Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
RFX4Q33E94 Y_RNA.423-201ENST00000384057 113 ntBASIC0.04□□□□□ -2.4
RFX4Q33E94 SNORA32-201ENST00000384072 121 ntBASIC0.04□□□□□ -2.4
RFX4Q33E94 RNU7-113P-201ENST00000459273 62 ntBASIC0.04□□□□□ -2.4
RFX4Q33E94 AL359881.1-201ENST00000602916 267 ntBASIC0.04□□□□□ -2.4
RFX4Q33E94 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.04□□□□□ -2.4
RFX4Q33E94 SNORD115-2-201ENST00000362842 82 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 Y_RNA.75-201ENST00000362927 97 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 Y_RNA.133-201ENST00000363428 110 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 RNU6-1082P-201ENST00000364574 107 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 SNORD115-20-201ENST00000365099 82 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 RNU6-1126P-201ENST00000384002 107 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 MTCYBP9-201ENST00000431021 303 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 RNU6-848P-201ENST00000515948 107 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 RNU6-617P-201ENST00000516147 107 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 RNU6-473P-201ENST00000516164 107 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 RNU6-1194P-201ENST00000516208 104 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 RNU6-1049P-201ENST00000516414 107 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 DEFB131E-201ENST00000532329 154 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 AC138749.4-201ENST00000563970 127 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 MIR4752-201ENST00000579672 72 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.03□□□□□ -2.4
RFX4Q33E94 RNU1-29P-201ENST00000606574 126 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 U6.109-201ENST00000636749 87 ntBASIC0.03□□□□□ -2.4
RFX4Q33E94 MIR330-201ENST00000362196 94 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 RNU6-768P-201ENST00000384683 107 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 MIRLET7F2-201ENST00000385277 83 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 RNU6-918P-201ENST00000391219 106 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 MIR1270-201ENST00000459320 83 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 RNU2-35P-201ENST00000516446 142 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 RNA5SP33-201ENST00000516687 98 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 RNU7-137P-201ENST00000516788 62 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 MIR3128-201ENST00000581957 66 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 MIR548AE2-201ENST00000583456 67 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 AL360085.1-201ENST00000604713 532 ntBASIC0.02□□□□□ -2.41
RFX4Q33E94 RNU4-58P-201ENST00000363192 141 ntBASIC0.01□□□□□ -2.41
RFX4Q33E94 Y_RNA.521-201ENST00000384560 114 ntBASIC0.01□□□□□ -2.41
RFX4Q33E94 AL022718.1-201ENST00000412004 84 ntBASIC0.01□□□□□ -2.41
RFX4Q33E94 AC108059.2-201ENST00000434626 151 ntBASIC0.01□□□□□ -2.41
RFX4Q33E94 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
RFX4Q33E94 RNU6-1232P-201ENST00000516299 86 ntBASIC0.01□□□□□ -2.41
RFX4Q33E94 SNORD67.1-201ENST00000516618 108 ntBASIC0.01□□□□□ -2.41
RFX4Q33E94 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
RFX4Q33E94 Y_RNA.60-201ENST00000362831 98 ntBASIC0□□□□□ -2.41
RFX4Q33E94 RNU6-702P-201ENST00000364982 107 ntBASIC0□□□□□ -2.41
RFX4Q33E94 Y_RNA.350-201ENST00000365409 98 ntBASIC0□□□□□ -2.41
RFX4Q33E94 RNU6-127P-201ENST00000390897 107 ntBASIC0□□□□□ -2.41
RFX4Q33E94 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0□□□□□ -2.41
RFX4Q33E94 MIR3149-201ENST00000584629 83 ntBASIC0□□□□□ -2.41
RFX4Q33E94 MIR4768-201ENST00000585270 74 ntBASIC0□□□□□ -2.41
RFX4Q33E94 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
RFX4Q33E94 MIR101-2-201ENST00000362195 79 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 SNORD114-26-201ENST00000363543 72 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 RNY1P2-201ENST00000364820 117 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 RNU6-690P-201ENST00000365242 106 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 RNU6-716P-201ENST00000365621 103 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 RNU6-47P-201ENST00000383866 107 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 SNORA2A-201ENST00000383885 135 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 MIR610-201ENST00000385139 96 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 RNU7-129P-201ENST00000516128 62 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 RNU6-111P-201ENST00000517179 105 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 RNU2-60P-201ENST00000517290 128 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 MIR4305-201ENST00000583252 102 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 MIR8087-201ENST00000612745 78 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 AC105081.1-201ENST00000617727 106 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 MIR7111-201ENST00000619751 72 ntBASIC-0.01□□□□□ -2.41
RFX4Q33E94 SNORD114-5-201ENST00000362928 70 ntBASIC-0.02□□□□□ -2.41
RFX4Q33E94 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.02□□□□□ -2.41
RFX4Q33E94 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.02□□□□□ -2.41
RFX4Q33E94 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.02□□□□□ -2.41
RFX4Q33E94 RNU4-71P-201ENST00000516258 113 ntBASIC-0.02□□□□□ -2.41
RFX4Q33E94 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
RFX4Q33E94 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 SNORD115-24-201ENST00000363528 82 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 RNY1P11-201ENST00000363759 113 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 RNU6-726P-201ENST00000364680 107 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 RNA5SP63-201ENST00000391225 112 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 MIR548H2-201ENST00000408874 88 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 AC244505.6-201ENST00000452829 130 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 RNU6-240P-201ENST00000516098 97 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 AC098479.1-201ENST00000609225 154 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 AC062037.2-201ENST00000610137 73 ntBASIC-0.03□□□□□ -2.41
RFX4Q33E94 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
RFX4Q33E94 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.04□□□□□ -2.42
RFX4Q33E94 RNU6-508P-201ENST00000363231 103 ntBASIC-0.04□□□□□ -2.42
RFX4Q33E94 SNORD114-10-201ENST00000363409 72 ntBASIC-0.04□□□□□ -2.42
RFX4Q33E94 RNU6-694P-201ENST00000364071 147 ntBASIC-0.04□□□□□ -2.42
RFX4Q33E94 RNA5SP128-201ENST00000365305 116 ntBASIC-0.04□□□□□ -2.42
RFX4Q33E94 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.04□□□□□ -2.42
RFX4Q33E94 MIR643-201ENST00000385267 97 ntBASIC-0.04□□□□□ -2.42
RFX4Q33E94 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.04□□□□□ -2.42
RFX4Q33E94 RPL39P34-201ENST00000477141 156 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 301.5 ms