Protein–RNA interactions for Protein: Q96JC1

VPS39, Vam6/Vps39-like protein, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39Q96JC1 RNU6-588P-201ENST00000410281 105 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 RNU6-863P-201ENST00000515989 104 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 RNA5SP268-201ENST00000516828 124 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 RNU7-35P-201ENST00000517174 62 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 AP003327.1-201ENST00000529684 127 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.2□□□□□ -2.38
VPS39Q96JC1 AC130289.1-201ENST00000577321 73 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 MIR548AE2-201ENST00000583456 67 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 AL359881.1-201ENST00000602916 267 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 MIR7107-201ENST00000611489 80 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 Y_RNA.83-201ENST00000363005 113 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 RNA5SP133-201ENST00000363368 119 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 Y_RNA.200-201ENST00000364018 102 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 RNU6-187P-201ENST00000384139 106 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 MIR193B-201ENST00000384907 83 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
VPS39Q96JC1 Y_RNA.793-201ENST00000411222 111 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 MIR1270-201ENST00000459320 83 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 RNU6-240P-201ENST00000516098 97 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 RNU6-469P-201ENST00000516253 101 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 RNU6-765P-201ENST00000516916 99 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 MIR3149-201ENST00000584629 83 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.19□□□□□ -2.38
VPS39Q96JC1 AC105081.1-201ENST00000617727 106 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 MIR3658-201ENST00000636291 56 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 U6.109-201ENST00000636749 87 ntBASIC0.19□□□□□ -2.38
VPS39Q96JC1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
VPS39Q96JC1 Y_RNA.274-201ENST00000364714 101 ntBASIC0.18□□□□□ -2.38
VPS39Q96JC1 Y_RNA.497-201ENST00000384447 98 ntBASIC0.18□□□□□ -2.38
VPS39Q96JC1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.18□□□□□ -2.38
VPS39Q96JC1 AL022718.1-201ENST00000412004 84 ntBASIC0.18□□□□□ -2.38
VPS39Q96JC1 SNORD67.1-201ENST00000516618 108 ntBASIC0.18□□□□□ -2.38
VPS39Q96JC1 RNA5SP480-201ENST00000516840 109 ntBASIC0.18□□□□□ -2.38
VPS39Q96JC1 DEFB131E-201ENST00000532329 154 ntBASIC0.18□□□□□ -2.38
VPS39Q96JC1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.18□□□□□ -2.38
VPS39Q96JC1 MIR6755-201ENST00000619993 66 ntBASIC0.18□□□□□ -2.38
VPS39Q96JC1 RNU6-690P-201ENST00000365242 106 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 Y_RNA.452-201ENST00000384202 108 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 SNORD28-201ENST00000384706 75 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 RNA5SP47-201ENST00000517230 109 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 AC138749.4-201ENST00000563970 127 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 AC141273.2-201ENST00000618989 130 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
VPS39Q96JC1 SNORD115-2-201ENST00000362842 82 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 SNORD114-26-201ENST00000363543 72 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 RNU6-1020P-201ENST00000363684 107 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 Y_RNA.233-201ENST00000364407 101 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 RNU6-818P-201ENST00000364837 108 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 SNORD115-20-201ENST00000365099 82 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 Y_RNA.515-201ENST00000384535 112 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 Y_RNA.531-201ENST00000384589 121 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 RNU6-893P-201ENST00000458841 100 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 RNU7-137P-201ENST00000516788 62 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 MIR4752-201ENST00000579672 72 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 MIR4305-201ENST00000583252 102 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 AC009779.6-201ENST00000603972 165 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 AC244669.1-204ENST00000621564 178 ntBASIC0.16□□□□□ -2.38
VPS39Q96JC1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.15□□□□□ -2.39
VPS39Q96JC1 Y_RNA.435-201ENST00000384095 112 ntBASIC0.15□□□□□ -2.39
VPS39Q96JC1 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
VPS39Q96JC1 RNA5SP227-201ENST00000516184 113 ntBASIC0.15□□□□□ -2.39
VPS39Q96JC1 MIR6828-201ENST00000636181 60 ntBASIC0.15□□□□□ -2.39
VPS39Q96JC1 MIR6844-201ENST00000637122 62 ntBASIC0.15□□□□□ -2.39
VPS39Q96JC1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.15□□□□□ -2.39
VPS39Q96JC1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 RNU6-309P-201ENST00000364573 106 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 RNU2-59P-201ENST00000410482 191 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 AC108059.2-201ENST00000434626 151 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 Y_RNA.651-201ENST00000459380 103 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 AC107027.2-201ENST00000512197 115 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 SNORA62.5-201ENST00000516634 120 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 AC069113.3-201ENST00000521019 150 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS39Q96JC1 MIR1273G-201ENST00000577677 100 ntBASIC0.14□□□□□ -2.39
VPS39Q96JC1 Y_RNA.49-201ENST00000362714 112 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 RNU6-312P-201ENST00000364629 107 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 Y_RNA.337-201ENST00000365312 102 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 PCNPP3-201ENST00000393579 471 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 Y_RNA.686-201ENST00000516548 134 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 MIR4514-201ENST00000581410 57 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 AC021443.1-201ENST00000604478 211 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 AL353621.2-201ENST00000605340 133 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 TUG1_4.1-201ENST00000619464 181 ntBASIC0.13□□□□□ -2.39
VPS39Q96JC1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.12□□□□□ -2.39
VPS39Q96JC1 RNY1P2-201ENST00000364820 117 ntBASIC0.12□□□□□ -2.39
VPS39Q96JC1 Y_RNA.357-201ENST00000365487 109 ntBASIC0.12□□□□□ -2.39
VPS39Q96JC1 RNU6-716P-201ENST00000365621 103 ntBASIC0.12□□□□□ -2.39
VPS39Q96JC1 RNU6-463P-201ENST00000384340 107 ntBASIC0.12□□□□□ -2.39
VPS39Q96JC1 SNORA75.5-201ENST00000391291 81 ntBASIC0.12□□□□□ -2.39
VPS39Q96JC1 RNU7-164P-201ENST00000459221 62 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 243.8 ms