RPL39P34-201ENST00000477141 156 ntBASIC1.29□□□□□ -2.2
SMOQ99835 RNU7-137P-201ENST00000516788 62 ntBASIC1.29□□□□□ -2.2
SMOQ99835 AC106800.4-201ENST00000614905 153 ntBASIC1.29□□□□□ -2.2
SMOQ99835 AL162726.3-218ENST00000636401 95 ntBASIC1.29□□□□□ -2.2
SMOQ99835 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
SMOQ99835 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMOQ99835 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
SMOQ99835 U8.6-201ENST00000364939 135 ntBASIC1.28□□□□□ -2.2
SMOQ99835 SNORA22-201ENST00000383907 134 ntBASIC1.28□□□□□ -2.2
SMOQ99835 MIR206-201ENST00000384872 86 ntBASIC1.28□□□□□ -2.2
SMOQ99835 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
SMOQ99835 AC105081.1-201ENST00000617727 106 ntBASIC1.28□□□□□ -2.2
SMOQ99835 AC012676.2-201ENST00000619258 186 ntBASIC1.28□□□□□ -2.2
SMOQ99835 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMOQ99835 RNU4-67P-201ENST00000364569 141 ntBASIC1.27□□□□□ -2.21
SMOQ99835 RNU6-816P-201ENST00000390914 107 ntBASIC1.27□□□□□ -2.21
SMOQ99835 RNU6-1268P-201ENST00000391214 107 ntBASIC1.27□□□□□ -2.21
SMOQ99835 RNU6-1239P-201ENST00000391310 107 ntBASIC1.27□□□□□ -2.21
SMOQ99835 SNORD83.1-201ENST00000411362 77 ntBASIC1.27□□□□□ -2.21
SMOQ99835 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
SMOQ99835 RNU6-412P-201ENST00000516434 106 ntBASIC1.27□□□□□ -2.21
SMOQ99835 AC068339.1-201ENST00000526965 141 ntBASIC1.27□□□□□ -2.21
SMOQ99835 RNU6-94P-201ENST00000607728 107 ntBASIC1.27□□□□□ -2.21
SMOQ99835 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.27□□□□□ -2.21
SMOQ99835 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SMOQ99835 SNORA63.4-201ENST00000362763 126 ntBASIC1.26□□□□□ -2.21
SMOQ99835 RNU6-363P-201ENST00000362895 105 ntBASIC1.26□□□□□ -2.21
SMOQ99835 SNORD114-10-201ENST00000363409 72 ntBASIC1.26□□□□□ -2.21
SMOQ99835 Y_RNA.309-201ENST00000365046 111 ntBASIC1.26□□□□□ -2.21
SMOQ99835 SNORD115-35-201ENST00000365122 82 ntBASIC1.26□□□□□ -2.21
SMOQ99835 Y_RNA.374-201ENST00000365606 101 ntBASIC1.26□□□□□ -2.21
SMOQ99835 MT-TF-201ENST00000387314 71 ntBASIC1.26□□□□□ -2.21
SMOQ99835 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SMOQ99835 U8.15-201ENST00000390947 134 ntBASIC1.26□□□□□ -2.21
SMOQ99835 SNORD12-201ENST00000391002 90 ntBASIC1.26□□□□□ -2.21
SMOQ99835 SNORD111-201ENST00000408139 94 ntBASIC1.26□□□□□ -2.21
SMOQ99835 AC096949.1-201ENST00000412047 152 ntBASIC1.26□□□□□ -2.21
SMOQ99835 AC015818.7-201ENST00000428754 109 ntBASIC1.26□□□□□ -2.21
SMOQ99835 AL353813.1-201ENST00000440700 253 ntBASIC1.26□□□□□ -2.21
SMOQ99835 AC087499.7-201ENST00000441958 109 ntBASIC1.26□□□□□ -2.21
SMOQ99835 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
SMOQ99835 RNU7-2P-201ENST00000516096 62 ntBASIC1.26□□□□□ -2.21
SMOQ99835 RNU6-521P-201ENST00000516663 105 ntBASIC1.26□□□□□ -2.21
SMOQ99835 MIR5009-201ENST00000578736 100 ntBASIC1.26□□□□□ -2.21
SMOQ99835 MIR6078-201ENST00000611069 100 ntBASIC1.26□□□□□ -2.21
SMOQ99835 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
SMOQ99835 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
SMOQ99835 Y_RNA.49-201ENST00000362714 112 ntBASIC1.25□□□□□ -2.21
SMOQ99835 Y_RNA.81-201ENST00000362997 102 ntBASIC1.25□□□□□ -2.21
SMOQ99835 Y_RNA.323-201ENST00000365157 109 ntBASIC1.25□□□□□ -2.21
SMOQ99835 RNU6-1321P-201ENST00000390905 107 ntBASIC1.25□□□□□ -2.21
SMOQ99835 RPL39P25-201ENST00000449384 154 ntBASIC1.25□□□□□ -2.21
SMOQ99835 MIR18B-201ENST00000454574 71 ntBASIC1.25□□□□□ -2.21
SMOQ99835 RNU6-1014P-201ENST00000383940 103 ntBASIC1.24□□□□□ -2.21
SMOQ99835 Y_RNA.448-201ENST00000384185 108 ntBASIC1.24□□□□□ -2.21
SMOQ99835 Y_RNA.507-201ENST00000384500 99 ntBASIC1.24□□□□□ -2.21
SMOQ99835 RNU6-679P-201ENST00000391003 106 ntBASIC1.24□□□□□ -2.21
SMOQ99835 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.24□□□□□ -2.21
SMOQ99835 MIR1912-201ENST00000410389 80 ntBASIC1.24□□□□□ -2.21
SMOQ99835 SNORA7.5-201ENST00000410672 110 ntBASIC1.24□□□□□ -2.21
SMOQ99835 RNU7-40P-201ENST00000516397 64 ntBASIC1.24□□□□□ -2.21
SMOQ99835 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
SMOQ99835 uc_338.28-201ENST00000612082 187 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms