Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RNU7-102P-201ENST00000458948 62 ntBASIC0.63□□□□□ -2.31
RAD9AQ99638 SNORD92-201ENST00000585078 85 ntBASIC0.63□□□□□ -2.31
RAD9AQ99638 RNA5SP257-201ENST00000363023 116 ntBASIC0.62□□□□□ -2.31
RAD9AQ99638 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
RAD9AQ99638 RNU7-113P-201ENST00000459273 62 ntBASIC0.62□□□□□ -2.31
RAD9AQ99638 RNU6-229P-201ENST00000516614 102 ntBASIC0.62□□□□□ -2.31
RAD9AQ99638 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.62□□□□□ -2.31
RAD9AQ99638 AC112693.2-201ENST00000556538 232 ntBASIC0.62□□□□□ -2.31
RAD9AQ99638 AC008608.1-201ENST00000603910 127 ntBASIC0.62□□□□□ -2.31
RAD9AQ99638 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.62□□□□□ -2.31
RAD9AQ99638 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
RAD9AQ99638 RNU4-11P-201ENST00000365287 132 ntBASIC0.61□□□□□ -2.31
RAD9AQ99638 U8.15-201ENST00000390947 134 ntBASIC0.61□□□□□ -2.31
RAD9AQ99638 MIR1197-201ENST00000408818 88 ntBASIC0.61□□□□□ -2.31
RAD9AQ99638 RNU6-240P-201ENST00000516098 97 ntBASIC0.61□□□□□ -2.31
RAD9AQ99638 Y_RNA.120-201ENST00000363304 110 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 RNU6-151P-201ENST00000364158 107 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 RNU4-45P-201ENST00000365469 141 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 RNU6-949P-201ENST00000384040 107 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 Y_RNA.470-201ENST00000384307 117 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 RNU4-83P-201ENST00000410863 133 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 RNA5SP33-201ENST00000516687 98 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 AC133485.4-201ENST00000561835 220 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 AC138907.4-201ENST00000570107 226 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 MIR3612-201ENST00000579753 87 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 AC090897.1-201ENST00000580909 226 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 MIR4305-201ENST00000583252 102 ntBASIC0.6□□□□□ -2.31
RAD9AQ99638 RNU6-508P-201ENST00000363231 103 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 RNU6-309P-201ENST00000364573 106 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 Y_RNA.270-201ENST00000364693 104 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 RNY1P13-201ENST00000365030 105 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 RNU6-449P-201ENST00000383914 107 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 SNORA36.2-201ENST00000384004 127 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 RNU6-394P-201ENST00000410735 107 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 RNU6-1086P-201ENST00000410930 100 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 AL512326.2-201ENST00000426359 151 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 Y_RNA.686-201ENST00000516548 134 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 Y_RNA.690-201ENST00000516603 95 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 RNU6-794P-201ENST00000517261 64 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 AC021443.1-201ENST00000604478 211 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 FTX_2.1-201ENST00000618816 94 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 Y_RNA.778-201ENST00000620203 90 ntBASIC0.59□□□□□ -2.31
RAD9AQ99638 SNORD115-2-201ENST00000362842 82 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 RNU6-403P-201ENST00000363163 104 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 SNORD115-20-201ENST00000365099 82 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 RNU6-1130P-201ENST00000365434 107 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 Y_RNA.580-201ENST00000391004 95 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 AL603914.1-201ENST00000401964 204 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 Y_RNA.651-201ENST00000459380 103 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 RNU7-79P-201ENST00000516082 62 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 RNU2-35P-201ENST00000516446 142 ntBASIC0.58□□□□□ -2.32
RAD9AQ99638 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.57□□□□□ -2.32
RAD9AQ99638 MIR18A-201ENST00000362310 71 ntBASIC0.57□□□□□ -2.32
RAD9AQ99638 Y_RNA.150-201ENST00000363562 102 ntBASIC0.57□□□□□ -2.32
RAD9AQ99638 SNORD116-18-201ENST00000383961 92 ntBASIC0.57□□□□□ -2.32
RAD9AQ99638 Y_RNA.433-201ENST00000384089 102 ntBASIC0.57□□□□□ -2.32
RAD9AQ99638 Y_RNA.531-201ENST00000384589 121 ntBASIC0.57□□□□□ -2.32
RAD9AQ99638 AC002350.1-201ENST00000490759 375 ntBASIC0.57□□□□□ -2.32
RAD9AQ99638 RNU7-35P-201ENST00000517174 62 ntBASIC0.57□□□□□ -2.32
RAD9AQ99638 AC243829.6-201ENST00000612652 106 ntBASIC0.57□□□□□ -2.32
RAD9AQ99638 MIR8066-201ENST00000617280 78 ntBASIC0.57□□□□□ -2.32
RAD9AQ99638 Y_RNA.42-201ENST00000362660 108 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 SNORA32-201ENST00000384072 121 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 RNU6-804P-201ENST00000384286 107 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 RNU6-886P-201ENST00000384319 105 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 PCNPP3-201ENST00000393579 471 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 SNORD100-201ENST00000408573 76 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 AC096949.1-201ENST00000412047 152 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 RNU7-164P-201ENST00000459221 62 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 RNU5E-3P-201ENST00000515913 68 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 RNU6-448P-201ENST00000517052 107 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 MIR4491-201ENST00000581087 68 ntBASIC0.56□□□□□ -2.32
RAD9AQ99638 Y_RNA.8-201ENST00000362353 102 ntBASIC0.55□□□□□ -2.32
RAD9AQ99638 Y_RNA.13-201ENST00000362403 112 ntBASIC0.55□□□□□ -2.32
RAD9AQ99638 MIR140-201ENST00000385282 100 ntBASIC0.55□□□□□ -2.32
RAD9AQ99638 Y_RNA.588-201ENST00000391254 102 ntBASIC0.55□□□□□ -2.32
RAD9AQ99638 MIR513C-201ENST00000401352 84 ntBASIC0.55□□□□□ -2.32
RAD9AQ99638 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
RAD9AQ99638 RNU7-197P-201ENST00000458836 62 ntBASIC0.55□□□□□ -2.32
RAD9AQ99638 MIR3144-201ENST00000579460 79 ntBASIC0.55□□□□□ -2.32
RAD9AQ99638 MIR548AE2-201ENST00000583456 67 ntBASIC0.55□□□□□ -2.32
RAD9AQ99638 Y_RNA.366-201ENST00000365540 102 ntBASIC0.54□□□□□ -2.32
RAD9AQ99638 VTRNA1-3-201ENST00000365645 89 ntBASIC0.54□□□□□ -2.32
RAD9AQ99638 SNORA72.6-201ENST00000384520 129 ntBASIC0.54□□□□□ -2.32
RAD9AQ99638 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
RAD9AQ99638 RNU6-460P-201ENST00000391158 108 ntBASIC0.54□□□□□ -2.32
RAD9AQ99638 RNU7-123P-201ENST00000515911 60 ntBASIC0.54□□□□□ -2.32
RAD9AQ99638 MIR6082-201ENST00000613604 109 ntBASIC0.54□□□□□ -2.32
RAD9AQ99638 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
RAD9AQ99638 RNA5SP117-201ENST00000365294 118 ntBASIC0.53□□□□□ -2.32
RAD9AQ99638 Y_RNA.398-201ENST00000383952 99 ntBASIC0.53□□□□□ -2.32
RAD9AQ99638 Y_RNA.617-201ENST00000410920 90 ntBASIC0.53□□□□□ -2.32
RAD9AQ99638 AC108059.2-201ENST00000434626 151 ntBASIC0.53□□□□□ -2.32
RAD9AQ99638 MIR3671-201ENST00000580455 88 ntBASIC0.53□□□□□ -2.32
RAD9AQ99638 AC098479.1-201ENST00000609225 154 ntBASIC0.53□□□□□ -2.32
RAD9AQ99638 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
RAD9AQ99638 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms