Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 RNU6-902P-201ENST00000517212 91 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 AL512310.8-201ENST00000550183 120 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 FAM71BP1-201ENST00000604431 523 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.41□□□□□ -2.18
VCPIP1Q96JH7 SNORD33-201ENST00000362761 85 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 RNY3P2-201ENST00000362918 102 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 RNU6-1099P-201ENST00000363533 107 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.360-201ENST00000365512 102 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 SNORA18-201ENST00000384416 132 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 RNU6-521P-201ENST00000516663 105 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 RNU6-165P-201ENST00000517170 99 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 RMST_2.1-201ENST00000617263 136 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.818-201ENST00000618813 71 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 MIR8065-201ENST00000620577 100 ntBASIC1.4□□□□□ -2.19
VCPIP1Q96JH7 RNU6-1131P-201ENST00000364955 107 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 RNU6-53P-201ENST00000365367 106 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 SNORD114-22-201ENST00000365423 72 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.369-201ENST00000365568 117 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 RNU6-1237P-201ENST00000384777 107 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 MIR577-201ENST00000385196 96 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 RNU6-947P-201ENST00000516264 106 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 MIR3664-201ENST00000579074 99 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 MIR3192-201ENST00000584920 77 ntBASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VCPIP1Q96JH7 SNORD38B-201ENST00000384690 67 ntBASIC1.38□□□□□ -2.19
VCPIP1Q96JH7 RNU6-679P-201ENST00000391003 106 ntBASIC1.38□□□□□ -2.19
VCPIP1Q96JH7 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
VCPIP1Q96JH7 RNU6-1086P-201ENST00000410930 100 ntBASIC1.38□□□□□ -2.19
VCPIP1Q96JH7 SCARNA23-201ENST00000516060 130 ntBASIC1.38□□□□□ -2.19
VCPIP1Q96JH7 AL096861.1-201ENST00000610899 123 ntBASIC1.38□□□□□ -2.19
VCPIP1Q96JH7 SNORD38B-202ENST00000625943 69 ntBASIC1.38□□□□□ -2.19
VCPIP1Q96JH7 AL512310.12-203ENST00000640543 90 ntBASIC1.38□□□□□ -2.19
VCPIP1Q96JH7 RNU6-832P-201ENST00000363319 107 ntBASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.601-201ENST00000410500 113 ntBASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 MTATP8P2-201ENST00000435212 202 ntBASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 AL353813.1-201ENST00000440700 253 ntBASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 RNU7-79P-201ENST00000516082 62 ntBASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 RNU7-35P-201ENST00000517174 62 ntBASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 MIR4694-201ENST00000578534 80 ntBASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.10-201ENST00000362371 110 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.93-201ENST00000363066 109 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.107-201ENST00000363190 121 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 SNORA25.3-201ENST00000363205 127 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 SNORD115-35-201ENST00000365122 82 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 MIR488-201ENST00000365739 83 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 RNU6-49P-201ENST00000384256 107 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 RNU6-795P-201ENST00000516323 103 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 AL357312.1-201ENST00000603879 298 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 MIR2052-201ENST00000636055 55 ntBASIC1.36□□□□□ -2.19
VCPIP1Q96JH7 RNA5SP48-201ENST00000363969 126 ntBASIC1.35□□□□□ -2.19
VCPIP1Q96JH7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
VCPIP1Q96JH7 RNU7-2P-201ENST00000516096 62 ntBASIC1.35□□□□□ -2.19
VCPIP1Q96JH7 SNORD67.1-201ENST00000516618 108 ntBASIC1.35□□□□□ -2.19
VCPIP1Q96JH7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.35□□□□□ -2.19
VCPIP1Q96JH7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 RNU6-294P-201ENST00000364999 102 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 RNU6-1201P-201ENST00000384227 107 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.540-201ENST00000384638 111 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 RNY1P7-201ENST00000384743 110 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 MIR206-201ENST00000384872 86 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 RNA5SP237-201ENST00000410414 113 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 snoU13.25-201ENST00000458945 104 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 RPL30P7-201ENST00000479312 323 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.659-201ENST00000515994 113 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 RNU6-1018P-201ENST00000516577 106 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 RN7SKP88-201ENST00000516847 250 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 7SK.8-201ENST00000612110 250 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 7SK.11-201ENST00000615477 250 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 AC012531.4-201ENST00000616509 177 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 AC105081.1-201ENST00000617727 106 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 7SK.13-201ENST00000622040 250 ntBASIC1.34□□□□□ -2.19
VCPIP1Q96JH7 Y_RNA.220-201ENST00000364244 109 ntBASIC1.33□□□□□ -2.2
VCPIP1Q96JH7 RNU6-1307P-201ENST00000391012 103 ntBASIC1.33□□□□□ -2.2
VCPIP1Q96JH7 AC244023.1-201ENST00000426884 112 ntBASIC1.33□□□□□ -2.2
VCPIP1Q96JH7 RPL39P39-201ENST00000455840 151 ntBASIC1.33□□□□□ -2.2
VCPIP1Q96JH7 RNA5SP480-201ENST00000516840 109 ntBASIC1.33□□□□□ -2.2
VCPIP1Q96JH7 RNU6-158P-201ENST00000517104 100 ntBASIC1.33□□□□□ -2.2
VCPIP1Q96JH7 MIR548Z-201ENST00000584743 97 ntBASIC1.33□□□□□ -2.2
VCPIP1Q96JH7 AC242498.1-201ENST00000604134 111 ntBASIC1.33□□□□□ -2.2
VCPIP1Q96JH7 AL442128.1-201ENST00000615151 90 ntBASIC1.33□□□□□ -2.2
VCPIP1Q96JH7 MIR96-201ENST00000362288 78 ntBASIC1.32□□□□□ -2.2
VCPIP1Q96JH7 RNU6-1313P-201ENST00000362622 102 ntBASIC1.32□□□□□ -2.2
VCPIP1Q96JH7 RNU6-170P-201ENST00000362832 104 ntBASIC1.32□□□□□ -2.2
VCPIP1Q96JH7 Y_RNA.448-201ENST00000384185 108 ntBASIC1.32□□□□□ -2.2
VCPIP1Q96JH7 RNU6-644P-201ENST00000391155 98 ntBASIC1.32□□□□□ -2.2
VCPIP1Q96JH7 MIR1302-7-201ENST00000408841 72 ntBASIC1.32□□□□□ -2.2
VCPIP1Q96JH7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
VCPIP1Q96JH7 RNU7-61P-201ENST00000515897 61 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 244.8 ms