Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Y_RNA.360-201ENST00000365512 102 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 RNU6-409P-201ENST00000384114 104 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 RNU6-1237P-201ENST00000384777 107 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 RNU6-205P-201ENST00000390858 107 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 RNU6-1307P-201ENST00000391012 103 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 RNU6-1165P-201ENST00000410119 107 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 RNU6-733P-201ENST00000410759 104 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 BTF3P4-201ENST00000418852 495 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 RNU7-62P-201ENST00000458856 62 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 RNU6-521P-201ENST00000516663 105 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 MIR4694-201ENST00000578534 80 ntBASIC1.54□□□□□ -2.16
ERCC4Q92889 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
ERCC4Q92889 RNU6-1099P-201ENST00000363533 107 ntBASIC1.53□□□□□ -2.16
ERCC4Q92889 MIR605-201ENST00000385078 83 ntBASIC1.53□□□□□ -2.16
ERCC4Q92889 MIR577-201ENST00000385196 96 ntBASIC1.53□□□□□ -2.16
ERCC4Q92889 RNA5SP95-201ENST00000410319 137 ntBASIC1.53□□□□□ -2.16
ERCC4Q92889 RNA5SP237-201ENST00000410414 113 ntBASIC1.53□□□□□ -2.16
ERCC4Q92889 RNU6-904P-201ENST00000516206 101 ntBASIC1.53□□□□□ -2.16
ERCC4Q92889 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.53□□□□□ -2.16
ERCC4Q92889 RNU6-1313P-201ENST00000362622 102 ntBASIC1.52□□□□□ -2.17
ERCC4Q92889 Y_RNA.155-201ENST00000363632 101 ntBASIC1.52□□□□□ -2.17
ERCC4Q92889 Y_RNA.377-201ENST00000365644 108 ntBASIC1.52□□□□□ -2.17
ERCC4Q92889 RNU6-756P-201ENST00000383997 107 ntBASIC1.52□□□□□ -2.17
ERCC4Q92889 MT-TF-201ENST00000387314 71 ntBASIC1.52□□□□□ -2.17
ERCC4Q92889 AC096949.1-201ENST00000412047 152 ntBASIC1.52□□□□□ -2.17
ERCC4Q92889 AP1B1P2-201ENST00000416196 106 ntBASIC1.52□□□□□ -2.17
ERCC4Q92889 MIR26B-201ENST00000362251 77 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNY3P2-201ENST00000362918 102 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 SNORA51.5-201ENST00000384126 131 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 SNORD26-201ENST00000384147 75 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-1113P-201ENST00000384348 107 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-447P-201ENST00000410293 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-1118P-201ENST00000410382 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-1076P-201ENST00000410397 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-355P-201ENST00000410427 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-791P-201ENST00000410467 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-705P-201ENST00000410601 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-1100P-201ENST00000410691 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-860P-201ENST00000410860 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-1217P-201ENST00000411276 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-785P-201ENST00000411324 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU7-21P-201ENST00000459430 62 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 SNORD79.1-201ENST00000516069 84 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 AC036111.3-201ENST00000526389 112 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 MIR4781-201ENST00000585250 76 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 U6.90-201ENST00000614007 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 U6.70-201ENST00000620287 104 ntBASIC1.51□□□□□ -2.17
ERCC4Q92889 RNU6-32P-201ENST00000383948 107 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 RNU6-1201P-201ENST00000384227 107 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 RNU6-13P-201ENST00000384248 107 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 RNU6-12P-201ENST00000384604 107 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 RNU6-41P-201ENST00000384741 107 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 RNU6-1321P-201ENST00000390905 107 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 SNORA19.1-201ENST00000410656 129 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 SNORA7.5-201ENST00000410672 110 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 MIR18B-201ENST00000454574 71 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 RNU6-1006P-201ENST00000516998 103 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 SNORA4-201ENST00000584302 138 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.5□□□□□ -2.17
ERCC4Q92889 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
ERCC4Q92889 RNU6-832P-201ENST00000363319 107 ntBASIC1.49□□□□□ -2.17
ERCC4Q92889 SNORA80D-201ENST00000384488 135 ntBASIC1.49□□□□□ -2.17
ERCC4Q92889 RNU6-939P-201ENST00000384634 107 ntBASIC1.49□□□□□ -2.17
ERCC4Q92889 AL591704.2-201ENST00000421658 181 ntBASIC1.49□□□□□ -2.17
ERCC4Q92889 UBL5P1-201ENST00000507979 193 ntBASIC1.49□□□□□ -2.17
ERCC4Q92889 Y_RNA.818-201ENST00000618813 71 ntBASIC1.49□□□□□ -2.17
ERCC4Q92889 Y_RNA.226-201ENST00000364337 114 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 SNORD113.3-201ENST00000364630 78 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 Y_RNA.495-201ENST00000384435 112 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 MIR590-201ENST00000385008 97 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 MIR758-201ENST00000390227 88 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 RNU6-910P-201ENST00000390844 107 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 U8.15-201ENST00000390947 134 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 MIR1287-201ENST00000408492 90 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 RNU6-168P-201ENST00000516189 101 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 AC012676.2-201ENST00000619258 186 ntBASIC1.48□□□□□ -2.17
ERCC4Q92889 Y_RNA.448-201ENST00000384185 108 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 RNA5SP89-201ENST00000410300 108 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 AC004223.1-201ENST00000479840 271 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 TRMT112P2-201ENST00000512910 132 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 RNU1-92P-201ENST00000517017 135 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 MIR376B-201ENST00000614515 100 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 AC106800.4-201ENST00000614905 153 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 AC105081.1-201ENST00000617727 106 ntBASIC1.47□□□□□ -2.17
ERCC4Q92889 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ERCC4Q92889 MIR34C-201ENST00000384831 77 ntBASIC1.46□□□□□ -2.18
ERCC4Q92889 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ERCC4Q92889 RNU7-48P-201ENST00000458875 63 ntBASIC1.46□□□□□ -2.18
ERCC4Q92889 RNU6-158P-201ENST00000517104 100 ntBASIC1.46□□□□□ -2.18
ERCC4Q92889 DEFB131E-201ENST00000532329 154 ntBASIC1.46□□□□□ -2.18
ERCC4Q92889 AC141557.1-201ENST00000540982 400 ntBASIC1.46□□□□□ -2.18
ERCC4Q92889 AL359821.1-201ENST00000605519 182 ntBASIC1.46□□□□□ -2.18
ERCC4Q92889 AL442128.1-201ENST00000615151 90 ntBASIC1.46□□□□□ -2.18
ERCC4Q92889 AP001318.4-201ENST00000616637 121 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms