Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 MIR18B-201ENST00000454574 71 ntBASIC2.51□□□□□ -2.01
RETREG3Q86VR2 EIF4BP1-201ENST00000554881 351 ntBASIC2.51□□□□□ -2.01
RETREG3Q86VR2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.5□□□□□ -2.01
RETREG3Q86VR2 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
RETREG3Q86VR2 MIR101-2-201ENST00000362195 79 ntBASIC2.5□□□□□ -2.01
RETREG3Q86VR2 RNU6-208P-201ENST00000362431 107 ntBASIC2.5□□□□□ -2.01
RETREG3Q86VR2 RNA5SP264-201ENST00000363115 107 ntBASIC2.5□□□□□ -2.01
RETREG3Q86VR2 RNU1-36P-201ENST00000365130 165 ntBASIC2.5□□□□□ -2.01
RETREG3Q86VR2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.5□□□□□ -2.01
RETREG3Q86VR2 AP003716.2-201ENST00000528260 108 ntBASIC2.5□□□□□ -2.01
RETREG3Q86VR2 AC079600.2-201ENST00000550076 130 ntBASIC2.5□□□□□ -2.01
RETREG3Q86VR2 MIR1297-201ENST00000637311 77 ntBASIC2.5□□□□□ -2.01
RETREG3Q86VR2 Y_RNA.532-201ENST00000384590 113 ntBASIC2.49□□□□□ -2.01
RETREG3Q86VR2 RNU6-1194P-201ENST00000516208 104 ntBASIC2.49□□□□□ -2.01
RETREG3Q86VR2 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
RETREG3Q86VR2 Y_RNA.681-201ENST00000516445 113 ntBASIC2.49□□□□□ -2.01
RETREG3Q86VR2 RNU6-448P-201ENST00000517052 107 ntBASIC2.49□□□□□ -2.01
RETREG3Q86VR2 MIR8074-201ENST00000615081 81 ntBASIC2.49□□□□□ -2.01
RETREG3Q86VR2 MIR8063-201ENST00000621930 81 ntBASIC2.49□□□□□ -2.01
RETREG3Q86VR2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RETREG3Q86VR2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RETREG3Q86VR2 SNORA5B-201ENST00000363786 132 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 MIR518E-201ENST00000385252 88 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 SNORD100-201ENST00000408573 76 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 RNA5SP21-201ENST00000410917 96 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 AC244636.1-201ENST00000421152 228 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 RNU6-70P-201ENST00000516438 60 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 RNU6-539P-201ENST00000516665 103 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 RNU6-1015P-201ENST00000517121 99 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 RNA5SP402-201ENST00000517148 110 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 SNRPGP19-201ENST00000603826 189 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 AL773524.1-201ENST00000614065 229 ntBASIC2.48□□□□□ -2.01
RETREG3Q86VR2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
RETREG3Q86VR2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.47□□□□□ -2.01
RETREG3Q86VR2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RETREG3Q86VR2 SNORA80A-201ENST00000363922 136 ntBASIC2.47□□□□□ -2.01
RETREG3Q86VR2 RNA5SP181-201ENST00000410246 98 ntBASIC2.47□□□□□ -2.01
RETREG3Q86VR2 RNU7-10P-201ENST00000607194 63 ntBASIC2.47□□□□□ -2.01
RETREG3Q86VR2 AL137847.3-201ENST00000611521 109 ntBASIC2.47□□□□□ -2.01
RETREG3Q86VR2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.47□□□□□ -2.01
RETREG3Q86VR2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
RETREG3Q86VR2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
RETREG3Q86VR2 RNU6-580P-201ENST00000365159 107 ntBASIC2.46□□□□□ -2.02
RETREG3Q86VR2 Y_RNA.536-201ENST00000384621 113 ntBASIC2.46□□□□□ -2.02
RETREG3Q86VR2 RNU7-195P-201ENST00000458793 62 ntBASIC2.46□□□□□ -2.02
RETREG3Q86VR2 SNORA31.11-201ENST00000516528 139 ntBASIC2.46□□□□□ -2.02
RETREG3Q86VR2 MIR548H5-201ENST00000580314 60 ntBASIC2.46□□□□□ -2.02
RETREG3Q86VR2 U4.3-201ENST00000621047 82 ntBASIC2.46□□□□□ -2.02
RETREG3Q86VR2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.46□□□□□ -2.02
RETREG3Q86VR2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.45□□□□□ -2.02
RETREG3Q86VR2 MIR520H-201ENST00000385126 88 ntBASIC2.45□□□□□ -2.02
RETREG3Q86VR2 U8.13-201ENST00000390842 128 ntBASIC2.45□□□□□ -2.02
RETREG3Q86VR2 TRAJ51-201ENST00000504127 63 ntBASIC2.45□□□□□ -2.02
RETREG3Q86VR2 RNU6-303P-201ENST00000517091 106 ntBASIC2.45□□□□□ -2.02
RETREG3Q86VR2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.45□□□□□ -2.02
RETREG3Q86VR2 MIR4287-201ENST00000579398 78 ntBASIC2.45□□□□□ -2.02
RETREG3Q86VR2 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
RETREG3Q86VR2 AC013244.2-201ENST00000603396 103 ntBASIC2.45□□□□□ -2.02
RETREG3Q86VR2 AC023934.1-201ENST00000574529 2389 ntBASIC2.45□□□□□ -2.02
RETREG3Q86VR2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
RETREG3Q86VR2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
RETREG3Q86VR2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RETREG3Q86VR2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RETREG3Q86VR2 SNORD90-201ENST00000391145 111 ntBASIC2.44□□□□□ -2.02
RETREG3Q86VR2 MIR4513-201ENST00000581077 86 ntBASIC2.44□□□□□ -2.02
RETREG3Q86VR2 MIR4713-201ENST00000582691 75 ntBASIC2.44□□□□□ -2.02
RETREG3Q86VR2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RETREG3Q86VR2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.43□□□□□ -2.02
RETREG3Q86VR2 MIR1257-201ENST00000408490 117 ntBASIC2.43□□□□□ -2.02
RETREG3Q86VR2 AC087499.2-201ENST00000432861 149 ntBASIC2.43□□□□□ -2.02
RETREG3Q86VR2 RNA5SP82-201ENST00000516707 92 ntBASIC2.43□□□□□ -2.02
RETREG3Q86VR2 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.43□□□□□ -2.02
RETREG3Q86VR2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RETREG3Q86VR2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
RETREG3Q86VR2 Y_RNA.12-201ENST00000362393 112 ntBASIC2.42□□□□□ -2.02
RETREG3Q86VR2 SNORA16B-201ENST00000364674 135 ntBASIC2.42□□□□□ -2.02
RETREG3Q86VR2 Y_RNA.510-201ENST00000384511 114 ntBASIC2.42□□□□□ -2.02
RETREG3Q86VR2 RNU7-185P-201ENST00000459215 60 ntBASIC2.42□□□□□ -2.02
RETREG3Q86VR2 Y_RNA.809-201ENST00000516058 95 ntBASIC2.42□□□□□ -2.02
RETREG3Q86VR2 TRDV1-202ENST00000621643 102 ntBASIC2.42□□□□□ -2.02
RETREG3Q86VR2 ZNF658B-202ENST00000615961 3375 ntBASIC2.42□□□□□ -2.02
RETREG3Q86VR2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.41□□□□□ -2.02
RETREG3Q86VR2 RNU5F-1-201ENST00000362507 117 ntBASIC2.41□□□□□ -2.02
RETREG3Q86VR2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RETREG3Q86VR2 MIR6852-201ENST00000621699 66 ntBASIC2.41□□□□□ -2.02
RETREG3Q86VR2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RETREG3Q86VR2 AL359851.1-201ENST00000569460 4997 ntBASIC2.41□□□□□ -2.02
RETREG3Q86VR2 Y_RNA.13-201ENST00000362403 112 ntBASIC2.4□□□□□ -2.03
RETREG3Q86VR2 Y_RNA.239-201ENST00000364444 113 ntBASIC2.4□□□□□ -2.03
RETREG3Q86VR2 MIR519A1-201ENST00000385257 85 ntBASIC2.4□□□□□ -2.03
RETREG3Q86VR2 AC019176.1-201ENST00000518519 225 ntBASIC2.4□□□□□ -2.03
RETREG3Q86VR2 MIR6082-201ENST00000613604 109 ntBASIC2.4□□□□□ -2.03
RETREG3Q86VR2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RETREG3Q86VR2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.03
RETREG3Q86VR2 Y_RNA.56-201ENST00000362798 112 ntBASIC2.39□□□□□ -2.03
RETREG3Q86VR2 SNORA67.3-201ENST00000384366 140 ntBASIC2.39□□□□□ -2.03
RETREG3Q86VR2 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
RETREG3Q86VR2 RNU6-687P-201ENST00000516443 89 ntBASIC2.39□□□□□ -2.03
RETREG3Q86VR2 YWHAEP2-201ENST00000580066 112 ntBASIC2.39□□□□□ -2.03
RETREG3Q86VR2 YWHAEP3-201ENST00000582767 121 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms