Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
SYNGAP1Q96PV0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
SYNGAP1Q96PV0 Y_RNA.68-201ENST00000362881 102 ntBASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 SNORD116-10-201ENST00000363791 102 ntBASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-1276P-201ENST00000365372 104 ntBASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 SNORD58A-201ENST00000383875 65 ntBASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-439P-201ENST00000384188 106 ntBASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 SNORA40.18-201ENST00000391200 128 ntBASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 RNA5SP338-201ENST00000410495 85 ntBASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 AC009474.2-201ENST00000451383 136 ntBASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 SNORD111.1-201ENST00000516421 86 ntBASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-1163P-201ENST00000364516 107 ntBASIC2.2□□□□□ -2.06
SYNGAP1Q96PV0 Y_RNA.567-201ENST00000384736 106 ntBASIC2.2□□□□□ -2.06
SYNGAP1Q96PV0 AL445685.2-201ENST00000422551 342 ntBASIC2.2□□□□□ -2.06
SYNGAP1Q96PV0 RNU1-98P-201ENST00000458992 160 ntBASIC2.2□□□□□ -2.06
SYNGAP1Q96PV0 RNU7-137P-201ENST00000516788 62 ntBASIC2.2□□□□□ -2.06
SYNGAP1Q96PV0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.2□□□□□ -2.06
SYNGAP1Q96PV0 MIR4668-201ENST00000582284 70 ntBASIC2.2□□□□□ -2.06
SYNGAP1Q96PV0 Y_RNA.98-201ENST00000363109 102 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 SNORD114-10-201ENST00000363409 72 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 SNORD38.2-201ENST00000384470 69 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 MIR598-201ENST00000384868 97 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 MIR548G-201ENST00000408442 89 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 RNA5SP225-201ENST00000410874 135 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 RNU7-48P-201ENST00000458875 63 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 RNU2-19P-201ENST00000517288 84 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 AC133485.1-201ENST00000567176 124 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 MIR4285-201ENST00000581001 85 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SYNGAP1Q96PV0 MIR1255A-201ENST00000408338 113 ntBASIC2.18□□□□□ -2.06
SYNGAP1Q96PV0 Y_RNA.685-201ENST00000516532 108 ntBASIC2.18□□□□□ -2.06
SYNGAP1Q96PV0 SEPT14P17-201ENST00000617978 177 ntBASIC2.18□□□□□ -2.06
SYNGAP1Q96PV0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-228P-201ENST00000362700 106 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNY1P13-201ENST00000365030 105 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 Y_RNA.609-201ENST00000410669 89 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 Y_RNA.611-201ENST00000410682 108 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-1006P-201ENST00000516998 103 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 AL161722.3-201ENST00000605789 2983 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 SNORA25.3-201ENST00000363205 127 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 MIR194-1-201ENST00000384892 85 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 MIR653-201ENST00000385279 96 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-447P-201ENST00000410293 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-1118P-201ENST00000410382 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-1076P-201ENST00000410397 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-355P-201ENST00000410427 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-791P-201ENST00000410467 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-705P-201ENST00000410601 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-1100P-201ENST00000410691 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-860P-201ENST00000410860 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-1217P-201ENST00000411276 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNU6-785P-201ENST00000411324 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 JTBP1-201ENST00000441314 247 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 RNA5SP102-201ENST00000516865 106 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 AC141846.1-201ENST00000568348 142 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 U6.90-201ENST00000614007 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 AC012676.2-201ENST00000619258 186 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 U6.70-201ENST00000620287 104 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 MIR3202-2-201ENST00000635980 79 ntBASIC2.17□□□□□ -2.06
SYNGAP1Q96PV0 Y_RNA.437-201ENST00000384113 113 ntBASIC2.16□□□□□ -2.06
SYNGAP1Q96PV0 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
SYNGAP1Q96PV0 RNU1-123P-201ENST00000458950 160 ntBASIC2.16□□□□□ -2.06
SYNGAP1Q96PV0 RNU7-95P-201ENST00000459222 64 ntBASIC2.16□□□□□ -2.06
SYNGAP1Q96PV0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.16□□□□□ -2.06
SYNGAP1Q96PV0 MIR5588-201ENST00000581890 63 ntBASIC2.16□□□□□ -2.06
SYNGAP1Q96PV0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SYNGAP1Q96PV0 RNA5SP48-201ENST00000363969 126 ntBASIC2.15□□□□□ -2.07
SYNGAP1Q96PV0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.15□□□□□ -2.07
SYNGAP1Q96PV0 AC003989.2-201ENST00000440224 169 ntBASIC2.15□□□□□ -2.07
SYNGAP1Q96PV0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.15□□□□□ -2.07
SYNGAP1Q96PV0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.15□□□□□ -2.07
SYNGAP1Q96PV0 AP001362.1-201ENST00000625165 124 ntBASIC2.15□□□□□ -2.07
SYNGAP1Q96PV0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.14□□□□□ -2.07
SYNGAP1Q96PV0 SNORD114-22-201ENST00000365423 72 ntBASIC2.14□□□□□ -2.07
SYNGAP1Q96PV0 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
SYNGAP1Q96PV0 RNU6-675P-201ENST00000384236 104 ntBASIC2.14□□□□□ -2.07
SYNGAP1Q96PV0 MIR588-201ENST00000384900 83 ntBASIC2.14□□□□□ -2.07
SYNGAP1Q96PV0 Y_RNA.620-201ENST00000411009 88 ntBASIC2.14□□□□□ -2.07
SYNGAP1Q96PV0 RNA5SP476-201ENST00000516613 103 ntBASIC2.14□□□□□ -2.07
SYNGAP1Q96PV0 MIR3192-201ENST00000584920 77 ntBASIC2.14□□□□□ -2.07
SYNGAP1Q96PV0 AL512598.1-201ENST00000610158 273 ntBASIC2.14□□□□□ -2.07
SYNGAP1Q96PV0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 AL596028.1-201ENST00000326971 197 ntBASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 RNU6-219P-201ENST00000364728 107 ntBASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 MIR9-3-201ENST00000385084 90 ntBASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 Y_RNA.681-201ENST00000516445 113 ntBASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 PRELID3BP2-201ENST00000605362 201 ntBASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms