Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 MIR337-201ENST00000362281 93 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 Y_RNA.94-201ENST00000363068 106 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-203P-201ENST00000384038 104 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-1237P-201ENST00000384777 107 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 RPL31P63-201ENST00000422565 375 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 SPINT5P-201ENST00000448174 155 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 AL513043.2-201ENST00000573941 143 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 MIR8081-201ENST00000611533 95 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 WWP1P1-201ENST00000466609 2769 ntBASIC2□□□□□ -2.09
CNKSR3Q6P9H4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CNKSR3Q6P9H4 RNY1P13-201ENST00000365030 105 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-524P-201ENST00000384270 107 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 SNORA67.5-201ENST00000391036 107 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 RNU7-48P-201ENST00000458875 63 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 RPS29P11-201ENST00000496507 171 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 AC019288.1-201ENST00000557918 224 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 CYP3A52P-201ENST00000563326 91 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 AL096840.1-201ENST00000603287 93 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 AC012676.2-201ENST00000619258 186 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CNKSR3Q6P9H4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 MIR181B2-201ENST00000385004 89 ntBASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 MIR520C-201ENST00000385005 87 ntBASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 RNU4-62P-201ENST00000410125 130 ntBASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 AP1B1P2-201ENST00000416196 106 ntBASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 RNA5SP445-201ENST00000515889 115 ntBASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 RNU7-41P-201ENST00000515917 61 ntBASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 MIR4255-201ENST00000579351 72 ntBASIC1.98□□□□□ -2.09
CNKSR3Q6P9H4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 SNORA2B-201ENST00000384583 137 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-447P-201ENST00000410293 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-355P-201ENST00000410427 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-791P-201ENST00000410467 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-705P-201ENST00000410601 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-860P-201ENST00000410860 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-785P-201ENST00000411324 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 AL161932.1-201ENST00000437408 146 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 SNORA44.1-201ENST00000517031 108 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 AL359821.1-201ENST00000605519 182 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 U6.90-201ENST00000614007 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 U6.70-201ENST00000620287 104 ntBASIC1.97□□□□□ -2.09
CNKSR3Q6P9H4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 RNU6-776P-201ENST00000364403 104 ntBASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 RNU6-1022P-201ENST00000365049 104 ntBASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 MIR194-1-201ENST00000384892 85 ntBASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 MIR502-201ENST00000606349 86 ntBASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 MIR4251-201ENST00000635819 61 ntBASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CNKSR3Q6P9H4 SNORD38B-201ENST00000384690 67 ntBASIC1.95□□□□□ -2.1
CNKSR3Q6P9H4 MTND5P40-201ENST00000559945 246 ntBASIC1.95□□□□□ -2.1
CNKSR3Q6P9H4 AC141846.1-201ENST00000568348 142 ntBASIC1.95□□□□□ -2.1
CNKSR3Q6P9H4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.95□□□□□ -2.1
CNKSR3Q6P9H4 AP001362.1-201ENST00000625165 124 ntBASIC1.95□□□□□ -2.1
CNKSR3Q6P9H4 SNORD38B-202ENST00000625943 69 ntBASIC1.95□□□□□ -2.1
CNKSR3Q6P9H4 MIR4662A-201ENST00000637499 67 ntBASIC1.95□□□□□ -2.1
CNKSR3Q6P9H4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CNKSR3Q6P9H4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 RNU6-439P-201ENST00000384188 106 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 MIR653-201ENST00000385279 96 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 AC244023.1-201ENST00000426884 112 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 AC009474.2-201ENST00000451383 136 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 TRMT112P2-201ENST00000512910 132 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 MIR4303-201ENST00000581299 66 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 AC242498.1-201ENST00000604134 111 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 MIR7111-201ENST00000619751 72 ntBASIC1.94□□□□□ -2.1
CNKSR3Q6P9H4 MIR519C-201ENST00000385053 87 ntBASIC1.93□□□□□ -2.1
CNKSR3Q6P9H4 MIR889-201ENST00000401280 79 ntBASIC1.93□□□□□ -2.1
CNKSR3Q6P9H4 AC087499.7-201ENST00000441958 109 ntBASIC1.93□□□□□ -2.1
CNKSR3Q6P9H4 AC093729.1-201ENST00000513074 128 ntBASIC1.93□□□□□ -2.1
CNKSR3Q6P9H4 MIR4712-201ENST00000583750 82 ntBASIC1.93□□□□□ -2.1
CNKSR3Q6P9H4 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
CNKSR3Q6P9H4 MIR8070-201ENST00000616510 88 ntBASIC1.93□□□□□ -2.1
CNKSR3Q6P9H4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 HSBP1P2-201ENST00000299671 229 ntBASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 RNA5SP133-201ENST00000363368 119 ntBASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 SNORD38.2-201ENST00000384470 69 ntBASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 MIR30A-201ENST00000385092 71 ntBASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CNKSR3Q6P9H4 AC004965.1-201ENST00000413033 213 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms