Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC132825.6-201ENST00000638861 357 ntBASIC-1.84□□□□□ -2.7
CCDC171Q6TFL3 MIR124-2-201ENST00000385081 109 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 RNU6-780P-201ENST00000391030 104 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 MIR5591-201ENST00000578248 65 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 MIR548AE2-201ENST00000583456 67 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 AC133104.2-201ENST00000615272 193 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 MIR582-201ENST00000365731 98 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 AC097639.2-201ENST00000603159 172 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 AL050303.3-201ENST00000613704 284 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 MIR8485-201ENST00000401372 91 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 RPS3AP52-201ENST00000435639 297 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 RNU6-264P-201ENST00000517134 104 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 SNORD63-201ENST00000384262 68 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR516A2-201ENST00000384888 90 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR516A1-201ENST00000385033 90 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR628-201ENST00000385229 95 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR526A2-201ENST00000390198 65 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU6-592P-201ENST00000411333 103 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU6-956P-201ENST00000458868 103 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU6-507P-201ENST00000516045 100 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU6-911P-201ENST00000516523 104 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR5688-201ENST00000580619 83 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 AC007485.1-201ENST00000616755 206 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU4-10P-201ENST00000364383 140 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 RNU6-937P-201ENST00000384325 106 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MIR548E-201ENST00000408287 88 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 RNU6-588P-201ENST00000410281 105 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 RNU6-373P-201ENST00000411247 98 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 AC019235.1-201ENST00000503847 207 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MRPS35P2-201ENST00000508242 191 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 U4.2-201ENST00000618561 85 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MIR1246-201ENST00000636535 73 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MTND5P26-201ENST00000426018 1752 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 MIR548K-201ENST00000408406 116 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 PMCHL1-202ENST00000423102 261 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 AP001362.1-201ENST00000625165 124 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 SEPT14P8-201ENST00000508026 178 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 SCARNA15-202ENST00000516881 127 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 MIR4770-201ENST00000579149 58 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 AC138305.3-201ENST00000624988 240 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 MIR206-201ENST00000384872 86 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 MIR548F5-201ENST00000408421 86 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 AC096644.2-201ENST00000429278 159 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 MIR1270-201ENST00000459320 83 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 AC107027.2-201ENST00000512197 115 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 C8orf59P2-201ENST00000603441 271 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 MIR6129-201ENST00000616087 109 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 RNU6-850P-201ENST00000516934 103 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 AC245505.1-201ENST00000556398 224 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 AC119751.7-201ENST00000600494 245 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 AC006006.1-201ENST00000603082 144 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 MIR548O2-201ENST00000616090 70 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 MIR1321-201ENST00000637766 79 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.93□□□□□ -2.72
CCDC171Q6TFL3 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.93□□□□□ -2.72
CCDC171Q6TFL3 RNY1P6-201ENST00000384193 109 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms