Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 MT-TR-201ENST00000387439 65 ntBASIC1.08□□□□□ -2.24
PRPF38AQ8NAV1 SNORA40-201ENST00000388090 126 ntBASIC1.08□□□□□ -2.24
PRPF38AQ8NAV1 RNU7-79P-201ENST00000516082 62 ntBASIC1.08□□□□□ -2.24
PRPF38AQ8NAV1 MIR4698-201ENST00000577795 80 ntBASIC1.08□□□□□ -2.24
PRPF38AQ8NAV1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.08□□□□□ -2.24
PRPF38AQ8NAV1 Y_RNA.506-201ENST00000384494 102 ntBASIC1.07□□□□□ -2.24
PRPF38AQ8NAV1 PSMC1P5-201ENST00000512850 177 ntBASIC1.07□□□□□ -2.24
PRPF38AQ8NAV1 Y_RNA.568-201ENST00000384742 113 ntBASIC1.06□□□□□ -2.24
PRPF38AQ8NAV1 MIR520H-201ENST00000385126 88 ntBASIC1.06□□□□□ -2.24
PRPF38AQ8NAV1 SNORD77B-201ENST00000391112 67 ntBASIC1.06□□□□□ -2.24
PRPF38AQ8NAV1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.06□□□□□ -2.24
PRPF38AQ8NAV1 RNU4-69P-201ENST00000410677 143 ntBASIC1.06□□□□□ -2.24
PRPF38AQ8NAV1 RNU7-56P-201ENST00000458744 62 ntBASIC1.06□□□□□ -2.24
PRPF38AQ8NAV1 RNU7-156P-201ENST00000517214 74 ntBASIC1.06□□□□□ -2.24
PRPF38AQ8NAV1 AC108081.1-201ENST00000604358 221 ntBASIC1.06□□□□□ -2.24
PRPF38AQ8NAV1 RNY1P13-201ENST00000365030 105 ntBASIC1.05□□□□□ -2.24
PRPF38AQ8NAV1 RNU4-83P-201ENST00000410863 133 ntBASIC1.05□□□□□ -2.24
PRPF38AQ8NAV1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
PRPF38AQ8NAV1 RNY4P20-201ENST00000516678 93 ntBASIC1.05□□□□□ -2.24
PRPF38AQ8NAV1 MIR548AE2-201ENST00000583456 67 ntBASIC1.05□□□□□ -2.24
PRPF38AQ8NAV1 SNORD92-201ENST00000585078 85 ntBASIC1.05□□□□□ -2.24
PRPF38AQ8NAV1 SNORA32-201ENST00000384072 121 ntBASIC1.04□□□□□ -2.24
PRPF38AQ8NAV1 MIR759-201ENST00000390224 91 ntBASIC1.04□□□□□ -2.24
PRPF38AQ8NAV1 RNA5SP136-201ENST00000410906 107 ntBASIC1.04□□□□□ -2.24
PRPF38AQ8NAV1 AL158147.1-201ENST00000443970 75 ntBASIC1.04□□□□□ -2.24
PRPF38AQ8NAV1 Y_RNA.703-201ENST00000516846 111 ntBASIC1.04□□□□□ -2.24
PRPF38AQ8NAV1 MIR6515-201ENST00000619843 57 ntBASIC1.04□□□□□ -2.24
PRPF38AQ8NAV1 MIR539-201ENST00000365690 78 ntBASIC1.03□□□□□ -2.24
PRPF38AQ8NAV1 U8.15-201ENST00000390947 134 ntBASIC1.03□□□□□ -2.24
PRPF38AQ8NAV1 RN7SKP19-201ENST00000516016 252 ntBASIC1.03□□□□□ -2.24
PRPF38AQ8NAV1 RNU6-110P-201ENST00000384508 104 ntBASIC1.02□□□□□ -2.25
PRPF38AQ8NAV1 AC244098.3-201ENST00000424803 96 ntBASIC1.02□□□□□ -2.25
PRPF38AQ8NAV1 RNU6-346P-201ENST00000516288 111 ntBASIC1.02□□□□□ -2.25
PRPF38AQ8NAV1 CYP3A137P-201ENST00000562436 69 ntBASIC1.02□□□□□ -2.25
PRPF38AQ8NAV1 HSBP1P2-201ENST00000299671 229 ntBASIC1.01□□□□□ -2.25
PRPF38AQ8NAV1 RNU4-45P-201ENST00000365469 141 ntBASIC1.01□□□□□ -2.25
PRPF38AQ8NAV1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PRPF38AQ8NAV1 RNU6-746P-201ENST00000384112 109 ntBASIC1.01□□□□□ -2.25
PRPF38AQ8NAV1 MIR573-201ENST00000384964 99 ntBASIC1.01□□□□□ -2.25
PRPF38AQ8NAV1 MTND4LP9-201ENST00000427694 174 ntBASIC1.01□□□□□ -2.25
PRPF38AQ8NAV1 RNU7-102P-201ENST00000458948 62 ntBASIC1.01□□□□□ -2.25
PRPF38AQ8NAV1 AC011195.1-201ENST00000578177 177 ntBASIC1.01□□□□□ -2.25
PRPF38AQ8NAV1 SNORD114-10-201ENST00000363409 72 ntBASIC1□□□□□ -2.25
PRPF38AQ8NAV1 Y_RNA.213-201ENST00000364178 111 ntBASIC1□□□□□ -2.25
PRPF38AQ8NAV1 Y_RNA.280-201ENST00000364765 112 ntBASIC1□□□□□ -2.25
PRPF38AQ8NAV1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1□□□□□ -2.25
PRPF38AQ8NAV1 MIR4653-201ENST00000585107 83 ntBASIC1□□□□□ -2.25
PRPF38AQ8NAV1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1□□□□□ -2.25
PRPF38AQ8NAV1 RNU6-403P-201ENST00000363163 104 ntBASIC0.99□□□□□ -2.25
PRPF38AQ8NAV1 SNORD50.2-201ENST00000365465 70 ntBASIC0.99□□□□□ -2.25
PRPF38AQ8NAV1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
PRPF38AQ8NAV1 RNA5SP272-201ENST00000516095 111 ntBASIC0.99□□□□□ -2.25
PRPF38AQ8NAV1 RNU6-765P-201ENST00000516916 99 ntBASIC0.99□□□□□ -2.25
PRPF38AQ8NAV1 AC090897.1-201ENST00000580909 226 ntBASIC0.99□□□□□ -2.25
PRPF38AQ8NAV1 FAM71BP1-201ENST00000604431 523 ntBASIC0.99□□□□□ -2.25
PRPF38AQ8NAV1 RNU6-257P-201ENST00000410238 98 ntBASIC0.98□□□□□ -2.25
PRPF38AQ8NAV1 AP003327.1-201ENST00000529684 127 ntBASIC0.98□□□□□ -2.25
PRPF38AQ8NAV1 AC133485.1-201ENST00000567176 124 ntBASIC0.98□□□□□ -2.25
PRPF38AQ8NAV1 MIR146A-201ENST00000385201 99 ntBASIC0.97□□□□□ -2.25
PRPF38AQ8NAV1 MIR613-201ENST00000385248 95 ntBASIC0.97□□□□□ -2.25
PRPF38AQ8NAV1 COX6CP6-201ENST00000490840 228 ntBASIC0.97□□□□□ -2.25
PRPF38AQ8NAV1 MIR5000-201ENST00000577717 103 ntBASIC0.97□□□□□ -2.25
PRPF38AQ8NAV1 MIR4491-201ENST00000581087 68 ntBASIC0.97□□□□□ -2.25
PRPF38AQ8NAV1 MIR3163-201ENST00000581592 73 ntBASIC0.97□□□□□ -2.25
PRPF38AQ8NAV1 MIR6082-201ENST00000613604 109 ntBASIC0.97□□□□□ -2.25
PRPF38AQ8NAV1 AL589743.1-201ENST00000551932 2712 ntBASIC0.97□□□□□ -2.25
PRPF38AQ8NAV1 Y_RNA.198-201ENST00000364013 98 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 Y_RNA.294-201ENST00000364916 102 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 SNORA72.6-201ENST00000384520 129 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 AC004941.2-201ENST00000427009 228 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 RNU7-137P-201ENST00000516788 62 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 RNU6-448P-201ENST00000517052 107 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 MIR3133-201ENST00000583157 78 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 MIR8066-201ENST00000617280 78 ntBASIC0.96□□□□□ -2.26
PRPF38AQ8NAV1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.95□□□□□ -2.26
PRPF38AQ8NAV1 MIR1263-201ENST00000408324 86 ntBASIC0.95□□□□□ -2.26
PRPF38AQ8NAV1 SNORD67.1-201ENST00000516618 108 ntBASIC0.95□□□□□ -2.26
PRPF38AQ8NAV1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
PRPF38AQ8NAV1 SNORD100-201ENST00000408573 76 ntBASIC0.94□□□□□ -2.26
PRPF38AQ8NAV1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.94□□□□□ -2.26
PRPF38AQ8NAV1 IGKV1-22-201ENST00000524313 326 ntBASIC0.94□□□□□ -2.26
PRPF38AQ8NAV1 AC022523.2-201ENST00000561045 150 ntBASIC0.94□□□□□ -2.26
PRPF38AQ8NAV1 AC008608.1-201ENST00000603910 127 ntBASIC0.94□□□□□ -2.26
PRPF38AQ8NAV1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.93□□□□□ -2.26
PRPF38AQ8NAV1 RNA5SP117-201ENST00000365294 118 ntBASIC0.93□□□□□ -2.26
PRPF38AQ8NAV1 MIR548M-201ENST00000408260 86 ntBASIC0.93□□□□□ -2.26
PRPF38AQ8NAV1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.93□□□□□ -2.26
PRPF38AQ8NAV1 RNA5SP222-201ENST00000411039 105 ntBASIC0.93□□□□□ -2.26
PRPF38AQ8NAV1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.93□□□□□ -2.26
PRPF38AQ8NAV1 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
PRPF38AQ8NAV1 DEFB131E-201ENST00000532329 154 ntBASIC0.93□□□□□ -2.26
PRPF38AQ8NAV1 MIR3612-201ENST00000579753 87 ntBASIC0.93□□□□□ -2.26
PRPF38AQ8NAV1 RNU4-58P-201ENST00000363192 141 ntBASIC0.92□□□□□ -2.26
PRPF38AQ8NAV1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.92□□□□□ -2.26
PRPF38AQ8NAV1 Y_RNA.586-201ENST00000391146 98 ntBASIC0.92□□□□□ -2.26
PRPF38AQ8NAV1 AC096949.1-201ENST00000412047 152 ntBASIC0.92□□□□□ -2.26
PRPF38AQ8NAV1 RNU6-1211P-201ENST00000459179 105 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms