Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.65□□□□□ -2.31
RTL3Q8N8U3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNY1P13-201ENST00000365030 105 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 MIR125B2-201ENST00000385128 89 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNA5SP237-201ENST00000410414 113 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 MTND4LP9-201ENST00000427694 174 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 MIR1270-201ENST00000459320 83 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 AL137067.1-201ENST00000615933 120 ntBASIC0.64□□□□□ -2.31
RTL3Q8N8U3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.64□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.114-201ENST00000363265 113 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNU6-647P-201ENST00000364243 107 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 SNORD50.2-201ENST00000365465 70 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
RTL3Q8N8U3 U8.15-201ENST00000390947 134 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.617-201ENST00000410920 90 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 AC015818.7-201ENST00000428754 109 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 AC087499.7-201ENST00000441958 109 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNU6-346P-201ENST00000516288 111 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNY4P20-201ENST00000516678 93 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 RNA5SP480-201ENST00000516840 109 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 SNORD92-201ENST00000585078 85 ntBASIC0.63□□□□□ -2.31
RTL3Q8N8U3 SNORD114-26-201ENST00000363543 72 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.343-201ENST00000365354 112 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU6-746P-201ENST00000384112 109 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU6-257P-201ENST00000410238 98 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 AL158147.1-201ENST00000443970 75 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU7-79P-201ENST00000516082 62 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNA5SP272-201ENST00000516095 111 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNU6-977P-201ENST00000516411 103 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 RNA5SP33-201ENST00000516687 98 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.703-201ENST00000516846 111 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 MIR548AE2-201ENST00000583456 67 ntBASIC0.62□□□□□ -2.31
RTL3Q8N8U3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RTL3Q8N8U3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.294-201ENST00000364916 102 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.299-201ENST00000364973 94 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIR7-2-201ENST00000384970 110 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIRLET7F2-201ENST00000385277 83 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.588-201ENST00000391254 102 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIR938-201ENST00000401216 83 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIR1257-201ENST00000408490 117 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 AC244098.3-201ENST00000424803 96 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 RN7SKP19-201ENST00000516016 252 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 MIR8066-201ENST00000617280 78 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 TUG1_4.1-201ENST00000619464 181 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.61□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 RNU6-1104P-201ENST00000384723 104 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 MIR520F-201ENST00000384824 87 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 SNORA40-201ENST00000388090 126 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 Y_RNA.586-201ENST00000391146 98 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 RNU4-69P-201ENST00000410677 143 ntBASIC0.6□□□□□ -2.31
RTL3Q8N8U3 MIR573-201ENST00000384964 99 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 RNA5SP136-201ENST00000410906 107 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 RNU7-137P-201ENST00000516788 62 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AC022523.2-201ENST00000561045 150 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AC090897.1-201ENST00000580909 226 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 MIR3133-201ENST00000583157 78 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AL359881.1-201ENST00000602916 267 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 AC008608.1-201ENST00000603910 127 ntBASIC0.59□□□□□ -2.31
RTL3Q8N8U3 MIR520H-201ENST00000385126 88 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
RTL3Q8N8U3 SNORD100-201ENST00000408573 76 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 SNORD93-201ENST00000408813 74 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 RNU7-102P-201ENST00000458948 62 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 RNU6-765P-201ENST00000516916 99 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 RNU7-156P-201ENST00000517214 74 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 MIR4491-201ENST00000581087 68 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.58□□□□□ -2.32
RTL3Q8N8U3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
RTL3Q8N8U3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RTL3Q8N8U3 SNORD114-10-201ENST00000363409 72 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 RNU6-704P-201ENST00000364162 103 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 SNORA32-201ENST00000384072 121 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 MT-TI-201ENST00000387365 69 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 RNU4-83P-201ENST00000410863 133 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 RNU5E-3P-201ENST00000515913 68 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
RTL3Q8N8U3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.57□□□□□ -2.32
RTL3Q8N8U3 SNORD115-19-201ENST00000363098 82 ntBASIC0.56□□□□□ -2.32
RTL3Q8N8U3 SNORD115-18-201ENST00000363293 82 ntBASIC0.56□□□□□ -2.32
RTL3Q8N8U3 Y_RNA.198-201ENST00000364013 98 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms