Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNU6-971P-201ENST00000516920 106 ntBASIC1.1□□□□□ -2.23
HPS3Q969F9 IGKV1-22-201ENST00000524313 326 ntBASIC1.1□□□□□ -2.23
HPS3Q969F9 MIR4676-201ENST00000583078 72 ntBASIC1.1□□□□□ -2.23
HPS3Q969F9 SNORD114-26-201ENST00000363543 72 ntBASIC1.09□□□□□ -2.23
HPS3Q969F9 Y_RNA.213-201ENST00000364178 111 ntBASIC1.09□□□□□ -2.23
HPS3Q969F9 RNY1P13-201ENST00000365030 105 ntBASIC1.09□□□□□ -2.23
HPS3Q969F9 MIR598-201ENST00000384868 97 ntBASIC1.09□□□□□ -2.23
HPS3Q969F9 SUMO1P3-201ENST00000439961 304 ntBASIC1.09□□□□□ -2.23
HPS3Q969F9 RNU6-364P-201ENST00000384387 107 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 MIR520F-201ENST00000384824 87 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 MIR125B2-201ENST00000385128 89 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 SNORD105-201ENST00000386910 85 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 MIR938-201ENST00000401216 83 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 AC015818.7-201ENST00000428754 109 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 AC087499.7-201ENST00000441958 109 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 TMSB4XP3-201ENST00000445144 114 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 COX6CP6-201ENST00000490840 228 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 AC020891.4-201ENST00000605745 93 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.08□□□□□ -2.24
HPS3Q969F9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
HPS3Q969F9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.07□□□□□ -2.24
HPS3Q969F9 RNU1-36P-201ENST00000365130 165 ntBASIC1.07□□□□□ -2.24
HPS3Q969F9 AC022523.2-201ENST00000561045 150 ntBASIC1.07□□□□□ -2.24
HPS3Q969F9 MIR4804-201ENST00000581683 73 ntBASIC1.07□□□□□ -2.24
HPS3Q969F9 RNU6-369P-201ENST00000362515 102 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 Y_RNA.198-201ENST00000364013 98 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-80P-201ENST00000384195 107 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 Y_RNA.528-201ENST00000384575 108 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU1-119P-201ENST00000391122 165 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-447P-201ENST00000410293 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-1118P-201ENST00000410382 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-1076P-201ENST00000410397 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-355P-201ENST00000410427 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-791P-201ENST00000410467 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-705P-201ENST00000410601 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-1100P-201ENST00000410691 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-860P-201ENST00000410860 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-1217P-201ENST00000411276 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-785P-201ENST00000411324 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 RPL39P28-201ENST00000465655 155 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
HPS3Q969F9 RNU6-781P-201ENST00000516377 101 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 MIR3163-201ENST00000581592 73 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 U6.90-201ENST00000614007 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 U6.70-201ENST00000620287 104 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
HPS3Q969F9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HPS3Q969F9 Y_RNA.36-201ENST00000362602 112 ntBASIC1.05□□□□□ -2.24
HPS3Q969F9 RNU6-1104P-201ENST00000384723 104 ntBASIC1.05□□□□□ -2.24
HPS3Q969F9 U8.15-201ENST00000390947 134 ntBASIC1.05□□□□□ -2.24
HPS3Q969F9 RNU7-156P-201ENST00000517214 74 ntBASIC1.05□□□□□ -2.24
HPS3Q969F9 AC025166.1-201ENST00000612411 163 ntBASIC1.05□□□□□ -2.24
HPS3Q969F9 AL589743.1-201ENST00000551932 2712 ntBASIC1.05□□□□□ -2.24
HPS3Q969F9 SNORD114-10-201ENST00000363409 72 ntBASIC1.04□□□□□ -2.24
HPS3Q969F9 SNORD58C-201ENST00000365223 64 ntBASIC1.04□□□□□ -2.24
HPS3Q969F9 Y_RNA.346-201ENST00000365385 112 ntBASIC1.04□□□□□ -2.24
HPS3Q969F9 RNU4-83P-201ENST00000410863 133 ntBASIC1.04□□□□□ -2.24
HPS3Q969F9 RNU7-6P-201ENST00000516845 62 ntBASIC1.04□□□□□ -2.24
HPS3Q969F9 FAM71BP1-201ENST00000604431 523 ntBASIC1.04□□□□□ -2.24
HPS3Q969F9 PVT1_3.1-201ENST00000620853 95 ntBASIC1.04□□□□□ -2.24
HPS3Q969F9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HPS3Q969F9 MIR520H-201ENST00000385126 88 ntBASIC1.03□□□□□ -2.24
HPS3Q969F9 RNU7-56P-201ENST00000458744 62 ntBASIC1.03□□□□□ -2.24
HPS3Q969F9 RNU6-772P-201ENST00000516042 105 ntBASIC1.03□□□□□ -2.24
HPS3Q969F9 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
HPS3Q969F9 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
HPS3Q969F9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.03□□□□□ -2.24
HPS3Q969F9 RNU6-403P-201ENST00000363163 104 ntBASIC1.02□□□□□ -2.25
HPS3Q969F9 SNORD67.1-201ENST00000516618 108 ntBASIC1.02□□□□□ -2.25
HPS3Q969F9 AC133485.1-201ENST00000567176 124 ntBASIC1.02□□□□□ -2.25
HPS3Q969F9 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
HPS3Q969F9 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
HPS3Q969F9 SNORD92-201ENST00000585078 85 ntBASIC1.02□□□□□ -2.25
HPS3Q969F9 AL157777.2-201ENST00000258070 137 ntBASIC1.01□□□□□ -2.25
HPS3Q969F9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.01□□□□□ -2.25
HPS3Q969F9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HPS3Q969F9 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
HPS3Q969F9 RNU7-137P-201ENST00000516788 62 ntBASIC1.01□□□□□ -2.25
HPS3Q969F9 Y_RNA.71-201ENST00000362892 104 ntBASIC1□□□□□ -2.25
HPS3Q969F9 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
HPS3Q969F9 MIRLET7F2-201ENST00000385277 83 ntBASIC1□□□□□ -2.25
HPS3Q969F9 RNU7-102P-201ENST00000458948 62 ntBASIC1□□□□□ -2.25
HPS3Q969F9 RNU6-1234P-201ENST00000516877 103 ntBASIC1□□□□□ -2.25
HPS3Q969F9 MIR4491-201ENST00000581087 68 ntBASIC1□□□□□ -2.25
HPS3Q969F9 AL353765.1-201ENST00000605514 183 ntBASIC1□□□□□ -2.25
HPS3Q969F9 MTND5P18-201ENST00000445624 1801 ntBASIC1□□□□□ -2.25
HPS3Q969F9 RNY4P6-201ENST00000363667 96 ntBASIC0.99□□□□□ -2.25
HPS3Q969F9 SNORA72.6-201ENST00000384520 129 ntBASIC0.99□□□□□ -2.25
HPS3Q969F9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.99□□□□□ -2.25
HPS3Q969F9 RNU7-107P-201ENST00000459121 61 ntBASIC0.99□□□□□ -2.25
HPS3Q969F9 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
HPS3Q969F9 MIR6779-201ENST00000617283 64 ntBASIC0.99□□□□□ -2.25
HPS3Q969F9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
HPS3Q969F9 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
HPS3Q969F9 RNU6-81P-201ENST00000365608 104 ntBASIC0.98□□□□□ -2.25
HPS3Q969F9 RNU6-959P-201ENST00000384671 107 ntBASIC0.98□□□□□ -2.25
HPS3Q969F9 MIR1270-201ENST00000459320 83 ntBASIC0.98□□□□□ -2.25
HPS3Q969F9 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
HPS3Q969F9 DEFB131E-201ENST00000532329 154 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms