Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.31□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 SNORD49B-201ENST00000365172 72 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 RNU6-381P-201ENST00000391259 108 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 TRAJ51-201ENST00000504127 63 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 RNU6-758P-201ENST00000516292 89 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 SNORA40.15-201ENST00000516884 107 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 MIR548AG2-201ENST00000581228 64 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 MIR548AE1-201ENST00000583292 70 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 AC105081.1-201ENST00000617727 106 ntBASIC-0.32□□□□□ -2.46
LMX1AQ8TE12 MIR369-201ENST00000362155 70 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 U8.6-201ENST00000364939 135 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 RNA5SP169-201ENST00000517268 117 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 CR383656.4-201ENST00000546909 122 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 MIR4282-201ENST00000583613 67 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 MIR4493-201ENST00000584016 73 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 MIR4795-201ENST00000584182 89 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 AC006504.6-201ENST00000590142 199 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 AC073869.9-201ENST00000641610 120 ntBASIC-0.33□□□□□ -2.46
LMX1AQ8TE12 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 RNU6-978P-201ENST00000364371 103 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 MIR624-201ENST00000385217 97 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 AC096531.1-201ENST00000419107 107 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 AC109327.2-201ENST00000448339 378 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 MTND5P20-201ENST00000448677 143 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 MTND5P22-201ENST00000458380 195 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 AC082651.2-201ENST00000496833 166 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 RNY3P15-201ENST00000516297 97 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 SNORD67.1-201ENST00000516618 108 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 RNU7-137P-201ENST00000516788 62 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 RNU6-175P-201ENST00000516896 107 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 MIR378D2-201ENST00000580636 98 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 MIR3920-201ENST00000581751 86 ntBASIC-0.34□□□□□ -2.46
LMX1AQ8TE12 MIR148A-201ENST00000362215 68 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 RNU6-728P-201ENST00000365375 104 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 SNORA32-201ENST00000384072 121 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 RNA5SP144-201ENST00000410846 116 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 SNORD126-201ENST00000459475 77 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 RNU7-70P-201ENST00000516941 66 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 DEFB131E-201ENST00000532329 154 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 MIR4436A-201ENST00000585278 85 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 AL356055.1-201ENST00000602528 446 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 MIR3666-201ENST00000607845 111 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 MIR4788-201ENST00000639104 80 ntBASIC-0.35□□□□□ -2.47
LMX1AQ8TE12 MIR101-2-201ENST00000362195 79 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 RNU6-474P-201ENST00000384243 107 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 MIR516B1-201ENST00000385211 90 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 SNORA75.1-201ENST00000391130 148 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 SNORD110-201ENST00000408189 75 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 RNA5SP25-201ENST00000410815 110 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 SNORA25.13-201ENST00000516395 103 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 RNU6-570P-201ENST00000517051 105 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 RNU7-188P-201ENST00000517063 64 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 AC113195.1-201ENST00000579952 141 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 MIR4473-201ENST00000583731 91 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.36□□□□□ -2.47
LMX1AQ8TE12 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 SNORD114-10-201ENST00000363409 72 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 SNORD114-28-201ENST00000363610 72 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 RNU6-449P-201ENST00000383914 107 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 RNU6-480P-201ENST00000384332 107 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 RNU6-429P-201ENST00000384582 108 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 SNORA79-201ENST00000408376 140 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 AC006210.1-201ENST00000424882 111 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 SNORD116-25-201ENST00000516517 92 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 MIR548H5-201ENST00000580314 60 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 MIR4432-201ENST00000581823 84 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 AC098479.1-201ENST00000609225 154 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 AL365265.1-201ENST00000621045 234 ntBASIC-0.37□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms