Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU6-647P-201ENST00000364243 107 ntBASIC0.91□□□□□ -2.26
HMGB4Q8WW32 SNORA22-201ENST00000383907 134 ntBASIC0.91□□□□□ -2.26
HMGB4Q8WW32 SNORA22C-201ENST00000384614 134 ntBASIC0.91□□□□□ -2.26
HMGB4Q8WW32 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HMGB4Q8WW32 U8.15-201ENST00000390947 134 ntBASIC0.91□□□□□ -2.26
HMGB4Q8WW32 MIR938-201ENST00000401216 83 ntBASIC0.91□□□□□ -2.26
HMGB4Q8WW32 RNU7-56P-201ENST00000458744 62 ntBASIC0.91□□□□□ -2.26
HMGB4Q8WW32 RNU7-79P-201ENST00000516082 62 ntBASIC0.91□□□□□ -2.26
HMGB4Q8WW32 TUG1_4.1-201ENST00000619464 181 ntBASIC0.91□□□□□ -2.26
HMGB4Q8WW32 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.91□□□□□ -2.26
HMGB4Q8WW32 SNORA32-201ENST00000384072 121 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 MIR608-201ENST00000384820 100 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 SNORA40-201ENST00000388090 126 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 SNORD99-201ENST00000408612 74 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 RNU6-257P-201ENST00000410238 98 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 AC096949.1-201ENST00000412047 152 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 RPL39P25-201ENST00000449384 154 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 RN7SKP19-201ENST00000516016 252 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 Y_RNA.703-201ENST00000516846 111 ntBASIC0.9□□□□□ -2.27
HMGB4Q8WW32 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HMGB4Q8WW32 Y_RNA.299-201ENST00000364973 94 ntBASIC0.89□□□□□ -2.27
HMGB4Q8WW32 RNU6-746P-201ENST00000384112 109 ntBASIC0.89□□□□□ -2.27
HMGB4Q8WW32 SNORD93-201ENST00000408813 74 ntBASIC0.89□□□□□ -2.27
HMGB4Q8WW32 AL158147.1-201ENST00000443970 75 ntBASIC0.89□□□□□ -2.27
HMGB4Q8WW32 MIR3133-201ENST00000583157 78 ntBASIC0.89□□□□□ -2.27
HMGB4Q8WW32 SNORD92-201ENST00000585078 85 ntBASIC0.89□□□□□ -2.27
HMGB4Q8WW32 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
HMGB4Q8WW32 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HMGB4Q8WW32 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HMGB4Q8WW32 MIR520H-201ENST00000385126 88 ntBASIC0.88□□□□□ -2.27
HMGB4Q8WW32 RNU4-69P-201ENST00000410677 143 ntBASIC0.88□□□□□ -2.27
HMGB4Q8WW32 MIR1270-201ENST00000459320 83 ntBASIC0.88□□□□□ -2.27
HMGB4Q8WW32 RNU7-156P-201ENST00000517214 74 ntBASIC0.88□□□□□ -2.27
HMGB4Q8WW32 AC022523.2-201ENST00000561045 150 ntBASIC0.88□□□□□ -2.27
HMGB4Q8WW32 RNU6-774P-201ENST00000363238 107 ntBASIC0.87□□□□□ -2.27
HMGB4Q8WW32 RNU6-364P-201ENST00000384387 107 ntBASIC0.87□□□□□ -2.27
HMGB4Q8WW32 RNU6-1104P-201ENST00000384723 104 ntBASIC0.87□□□□□ -2.27
HMGB4Q8WW32 MIR605-201ENST00000385078 83 ntBASIC0.87□□□□□ -2.27
HMGB4Q8WW32 RNU1-119P-201ENST00000391122 165 ntBASIC0.87□□□□□ -2.27
HMGB4Q8WW32 Y_RNA.617-201ENST00000410920 90 ntBASIC0.87□□□□□ -2.27
HMGB4Q8WW32 RNU7-102P-201ENST00000458948 62 ntBASIC0.87□□□□□ -2.27
HMGB4Q8WW32 Y_RNA.588-201ENST00000391254 102 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-447P-201ENST00000410293 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-1118P-201ENST00000410382 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-1076P-201ENST00000410397 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-355P-201ENST00000410427 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-791P-201ENST00000410467 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-705P-201ENST00000410601 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-1100P-201ENST00000410691 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-860P-201ENST00000410860 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU4-83P-201ENST00000410863 133 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-1217P-201ENST00000411276 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RNU6-785P-201ENST00000411324 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGB4Q8WW32 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 AC008608.1-201ENST00000603910 127 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 U6.90-201ENST00000614007 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 U6.70-201ENST00000620287 104 ntBASIC0.86□□□□□ -2.27
HMGB4Q8WW32 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
HMGB4Q8WW32 AL589743.1-201ENST00000551932 2712 ntBASIC0.85□□□□□ -2.27
HMGB4Q8WW32 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
HMGB4Q8WW32 SNORD50.2-201ENST00000365465 70 ntBASIC0.85□□□□□ -2.27
HMGB4Q8WW32 Y_RNA.586-201ENST00000391146 98 ntBASIC0.85□□□□□ -2.27
HMGB4Q8WW32 RNU7-137P-201ENST00000516788 62 ntBASIC0.85□□□□□ -2.27
HMGB4Q8WW32 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
HMGB4Q8WW32 MIR4491-201ENST00000581087 68 ntBASIC0.85□□□□□ -2.27
HMGB4Q8WW32 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
HMGB4Q8WW32 MIR8066-201ENST00000617280 78 ntBASIC0.85□□□□□ -2.27
HMGB4Q8WW32 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HMGB4Q8WW32 RNA5SP325-201ENST00000363756 130 ntBASIC0.84□□□□□ -2.27
HMGB4Q8WW32 Y_RNA.205-201ENST00000364128 113 ntBASIC0.84□□□□□ -2.27
HMGB4Q8WW32 MIR573-201ENST00000384964 99 ntBASIC0.84□□□□□ -2.27
HMGB4Q8WW32 MIR216A-201ENST00000385063 110 ntBASIC0.84□□□□□ -2.27
HMGB4Q8WW32 RNA5SP136-201ENST00000410906 107 ntBASIC0.84□□□□□ -2.27
HMGB4Q8WW32 SNORD67.1-201ENST00000516618 108 ntBASIC0.84□□□□□ -2.27
HMGB4Q8WW32 AC011195.1-201ENST00000578177 177 ntBASIC0.84□□□□□ -2.27
HMGB4Q8WW32 AL359881.1-201ENST00000602916 267 ntBASIC0.84□□□□□ -2.27
HMGB4Q8WW32 RNU6-235P-201ENST00000362644 107 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 Y_RNA.42-201ENST00000362660 108 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 SNORD114-10-201ENST00000363409 72 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 RNY1P4-201ENST00000384595 115 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 MIR1263-201ENST00000408324 86 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 RNU6-781P-201ENST00000516377 101 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 AC090897.1-201ENST00000580909 226 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.83□□□□□ -2.28
HMGB4Q8WW32 RNU6-403P-201ENST00000363163 104 ntBASIC0.82□□□□□ -2.28
HMGB4Q8WW32 MIR539-201ENST00000365690 78 ntBASIC0.82□□□□□ -2.28
HMGB4Q8WW32 RNU6-187P-201ENST00000384139 106 ntBASIC0.82□□□□□ -2.28
HMGB4Q8WW32 MT-TI-201ENST00000387365 69 ntBASIC0.82□□□□□ -2.28
HMGB4Q8WW32 RN7SL793P-201ENST00000583259 296 ntBASIC0.82□□□□□ -2.28
HMGB4Q8WW32 Y_RNA.13-201ENST00000362403 112 ntBASIC0.81□□□□□ -2.28
HMGB4Q8WW32 Y_RNA.198-201ENST00000364013 98 ntBASIC0.81□□□□□ -2.28
HMGB4Q8WW32 MIRLET7F2-201ENST00000385277 83 ntBASIC0.81□□□□□ -2.28
HMGB4Q8WW32 SNORD77B-201ENST00000391112 67 ntBASIC0.81□□□□□ -2.28
HMGB4Q8WW32 RNU6-1211P-201ENST00000459179 105 ntBASIC0.81□□□□□ -2.28
HMGB4Q8WW32 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 260.7 ms