Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AP000942.3-201ENST00000603702 160 ntBASIC2.16□□□□□ -2.06
NPAS4Q8IUM7 AL096861.1-201ENST00000610899 123 ntBASIC2.16□□□□□ -2.06
NPAS4Q8IUM7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
NPAS4Q8IUM7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 Y_RNA.567-201ENST00000384736 106 ntBASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 MIR548G-201ENST00000408442 89 ntBASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 RNU1-98P-201ENST00000458992 160 ntBASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 AL512310.8-201ENST00000550183 120 ntBASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 RNU6-90P-201ENST00000606352 106 ntBASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 MIR548BB-201ENST00000626714 66 ntBASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NPAS4Q8IUM7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 Y_RNA.221-201ENST00000364248 96 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 Y_RNA.426-201ENST00000384068 113 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 SNORA40.18-201ENST00000391200 128 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 SPINT5P-201ENST00000448174 155 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 AC009474.2-201ENST00000451383 136 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 AC090255.1-201ENST00000495779 349 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 AL133373.1-201ENST00000497098 94 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 RNA5SP402-201ENST00000517148 110 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 AC020891.4-201ENST00000605745 93 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 AC006160.2-201ENST00000637708 154 ntBASIC2.14□□□□□ -2.07
NPAS4Q8IUM7 SNORD114-10-201ENST00000363409 72 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 RNU6-509P-201ENST00000363519 107 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 RNU6-1244P-201ENST00000363614 108 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 SNORD38B-201ENST00000384690 67 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 RNU6-279P-201ENST00000391297 101 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 RN7SKP88-201ENST00000516847 250 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 RNU6-902P-201ENST00000517212 91 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 7SK.8-201ENST00000612110 250 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 7SK.11-201ENST00000615477 250 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 7SK.13-201ENST00000622040 250 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 SNORD38B-202ENST00000625943 69 ntBASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NPAS4Q8IUM7 RNY1P13-201ENST00000365030 105 ntBASIC2.12□□□□□ -2.07
NPAS4Q8IUM7 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
NPAS4Q8IUM7 RNU7-48P-201ENST00000458875 63 ntBASIC2.12□□□□□ -2.07
NPAS4Q8IUM7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.12□□□□□ -2.07
NPAS4Q8IUM7 RNU6-857P-201ENST00000515893 110 ntBASIC2.12□□□□□ -2.07
NPAS4Q8IUM7 MIR3192-201ENST00000584920 77 ntBASIC2.12□□□□□ -2.07
NPAS4Q8IUM7 AL137847.3-201ENST00000611521 109 ntBASIC2.12□□□□□ -2.07
NPAS4Q8IUM7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.12□□□□□ -2.07
NPAS4Q8IUM7 RNU6-652P-201ENST00000365488 107 ntBASIC2.11□□□□□ -2.07
NPAS4Q8IUM7 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
NPAS4Q8IUM7 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
NPAS4Q8IUM7 AC012676.2-201ENST00000619258 186 ntBASIC2.11□□□□□ -2.07
NPAS4Q8IUM7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.11□□□□□ -2.07
NPAS4Q8IUM7 RNU6-633P-201ENST00000362612 103 ntBASIC2.1□□□□□ -2.07
NPAS4Q8IUM7 Y_RNA.98-201ENST00000363109 102 ntBASIC2.1□□□□□ -2.07
NPAS4Q8IUM7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.1□□□□□ -2.07
NPAS4Q8IUM7 RNU6-396P-201ENST00000365369 105 ntBASIC2.1□□□□□ -2.07
NPAS4Q8IUM7 RNU6-613P-201ENST00000410412 108 ntBASIC2.1□□□□□ -2.07
NPAS4Q8IUM7 RPS27P16-201ENST00000425758 201 ntBASIC2.1□□□□□ -2.07
NPAS4Q8IUM7 RNU11-2P-201ENST00000516898 142 ntBASIC2.1□□□□□ -2.07
NPAS4Q8IUM7 MTND5P40-201ENST00000559945 246 ntBASIC2.1□□□□□ -2.07
NPAS4Q8IUM7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.1□□□□□ -2.07
NPAS4Q8IUM7 AL161722.3-201ENST00000605789 2983 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 MIR103A2-201ENST00000362154 78 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 Y_RNA.173-201ENST00000363776 113 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 SNORD115-27-201ENST00000364430 82 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 MIR181B2-201ENST00000385004 89 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-447P-201ENST00000410293 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-1118P-201ENST00000410382 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-1076P-201ENST00000410397 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-355P-201ENST00000410427 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-791P-201ENST00000410467 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-705P-201ENST00000410601 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-1100P-201ENST00000410691 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-860P-201ENST00000410860 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-1217P-201ENST00000411276 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 RNU6-785P-201ENST00000411324 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 MIR2115-201ENST00000516657 100 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 AL513043.2-201ENST00000573941 143 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 MIR4285-201ENST00000581001 85 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 U6.90-201ENST00000614007 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 U6.70-201ENST00000620287 104 ntBASIC2.09□□□□□ -2.07
NPAS4Q8IUM7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.08□□□□□ -2.08
NPAS4Q8IUM7 AC141846.1-201ENST00000568348 142 ntBASIC2.08□□□□□ -2.08
NPAS4Q8IUM7 AP000753.3-201ENST00000604083 169 ntBASIC2.08□□□□□ -2.08
NPAS4Q8IUM7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NPAS4Q8IUM7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
NPAS4Q8IUM7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
NPAS4Q8IUM7 SNORD38.2-201ENST00000384470 69 ntBASIC2.07□□□□□ -2.08
NPAS4Q8IUM7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.07□□□□□ -2.08
NPAS4Q8IUM7 RNA5SP237-201ENST00000410414 113 ntBASIC2.07□□□□□ -2.08
NPAS4Q8IUM7 AC244023.1-201ENST00000426884 112 ntBASIC2.07□□□□□ -2.08
NPAS4Q8IUM7 AC242498.1-201ENST00000604134 111 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms