Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
RNF220Q5VTB9 RNU6-403P-201ENST00000363163 104 ntBASIC0.92□□□□□ -2.26
RNF220Q5VTB9 SNORD114-10-201ENST00000363409 72 ntBASIC0.92□□□□□ -2.26
RNF220Q5VTB9 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
RNF220Q5VTB9 Y_RNA.586-201ENST00000391146 98 ntBASIC0.92□□□□□ -2.26
RNF220Q5VTB9 MIR1287-201ENST00000408492 90 ntBASIC0.92□□□□□ -2.26
RNF220Q5VTB9 RNU6-1211P-201ENST00000459179 105 ntBASIC0.92□□□□□ -2.26
RNF220Q5VTB9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.92□□□□□ -2.26
RNF220Q5VTB9 MIR8070-201ENST00000616510 88 ntBASIC0.92□□□□□ -2.26
RNF220Q5VTB9 Y_RNA.226-201ENST00000364337 114 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 MIR573-201ENST00000384964 99 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 MIR605-201ENST00000385078 83 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 MIR548M-201ENST00000408260 86 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 AC096949.1-201ENST00000412047 152 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 AC244098.3-201ENST00000424803 96 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 SNORD67.1-201ENST00000516618 108 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 RNU7-137P-201ENST00000516788 62 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 AC090897.1-201ENST00000580909 226 ntBASIC0.91□□□□□ -2.26
RNF220Q5VTB9 RNU6-235P-201ENST00000362644 107 ntBASIC0.9□□□□□ -2.27
RNF220Q5VTB9 Y_RNA.198-201ENST00000364013 98 ntBASIC0.9□□□□□ -2.27
RNF220Q5VTB9 Y_RNA.213-201ENST00000364178 111 ntBASIC0.9□□□□□ -2.27
RNF220Q5VTB9 AC008608.1-201ENST00000603910 127 ntBASIC0.9□□□□□ -2.27
RNF220Q5VTB9 FAM71BP1-201ENST00000604431 523 ntBASIC0.9□□□□□ -2.27
RNF220Q5VTB9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
RNF220Q5VTB9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 RNU6-392P-201ENST00000364926 101 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 RNU6-110P-201ENST00000384508 104 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 MIR499A-201ENST00000384903 122 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 MIR1270-201ENST00000459320 83 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 COX6CP6-201ENST00000490840 228 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 AC133485.1-201ENST00000567176 124 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 MIR3163-201ENST00000581592 73 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 MIR6082-201ENST00000613604 109 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 MIR8066-201ENST00000617280 78 ntBASIC0.89□□□□□ -2.27
RNF220Q5VTB9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 RNU6-704P-201ENST00000364162 103 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 RNU6-53P-201ENST00000365367 106 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 SNORA72.6-201ENST00000384520 129 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 Y_RNA.528-201ENST00000384575 108 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 RNU6-781P-201ENST00000516377 101 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 RNU6-1061P-201ENST00000516530 99 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 RNU7-6P-201ENST00000516845 62 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 RNU6-448P-201ENST00000517052 107 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 AL359881.1-201ENST00000602916 267 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.88□□□□□ -2.27
RNF220Q5VTB9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
RNF220Q5VTB9 RNU6-765P-201ENST00000516916 99 ntBASIC0.87□□□□□ -2.27
RNF220Q5VTB9 RNU6-971P-201ENST00000516920 106 ntBASIC0.87□□□□□ -2.27
RNF220Q5VTB9 SNORD58C-201ENST00000365223 64 ntBASIC0.86□□□□□ -2.27
RNF220Q5VTB9 RNU6-187P-201ENST00000384139 106 ntBASIC0.86□□□□□ -2.27
RNF220Q5VTB9 SNORD100-201ENST00000408573 76 ntBASIC0.86□□□□□ -2.27
RNF220Q5VTB9 RNA5SP222-201ENST00000411039 105 ntBASIC0.86□□□□□ -2.27
RNF220Q5VTB9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.86□□□□□ -2.27
RNF220Q5VTB9 AP003327.1-201ENST00000529684 127 ntBASIC0.86□□□□□ -2.27
RNF220Q5VTB9 AC025166.1-201ENST00000612411 163 ntBASIC0.86□□□□□ -2.27
RNF220Q5VTB9 AC105081.1-201ENST00000617727 106 ntBASIC0.86□□□□□ -2.27
RNF220Q5VTB9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.85□□□□□ -2.27
RNF220Q5VTB9 MT-TI-201ENST00000387365 69 ntBASIC0.85□□□□□ -2.27
RNF220Q5VTB9 DEFB131E-201ENST00000532329 154 ntBASIC0.85□□□□□ -2.27
RNF220Q5VTB9 MIR3612-201ENST00000579753 87 ntBASIC0.85□□□□□ -2.27
RNF220Q5VTB9 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
RNF220Q5VTB9 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
RNF220Q5VTB9 RNA5SP133-201ENST00000363368 119 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 RNA5SP117-201ENST00000365294 118 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 MIRLET7F2-201ENST00000385277 83 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 AC002350.1-201ENST00000490759 375 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 SNORA25.16-201ENST00000516741 121 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 RNA5SP102-201ENST00000516865 106 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 AC087741.2-201ENST00000619415 172 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 U6.109-201ENST00000636749 87 ntBASIC0.84□□□□□ -2.27
RNF220Q5VTB9 RNU4-58P-201ENST00000363192 141 ntBASIC0.83□□□□□ -2.28
RNF220Q5VTB9 SNORD114-27-201ENST00000363766 70 ntBASIC0.83□□□□□ -2.28
RNF220Q5VTB9 Y_RNA.346-201ENST00000365385 112 ntBASIC0.83□□□□□ -2.28
RNF220Q5VTB9 RNU6-80P-201ENST00000384195 107 ntBASIC0.83□□□□□ -2.28
RNF220Q5VTB9 RNU6-616P-201ENST00000384353 107 ntBASIC0.83□□□□□ -2.28
RNF220Q5VTB9 MIR206-201ENST00000384872 86 ntBASIC0.83□□□□□ -2.28
RNF220Q5VTB9 AC138749.4-201ENST00000563970 127 ntBASIC0.83□□□□□ -2.28
RNF220Q5VTB9 AL078603.1-201ENST00000603824 313 ntBASIC0.83□□□□□ -2.28
RNF220Q5VTB9 MIR6504-201ENST00000613520 61 ntBASIC0.83□□□□□ -2.28
RNF220Q5VTB9 RNY1P2-201ENST00000364820 117 ntBASIC0.82□□□□□ -2.28
RNF220Q5VTB9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
RNF220Q5VTB9 RNU6-772P-201ENST00000516042 105 ntBASIC0.82□□□□□ -2.28
RNF220Q5VTB9 RNU7-2P-201ENST00000516096 62 ntBASIC0.82□□□□□ -2.28
RNF220Q5VTB9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.82□□□□□ -2.28
RNF220Q5VTB9 MTND5P18-201ENST00000445624 1801 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 MIR18A-201ENST00000362310 71 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 SNORD115-19-201ENST00000363098 82 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 Y_RNA.98-201ENST00000363109 102 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 SNORD115-18-201ENST00000363293 82 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 Y_RNA.118-201ENST00000363300 101 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 SNORD115-17-201ENST00000364612 82 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 RNU6-1321P-201ENST00000390905 107 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 MIR1276-201ENST00000408707 83 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 RNU6-531P-201ENST00000516694 104 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms