Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 Y_RNA.818-201ENST00000618813 71 ntBASIC1.77□□□□□ -2.13
RUFY4Q6ZNE9 MIR450A1-201ENST00000362262 91 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 RNY3P2-201ENST00000362918 102 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-60P-201ENST00000364792 103 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 Y_RNA.360-201ENST00000365512 102 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 Y_RNA.377-201ENST00000365644 108 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-1237P-201ENST00000384777 107 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 MIR1323-201ENST00000408090 73 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 RNU7-62P-201ENST00000458856 62 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 RNU7-137P-201ENST00000516788 62 ntBASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-1313P-201ENST00000362622 102 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-1099P-201ENST00000363533 107 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 Y_RNA.495-201ENST00000384435 112 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 MIR206-201ENST00000384872 86 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-1165P-201ENST00000410119 107 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 snoU13.18-201ENST00000459483 104 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 AC048334.1-201ENST00000477975 159 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-904P-201ENST00000516206 101 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 SNORD67.1-201ENST00000516618 108 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 DEFB131E-201ENST00000532329 154 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 MIR6740-201ENST00000618268 113 ntBASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RUFY4Q6ZNE9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 Y_RNA.224-201ENST00000364308 111 ntBASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-679P-201ENST00000391003 106 ntBASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 SNORA7.5-201ENST00000410672 110 ntBASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 MIR18B-201ENST00000454574 71 ntBASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 SNORA31.2-201ENST00000516019 134 ntBASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-168P-201ENST00000516189 101 ntBASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 AC141557.1-201ENST00000540982 400 ntBASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 SNORA4-201ENST00000584302 138 ntBASIC1.74□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-832P-201ENST00000363319 107 ntBASIC1.73□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-205P-201ENST00000390858 107 ntBASIC1.73□□□□□ -2.13
RUFY4Q6ZNE9 SNORA67.6-201ENST00000391093 99 ntBASIC1.73□□□□□ -2.13
RUFY4Q6ZNE9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.73□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-158P-201ENST00000517104 100 ntBASIC1.73□□□□□ -2.13
RUFY4Q6ZNE9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.73□□□□□ -2.13
RUFY4Q6ZNE9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 MIR30D-201ENST00000362283 70 ntBASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 Y_RNA.98-201ENST00000363109 102 ntBASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 SNORA80D-201ENST00000384488 135 ntBASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 MIR605-201ENST00000385078 83 ntBASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 MIR577-201ENST00000385196 96 ntBASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 Y_RNA.601-201ENST00000410500 113 ntBASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 AL353813.1-201ENST00000440700 253 ntBASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 RNU1-92P-201ENST00000517017 135 ntBASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 AL512310.12-203ENST00000640543 90 ntBASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-654P-201ENST00000364373 107 ntBASIC1.71□□□□□ -2.14
RUFY4Q6ZNE9 RNU6-392P-201ENST00000364926 101 ntBASIC1.71□□□□□ -2.14
RUFY4Q6ZNE9 RNU6-1201P-201ENST00000384227 107 ntBASIC1.71□□□□□ -2.14
RUFY4Q6ZNE9 AL591704.2-201ENST00000421658 181 ntBASIC1.71□□□□□ -2.14
RUFY4Q6ZNE9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.71□□□□□ -2.14
RUFY4Q6ZNE9 RNU6-537P-201ENST00000517277 103 ntBASIC1.71□□□□□ -2.14
RUFY4Q6ZNE9 AC096720.1-201ENST00000604441 183 ntBASIC1.71□□□□□ -2.14
RUFY4Q6ZNE9 SNORA7.1-201ENST00000363750 139 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 SNORD113.3-201ENST00000364630 78 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 RNU6-865P-201ENST00000364772 107 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 MIR517C-201ENST00000385103 95 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 RNA5SP89-201ENST00000410300 108 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 MRPL35P3-201ENST00000421557 364 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 RNU7-48P-201ENST00000458875 63 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 AC133485.1-201ENST00000567176 124 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 MIR6504-201ENST00000613520 61 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 AL442128.1-201ENST00000615151 90 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 AC012676.2-201ENST00000619258 186 ntBASIC1.7□□□□□ -2.14
RUFY4Q6ZNE9 Y_RNA.448-201ENST00000384185 108 ntBASIC1.69□□□□□ -2.14
RUFY4Q6ZNE9 MIR590-201ENST00000385008 97 ntBASIC1.69□□□□□ -2.14
RUFY4Q6ZNE9 RNU6-1321P-201ENST00000390905 107 ntBASIC1.69□□□□□ -2.14
RUFY4Q6ZNE9 SNORD12-201ENST00000391002 90 ntBASIC1.69□□□□□ -2.14
RUFY4Q6ZNE9 SCARNA23-201ENST00000516060 130 ntBASIC1.69□□□□□ -2.14
RUFY4Q6ZNE9 Y_RNA.694-201ENST00000516677 117 ntBASIC1.69□□□□□ -2.14
RUFY4Q6ZNE9 AP001318.4-201ENST00000616637 121 ntBASIC1.69□□□□□ -2.14
RUFY4Q6ZNE9 MIR2052-201ENST00000636055 55 ntBASIC1.69□□□□□ -2.14
RUFY4Q6ZNE9 ZNF209P-201ENST00000593450 2304 ntBASIC1.69□□□□□ -2.14
RUFY4Q6ZNE9 Y_RNA.93-201ENST00000363066 109 ntBASIC1.68□□□□□ -2.14
RUFY4Q6ZNE9 RNY1P2-201ENST00000364820 117 ntBASIC1.68□□□□□ -2.14
RUFY4Q6ZNE9 SNORD111-201ENST00000408139 94 ntBASIC1.68□□□□□ -2.14
RUFY4Q6ZNE9 RNU7-21P-201ENST00000459430 62 ntBASIC1.68□□□□□ -2.14
RUFY4Q6ZNE9 Y_RNA.677-201ENST00000516401 85 ntBASIC1.68□□□□□ -2.14
RUFY4Q6ZNE9 MIR4439-201ENST00000583746 80 ntBASIC1.68□□□□□ -2.14
RUFY4Q6ZNE9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RUFY4Q6ZNE9 AL161722.3-201ENST00000605789 2983 ntBASIC1.68□□□□□ -2.14
RUFY4Q6ZNE9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 Y_RNA.466-201ENST00000384294 113 ntBASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 SNORD38.2-201ENST00000384470 69 ntBASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 SNORA2B-201ENST00000384583 137 ntBASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 SNORA75.2-201ENST00000391138 150 ntBASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 SNORA75.3-201ENST00000391231 150 ntBASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 AC096949.1-201ENST00000412047 152 ntBASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 SNORA40.13-201ENST00000516379 120 ntBASIC1.67□□□□□ -2.14
RUFY4Q6ZNE9 SNORA31.24-201ENST00000517232 57 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 249.3 ms