Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC245060.5-201ENST00000610778 3293 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 MIR489-201ENST00000384923 84 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 MIR548G-201ENST00000408442 89 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 RPL31P63-201ENST00000422565 375 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 AL161932.1-201ENST00000437408 146 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 RNU1-98P-201ENST00000458992 160 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 AC099513.1-201ENST00000490423 301 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 SNORA44.1-201ENST00000517031 108 ntBASIC1.96□□□□□ -2.1
SH3RF3Q8TEJ3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SH3RF3Q8TEJ3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SH3RF3Q8TEJ3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.95□□□□□ -2.1
SH3RF3Q8TEJ3 AL513043.2-201ENST00000573941 143 ntBASIC1.95□□□□□ -2.1
SH3RF3Q8TEJ3 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
SH3RF3Q8TEJ3 AL645939.4-201ENST00000604495 135 ntBASIC1.95□□□□□ -2.1
SH3RF3Q8TEJ3 AC145423.2-201ENST00000610631 239 ntBASIC1.95□□□□□ -2.1
SH3RF3Q8TEJ3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 MIR378A-201ENST00000362177 66 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 MIR499A-201ENST00000384903 122 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 MIR518E-201ENST00000385252 88 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 SNORA67.5-201ENST00000391036 107 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 AC245047.7-201ENST00000440265 293 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 AC004223.1-201ENST00000479840 271 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 RNVU1-2-201ENST00000516326 135 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 RNU7-137P-201ENST00000516788 62 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 RNA5SP437-201ENST00000517249 129 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 FAM106DP-201ENST00000586416 501 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 AC021506.2-201ENST00000612354 169 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 Z97988.1-201ENST00000637697 135 ntBASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.94□□□□□ -2.1
SH3RF3Q8TEJ3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 RNU6-478P-201ENST00000363904 110 ntBASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 AC087499.7-201ENST00000441958 109 ntBASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 RPS29P28-201ENST00000446439 141 ntBASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 AC093729.1-201ENST00000513074 128 ntBASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 RNU7-79P-201ENST00000516082 62 ntBASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 RNU6-90P-201ENST00000606352 106 ntBASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 AC105081.1-201ENST00000617727 106 ntBASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 Y_RNA.788-201ENST00000622394 112 ntBASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 SNORD3E-202ENST00000627253 216 ntBASIC1.93□□□□□ -2.1
SH3RF3Q8TEJ3 SNORA2B-201ENST00000384583 137 ntBASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 RNU6-296P-201ENST00000384608 107 ntBASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 MIR181B2-201ENST00000385004 89 ntBASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 MIR519C-201ENST00000385053 87 ntBASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 RNU6-602P-201ENST00000411155 105 ntBASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 AP1B1P2-201ENST00000416196 106 ntBASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 snoU13.16-201ENST00000459350 104 ntBASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 SUB1P4-201ENST00000566062 339 ntBASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.92□□□□□ -2.1
SH3RF3Q8TEJ3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 RNA5SP133-201ENST00000363368 119 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 SNORD114-10-201ENST00000363409 72 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 SNORA25.9-201ENST00000365087 128 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 RNU6-950P-201ENST00000384651 107 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 MIR7-2-201ENST00000384970 110 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 MIR660-201ENST00000385235 97 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 snoU13.18-201ENST00000459483 104 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 RNU7-153P-201ENST00000516455 62 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 MIR3198-2-201ENST00000577868 80 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 AC012676.2-201ENST00000619258 186 ntBASIC1.91□□□□□ -2.1
SH3RF3Q8TEJ3 RNU1-42P-201ENST00000364033 160 ntBASIC1.9□□□□□ -2.11
SH3RF3Q8TEJ3 MIR1323-201ENST00000408090 73 ntBASIC1.9□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.9□□□□□ -2.11
SH3RF3Q8TEJ3 SNORA74.3-201ENST00000517108 154 ntBASIC1.9□□□□□ -2.11
SH3RF3Q8TEJ3 snoU13.31-201ENST00000607291 104 ntBASIC1.9□□□□□ -2.11
SH3RF3Q8TEJ3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.9□□□□□ -2.11
SH3RF3Q8TEJ3 AL513423.1-201ENST00000621695 132 ntBASIC1.9□□□□□ -2.11
SH3RF3Q8TEJ3 WWP1P1-201ENST00000466609 2769 ntBASIC1.9□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-315P-201ENST00000362666 107 ntBASIC1.89□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-112P-201ENST00000363599 104 ntBASIC1.89□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-865P-201ENST00000364772 107 ntBASIC1.89□□□□□ -2.11
SH3RF3Q8TEJ3 SPINT5P-201ENST00000448174 155 ntBASIC1.89□□□□□ -2.11
SH3RF3Q8TEJ3 RNU7-48P-201ENST00000458875 63 ntBASIC1.89□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-917P-201ENST00000516294 104 ntBASIC1.89□□□□□ -2.11
SH3RF3Q8TEJ3 RNY1P13-201ENST00000365030 105 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 RNA5SP100-201ENST00000410903 110 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 RNA5SP59-201ENST00000410922 110 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 RNU7-95P-201ENST00000459222 64 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 AC008834.1-201ENST00000511612 175 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 MIR8070-201ENST00000616510 88 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.88□□□□□ -2.11
SH3RF3Q8TEJ3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-624P-201ENST00000363411 107 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 MIR520A-201ENST00000384862 85 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-447P-201ENST00000410293 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-355P-201ENST00000410427 104 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms