Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
NPAS1Q99742 IGKV1-22-201ENST00000524313 326 ntBASIC0.9□□□□□ -2.27
NPAS1Q99742 DEFB131E-201ENST00000532329 154 ntBASIC0.9□□□□□ -2.27
NPAS1Q99742 RNU6-704P-201ENST00000364162 103 ntBASIC0.89□□□□□ -2.27
NPAS1Q99742 RNU6-1104P-201ENST00000384723 104 ntBASIC0.89□□□□□ -2.27
NPAS1Q99742 RMST_2.1-201ENST00000617263 136 ntBASIC0.89□□□□□ -2.27
NPAS1Q99742 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
NPAS1Q99742 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
NPAS1Q99742 RNU6-781P-201ENST00000516377 101 ntBASIC0.88□□□□□ -2.27
NPAS1Q99742 SNORD67.1-201ENST00000516618 108 ntBASIC0.88□□□□□ -2.27
NPAS1Q99742 AC133485.1-201ENST00000567176 124 ntBASIC0.88□□□□□ -2.27
NPAS1Q99742 AC011195.1-201ENST00000578177 177 ntBASIC0.88□□□□□ -2.27
NPAS1Q99742 AC025166.1-201ENST00000612411 163 ntBASIC0.88□□□□□ -2.27
NPAS1Q99742 AC105081.1-201ENST00000617727 106 ntBASIC0.88□□□□□ -2.27
NPAS1Q99742 SNORD50.2-201ENST00000365465 70 ntBASIC0.87□□□□□ -2.27
NPAS1Q99742 MIR1276-201ENST00000408707 83 ntBASIC0.87□□□□□ -2.27
NPAS1Q99742 RNU7-56P-201ENST00000458744 62 ntBASIC0.87□□□□□ -2.27
NPAS1Q99742 RNU7-102P-201ENST00000458948 62 ntBASIC0.87□□□□□ -2.27
NPAS1Q99742 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
NPAS1Q99742 MIR3163-201ENST00000581592 73 ntBASIC0.87□□□□□ -2.27
NPAS1Q99742 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
NPAS1Q99742 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.87□□□□□ -2.27
NPAS1Q99742 RNU6-369P-201ENST00000362515 102 ntBASIC0.86□□□□□ -2.27
NPAS1Q99742 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
NPAS1Q99742 SUMO1P3-201ENST00000439961 304 ntBASIC0.86□□□□□ -2.27
NPAS1Q99742 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
NPAS1Q99742 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
NPAS1Q99742 Y_RNA.198-201ENST00000364013 98 ntBASIC0.85□□□□□ -2.27
NPAS1Q99742 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
NPAS1Q99742 Y_RNA.617-201ENST00000410920 90 ntBASIC0.85□□□□□ -2.27
NPAS1Q99742 COX6CP6-201ENST00000490840 228 ntBASIC0.85□□□□□ -2.27
NPAS1Q99742 RNU6-1234P-201ENST00000516877 103 ntBASIC0.85□□□□□ -2.27
NPAS1Q99742 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
NPAS1Q99742 MIR4491-201ENST00000581087 68 ntBASIC0.85□□□□□ -2.27
NPAS1Q99742 AL353765.1-201ENST00000605514 183 ntBASIC0.85□□□□□ -2.27
NPAS1Q99742 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
NPAS1Q99742 AL157777.2-201ENST00000258070 137 ntBASIC0.84□□□□□ -2.27
NPAS1Q99742 Y_RNA.13-201ENST00000362403 112 ntBASIC0.84□□□□□ -2.27
NPAS1Q99742 SNORD114-10-201ENST00000363409 72 ntBASIC0.84□□□□□ -2.27
NPAS1Q99742 SNORD58C-201ENST00000365223 64 ntBASIC0.84□□□□□ -2.27
NPAS1Q99742 Y_RNA.346-201ENST00000365385 112 ntBASIC0.84□□□□□ -2.27
NPAS1Q99742 RNA5SP222-201ENST00000411039 105 ntBASIC0.84□□□□□ -2.27
NPAS1Q99742 TMSB4XP3-201ENST00000445144 114 ntBASIC0.84□□□□□ -2.27
NPAS1Q99742 RNU7-137P-201ENST00000516788 62 ntBASIC0.84□□□□□ -2.27
NPAS1Q99742 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
NPAS1Q99742 MIR337-201ENST00000362281 93 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 RNA5SP133-201ENST00000363368 119 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 Y_RNA.280-201ENST00000364765 112 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 SNORD114-22-201ENST00000365423 72 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
NPAS1Q99742 RNU6-80P-201ENST00000384195 107 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 MIR605-201ENST00000385078 83 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 RNU7-107P-201ENST00000459121 61 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 RNU6-772P-201ENST00000516042 105 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 SNORD92-201ENST00000585078 85 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 U6.109-201ENST00000636749 87 ntBASIC0.83□□□□□ -2.28
NPAS1Q99742 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
NPAS1Q99742 MTND5P18-201ENST00000445624 1801 ntBASIC0.82□□□□□ -2.28
NPAS1Q99742 RNA5SP117-201ENST00000365294 118 ntBASIC0.82□□□□□ -2.28
NPAS1Q99742 RNU6-616P-201ENST00000384353 107 ntBASIC0.82□□□□□ -2.28
NPAS1Q99742 AL603908.1-201ENST00000406098 201 ntBASIC0.82□□□□□ -2.28
NPAS1Q99742 AL359881.1-201ENST00000602916 267 ntBASIC0.82□□□□□ -2.28
NPAS1Q99742 AC008608.1-201ENST00000603910 127 ntBASIC0.82□□□□□ -2.28
NPAS1Q99742 Y_RNA.71-201ENST00000362892 104 ntBASIC0.81□□□□□ -2.28
NPAS1Q99742 SNORA36.2-201ENST00000384004 127 ntBASIC0.81□□□□□ -2.28
NPAS1Q99742 Y_RNA.448-201ENST00000384185 108 ntBASIC0.81□□□□□ -2.28
NPAS1Q99742 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
NPAS1Q99742 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
NPAS1Q99742 SNORA25.16-201ENST00000516741 121 ntBASIC0.81□□□□□ -2.28
NPAS1Q99742 MIR6082-201ENST00000613604 109 ntBASIC0.81□□□□□ -2.28
NPAS1Q99742 RNU4-58P-201ENST00000363192 141 ntBASIC0.8□□□□□ -2.28
NPAS1Q99742 RNY4P6-201ENST00000363667 96 ntBASIC0.8□□□□□ -2.28
NPAS1Q99742 RNU6-865P-201ENST00000364772 107 ntBASIC0.8□□□□□ -2.28
NPAS1Q99742 MIR520E-201ENST00000384867 87 ntBASIC0.8□□□□□ -2.28
NPAS1Q99742 MIR206-201ENST00000384872 86 ntBASIC0.8□□□□□ -2.28
NPAS1Q99742 Y_RNA.588-201ENST00000391254 102 ntBASIC0.8□□□□□ -2.28
NPAS1Q99742 RNU6-448P-201ENST00000517052 107 ntBASIC0.8□□□□□ -2.28
NPAS1Q99742 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.8□□□□□ -2.28
NPAS1Q99742 MIR101-2-201ENST00000362195 79 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 MIR573-201ENST00000384964 99 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 MT-TI-201ENST00000387365 69 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 MIR1270-201ENST00000459320 83 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 RNU7-2P-201ENST00000516096 62 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 RNU6-1194P-201ENST00000516208 104 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 RNU6-531P-201ENST00000516694 104 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 Y_RNA.697-201ENST00000516776 113 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 AC090897.1-201ENST00000580909 226 ntBASIC0.79□□□□□ -2.28
NPAS1Q99742 Y_RNA.98-201ENST00000363109 102 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 Y_RNA.119-201ENST00000363301 96 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 Y_RNA.525-201ENST00000384570 113 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 RNU6-1321P-201ENST00000390905 107 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 Y_RNA.630-201ENST00000411370 108 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 AC244098.3-201ENST00000424803 96 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 Y_RNA.676-201ENST00000516393 96 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 MIR3612-201ENST00000579753 87 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 MIR6504-201ENST00000613520 61 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 MIR8066-201ENST00000617280 78 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms