Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 Y_RNA.531-201ENST00000384589 121 ntBASIC0.46□□□□□ -2.34
NUP54Q7Z3B4 AL512326.2-201ENST00000426359 151 ntBASIC0.46□□□□□ -2.34
NUP54Q7Z3B4 RNU6-240P-201ENST00000516098 97 ntBASIC0.46□□□□□ -2.34
NUP54Q7Z3B4 Y_RNA.251-201ENST00000364551 99 ntBASIC0.45□□□□□ -2.34
NUP54Q7Z3B4 AL603914.1-201ENST00000401964 204 ntBASIC0.45□□□□□ -2.34
NUP54Q7Z3B4 snoU13.18-201ENST00000459483 104 ntBASIC0.45□□□□□ -2.34
NUP54Q7Z3B4 RNU2-35P-201ENST00000516446 142 ntBASIC0.45□□□□□ -2.34
NUP54Q7Z3B4 AC112693.2-201ENST00000556538 232 ntBASIC0.45□□□□□ -2.34
NUP54Q7Z3B4 MIR3678-201ENST00000578455 94 ntBASIC0.45□□□□□ -2.34
NUP54Q7Z3B4 AC021443.1-201ENST00000604478 211 ntBASIC0.45□□□□□ -2.34
NUP54Q7Z3B4 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
NUP54Q7Z3B4 RNY1P11-201ENST00000363759 113 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 Y_RNA.508-201ENST00000384502 114 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 SNORA72.6-201ENST00000384520 129 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 RNU6-679P-201ENST00000391003 106 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 RNA5SP94-201ENST00000516917 108 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 RNU6-182P-201ENST00000516970 105 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 uc_338.16-201ENST00000621804 95 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 AL589743.1-201ENST00000551932 2712 ntBASIC0.44□□□□□ -2.34
NUP54Q7Z3B4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 RNU7-164P-201ENST00000459221 62 ntBASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 Y_RNA.651-201ENST00000459380 103 ntBASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 RNU6-1194P-201ENST00000516208 104 ntBASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 Y_RNA.690-201ENST00000516603 95 ntBASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 MIR548AE2-201ENST00000583456 67 ntBASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 MIR6515-201ENST00000619843 57 ntBASIC0.43□□□□□ -2.34
NUP54Q7Z3B4 RNU4-11P-201ENST00000365287 132 ntBASIC0.42□□□□□ -2.34
NUP54Q7Z3B4 SNORA32-201ENST00000384072 121 ntBASIC0.42□□□□□ -2.34
NUP54Q7Z3B4 Y_RNA.580-201ENST00000391004 95 ntBASIC0.42□□□□□ -2.34
NUP54Q7Z3B4 MIR936-201ENST00000401264 98 ntBASIC0.42□□□□□ -2.34
NUP54Q7Z3B4 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
NUP54Q7Z3B4 AC074198.2-201ENST00000508153 258 ntBASIC0.42□□□□□ -2.34
NUP54Q7Z3B4 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
NUP54Q7Z3B4 RNU6-469P-201ENST00000516253 101 ntBASIC0.42□□□□□ -2.34
NUP54Q7Z3B4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.42□□□□□ -2.34
NUP54Q7Z3B4 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 RNU6-309P-201ENST00000364573 106 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 RNA5SP517-201ENST00000364724 117 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 Y_RNA.299-201ENST00000364973 94 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 RNU7-123P-201ENST00000515911 60 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 Y_RNA.686-201ENST00000516548 134 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 SNORA25.16-201ENST00000516741 121 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 RNU6-135P-201ENST00000516769 101 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 RNU7-137P-201ENST00000516788 62 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
NUP54Q7Z3B4 SNORD114-10-201ENST00000363409 72 ntBASIC0.4□□□□□ -2.35
NUP54Q7Z3B4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.4□□□□□ -2.35
NUP54Q7Z3B4 RNU6-449P-201ENST00000383914 107 ntBASIC0.4□□□□□ -2.35
NUP54Q7Z3B4 Y_RNA.536-201ENST00000384621 113 ntBASIC0.4□□□□□ -2.35
NUP54Q7Z3B4 SNORA40.8-201ENST00000411034 126 ntBASIC0.4□□□□□ -2.35
NUP54Q7Z3B4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
NUP54Q7Z3B4 RNA5SP436-201ENST00000516020 115 ntBASIC0.4□□□□□ -2.35
NUP54Q7Z3B4 SNORA25.12-201ENST00000516202 82 ntBASIC0.4□□□□□ -2.35
NUP54Q7Z3B4 Y_RNA.778-201ENST00000620203 90 ntBASIC0.4□□□□□ -2.35
NUP54Q7Z3B4 RNU4-58P-201ENST00000363192 141 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 RNU6-508P-201ENST00000363231 103 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 RNU6-291P-201ENST00000384720 107 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 MIR518A1-201ENST00000385068 85 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 RNU4-69P-201ENST00000410677 143 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 RNU6-394P-201ENST00000410735 107 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 SNORD71-201ENST00000411292 86 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 RNU7-197P-201ENST00000458836 62 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 SNORD67.1-201ENST00000516618 108 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 Y_RNA.697-201ENST00000516776 113 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
NUP54Q7Z3B4 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 RNA5SP133-201ENST00000363368 119 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 RNU6-151P-201ENST00000364158 107 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 Y_RNA.366-201ENST00000365540 102 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 SNORA8.2-201ENST00000384372 139 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 RNU6-535P-201ENST00000384722 107 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 MIR644A-201ENST00000385262 94 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 SNORA31.14-201ENST00000516728 116 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 DEFB131E-201ENST00000532329 154 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 AC098479.1-201ENST00000609225 154 ntBASIC0.38□□□□□ -2.35
NUP54Q7Z3B4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.37□□□□□ -2.35
NUP54Q7Z3B4 MIR598-201ENST00000384868 97 ntBASIC0.37□□□□□ -2.35
NUP54Q7Z3B4 RNU6-531P-201ENST00000516694 104 ntBASIC0.37□□□□□ -2.35
NUP54Q7Z3B4 AC138749.4-201ENST00000563970 127 ntBASIC0.37□□□□□ -2.35
NUP54Q7Z3B4 MTND5P34-201ENST00000568888 325 ntBASIC0.37□□□□□ -2.35
NUP54Q7Z3B4 AL359881.1-201ENST00000602916 267 ntBASIC0.37□□□□□ -2.35
NUP54Q7Z3B4 AL137067.1-201ENST00000615933 120 ntBASIC0.37□□□□□ -2.35
NUP54Q7Z3B4 U6.109-201ENST00000636749 87 ntBASIC0.37□□□□□ -2.35
NUP54Q7Z3B4 SNORD118-201ENST00000363593 134 ntBASIC0.36□□□□□ -2.35
NUP54Q7Z3B4 RNU6-1130P-201ENST00000365434 107 ntBASIC0.36□□□□□ -2.35
NUP54Q7Z3B4 SNORD116-18-201ENST00000383961 92 ntBASIC0.36□□□□□ -2.35
NUP54Q7Z3B4 MIR216A-201ENST00000385063 110 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms