Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SNORD115-2-201ENST00000362842 82 ntBASIC-0.23□□□□□ -2.45
PTP4A1Q93096 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.23□□□□□ -2.45
PTP4A1Q93096 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.23□□□□□ -2.45
PTP4A1Q93096 SNORD115-20-201ENST00000365099 82 ntBASIC-0.23□□□□□ -2.45
PTP4A1Q93096 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.23□□□□□ -2.45
PTP4A1Q93096 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.23□□□□□ -2.45
PTP4A1Q93096 MIR5706-201ENST00000579841 80 ntBASIC-0.23□□□□□ -2.45
PTP4A1Q93096 AL360085.1-201ENST00000604713 532 ntBASIC-0.23□□□□□ -2.45
PTP4A1Q93096 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.23□□□□□ -2.45
PTP4A1Q93096 RNA5SP457-201ENST00000363657 124 ntBASIC-0.24□□□□□ -2.45
PTP4A1Q93096 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.24□□□□□ -2.45
PTP4A1Q93096 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.24□□□□□ -2.45
PTP4A1Q93096 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.24□□□□□ -2.45
PTP4A1Q93096 MT-TW-201ENST00000387382 68 ntBASIC-0.24□□□□□ -2.45
PTP4A1Q93096 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.24□□□□□ -2.45
PTP4A1Q93096 RNU2-4P-201ENST00000606190 192 ntBASIC-0.24□□□□□ -2.45
PTP4A1Q93096 AL109933.3-201ENST00000619095 188 ntBASIC-0.24□□□□□ -2.45
PTP4A1Q93096 MIR499B-201ENST00000636498 73 ntBASIC-0.24□□□□□ -2.45
PTP4A1Q93096 SNORD114-10-201ENST00000363409 72 ntBASIC-0.25□□□□□ -2.45
PTP4A1Q93096 SNORA63.5-201ENST00000363548 123 ntBASIC-0.25□□□□□ -2.45
PTP4A1Q93096 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.25□□□□□ -2.45
PTP4A1Q93096 RNU6-269P-201ENST00000391077 97 ntBASIC-0.25□□□□□ -2.45
PTP4A1Q93096 AC244505.6-201ENST00000452829 130 ntBASIC-0.25□□□□□ -2.45
PTP4A1Q93096 RNU7-159P-201ENST00000459284 62 ntBASIC-0.25□□□□□ -2.45
PTP4A1Q93096 AC006504.6-201ENST00000590142 199 ntBASIC-0.25□□□□□ -2.45
PTP4A1Q93096 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.25□□□□□ -2.45
PTP4A1Q93096 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.26□□□□□ -2.45
PTP4A1Q93096 RNA5SP245-201ENST00000364239 121 ntBASIC-0.26□□□□□ -2.45
PTP4A1Q93096 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.26□□□□□ -2.45
PTP4A1Q93096 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
PTP4A1Q93096 MIR4752-201ENST00000579672 72 ntBASIC-0.26□□□□□ -2.45
PTP4A1Q93096 MIR6779-201ENST00000617283 64 ntBASIC-0.26□□□□□ -2.45
PTP4A1Q93096 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.27□□□□□ -2.45
PTP4A1Q93096 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.27□□□□□ -2.45
PTP4A1Q93096 RNU6-726P-201ENST00000364680 107 ntBASIC-0.27□□□□□ -2.45
PTP4A1Q93096 RNU6-690P-201ENST00000365242 106 ntBASIC-0.27□□□□□ -2.45
PTP4A1Q93096 SNORA32-201ENST00000384072 121 ntBASIC-0.27□□□□□ -2.45
PTP4A1Q93096 RNU6V-201ENST00000384105 107 ntBASIC-0.27□□□□□ -2.45
PTP4A1Q93096 AC011603.4-201ENST00000611325 277 ntBASIC-0.27□□□□□ -2.45
PTP4A1Q93096 AC067863.3-201ENST00000624172 122 ntBASIC-0.27□□□□□ -2.45
PTP4A1Q93096 AC073869.9-201ENST00000641610 120 ntBASIC-0.27□□□□□ -2.45
PTP4A1Q93096 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 RNU6-429P-201ENST00000384582 108 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 RNU6-493P-201ENST00000391321 108 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 MIR548H2-201ENST00000408874 88 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.28□□□□□ -2.45
PTP4A1Q93096 MTATP6P21-201ENST00000440681 189 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 MTATP8P1-201ENST00000467115 207 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 RNU7-137P-201ENST00000516788 62 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 AC138749.4-201ENST00000563970 127 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 MIR4643-201ENST00000577473 78 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 AC011921.3-201ENST00000605540 361 ntBASIC-0.28□□□□□ -2.45
PTP4A1Q93096 RNU6-275P-201ENST00000364910 107 ntBASIC-0.29□□□□□ -2.46
PTP4A1Q93096 RNU6-702P-201ENST00000364982 107 ntBASIC-0.29□□□□□ -2.46
PTP4A1Q93096 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.29□□□□□ -2.46
PTP4A1Q93096 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.29□□□□□ -2.46
PTP4A1Q93096 MIR4305-201ENST00000583252 102 ntBASIC-0.29□□□□□ -2.46
PTP4A1Q93096 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.29□□□□□ -2.46
PTP4A1Q93096 AL162376.1-201ENST00000624117 175 ntBASIC-0.29□□□□□ -2.46
PTP4A1Q93096 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.3□□□□□ -2.46
PTP4A1Q93096 RNY1P2-201ENST00000364820 117 ntBASIC-0.3□□□□□ -2.46
PTP4A1Q93096 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.3□□□□□ -2.46
PTP4A1Q93096 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.3□□□□□ -2.46
PTP4A1Q93096 RNU7-104P-201ENST00000459398 79 ntBASIC-0.3□□□□□ -2.46
PTP4A1Q93096 SNORD67.1-201ENST00000516618 108 ntBASIC-0.3□□□□□ -2.46
PTP4A1Q93096 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.31□□□□□ -2.46
PTP4A1Q93096 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.31□□□□□ -2.46
PTP4A1Q93096 RNY4P28-201ENST00000365281 93 ntBASIC-0.31□□□□□ -2.46
PTP4A1Q93096 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.31□□□□□ -2.46
PTP4A1Q93096 RNY3P16-201ENST00000516338 101 ntBASIC-0.31□□□□□ -2.46
PTP4A1Q93096 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.31□□□□□ -2.46
PTP4A1Q93096 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.31□□□□□ -2.46
PTP4A1Q93096 RNU6-756P-201ENST00000383997 107 ntBASIC-0.32□□□□□ -2.46
PTP4A1Q93096 RNU6-472P-201ENST00000384299 107 ntBASIC-0.32□□□□□ -2.46
PTP4A1Q93096 MIR635-201ENST00000384830 98 ntBASIC-0.32□□□□□ -2.46
PTP4A1Q93096 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.32□□□□□ -2.46
PTP4A1Q93096 MIR548AE2-201ENST00000583456 67 ntBASIC-0.32□□□□□ -2.46
PTP4A1Q93096 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.33□□□□□ -2.46
PTP4A1Q93096 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.34□□□□□ -2.46
PTP4A1Q93096 RNU6-302P-201ENST00000365249 107 ntBASIC-0.34□□□□□ -2.46
PTP4A1Q93096 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.34□□□□□ -2.46
PTP4A1Q93096 RNU6-929P-201ENST00000384429 107 ntBASIC-0.34□□□□□ -2.46
PTP4A1Q93096 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.34□□□□□ -2.46
PTP4A1Q93096 RNU7-165P-201ENST00000458864 60 ntBASIC-0.34□□□□□ -2.46
PTP4A1Q93096 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
PTP4A1Q93096 MIR548AD-201ENST00000584780 82 ntBASIC-0.34□□□□□ -2.46
PTP4A1Q93096 RNU1-29P-201ENST00000606574 126 ntBASIC-0.34□□□□□ -2.46
PTP4A1Q93096 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.35□□□□□ -2.47
PTP4A1Q93096 RNU6-923P-201ENST00000364753 107 ntBASIC-0.35□□□□□ -2.47
PTP4A1Q93096 MIR7-2-201ENST00000384970 110 ntBASIC-0.35□□□□□ -2.47
PTP4A1Q93096 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.35□□□□□ -2.47
PTP4A1Q93096 RNU7-161P-201ENST00000517289 62 ntBASIC-0.35□□□□□ -2.47
PTP4A1Q93096 RNU2-60P-201ENST00000517290 128 ntBASIC-0.35□□□□□ -2.47
PTP4A1Q93096 AC138907.4-201ENST00000570107 226 ntBASIC-0.35□□□□□ -2.47
PTP4A1Q93096 RNU6-818P-201ENST00000364837 108 ntBASIC-0.36□□□□□ -2.47
PTP4A1Q93096 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.36□□□□□ -2.47
PTP4A1Q93096 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.36□□□□□ -2.47
PTP4A1Q93096 MIR501-201ENST00000390204 84 ntBASIC-0.36□□□□□ -2.47
PTP4A1Q93096 SNORD77B-201ENST00000391112 67 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms