Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 Y_RNA.168-201ENST00000363740 102 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 SNORD114-27-201ENST00000363766 70 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 Y_RNA.299-201ENST00000364973 94 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 RNU6-44P-201ENST00000384045 107 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 SNORA25-201ENST00000384384 134 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 SNORA80D-201ENST00000384488 135 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 RNU6-880P-201ENST00000384526 107 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 AC087343.1-201ENST00000477341 475 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 RNU6-589P-201ENST00000516485 107 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 MIR377-201ENST00000362145 69 ntBASIC1.33□□□□□ -2.2
ATP2B3Q16720 SNORA63.4-201ENST00000362763 126 ntBASIC1.33□□□□□ -2.2
ATP2B3Q16720 SNORD113.3-201ENST00000364630 78 ntBASIC1.33□□□□□ -2.2
ATP2B3Q16720 RNU6-580P-201ENST00000365159 107 ntBASIC1.33□□□□□ -2.2
ATP2B3Q16720 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
ATP2B3Q16720 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
ATP2B3Q16720 RNU6-834P-201ENST00000362367 110 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 SNORD115-19-201ENST00000363098 82 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 SNORD115-18-201ENST00000363293 82 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 SNORD115-17-201ENST00000364612 82 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 MIR206-201ENST00000384872 86 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 U8.15-201ENST00000390947 134 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 SNORD77B-201ENST00000391112 67 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 MRPL35P3-201ENST00000421557 364 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 RNU7-40P-201ENST00000516397 64 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 RNU7-137P-201ENST00000516788 62 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.32□□□□□ -2.2
ATP2B3Q16720 SNORD12-201ENST00000391002 90 ntBASIC1.31□□□□□ -2.2
ATP2B3Q16720 RNY4P18-201ENST00000391107 89 ntBASIC1.31□□□□□ -2.2
ATP2B3Q16720 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.31□□□□□ -2.2
ATP2B3Q16720 RNU7-90P-201ENST00000459216 62 ntBASIC1.31□□□□□ -2.2
ATP2B3Q16720 Y_RNA.709-201ENST00000516952 92 ntBASIC1.31□□□□□ -2.2
ATP2B3Q16720 FAM71BP1-201ENST00000604431 523 ntBASIC1.31□□□□□ -2.2
ATP2B3Q16720 AC106800.4-201ENST00000614905 153 ntBASIC1.31□□□□□ -2.2
ATP2B3Q16720 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
ATP2B3Q16720 SNORA22-201ENST00000383907 134 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 RNU6-949P-201ENST00000384040 107 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
ATP2B3Q16720 RNU6-816P-201ENST00000390914 107 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 RNU6-1268P-201ENST00000391214 107 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 RNU6-1239P-201ENST00000391310 107 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 SNORA7.5-201ENST00000410672 110 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 AC096949.1-201ENST00000412047 152 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 AC063976.4-201ENST00000421971 163 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 AL353813.1-201ENST00000440700 253 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 MIR4771-2-201ENST00000577758 74 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 MIR4771-1-201ENST00000582617 74 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 SNORA4-201ENST00000584302 138 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 AC012676.2-201ENST00000619258 186 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 AC027335.2-201ENST00000624030 375 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 MIR6767-201ENST00000637302 66 ntBASIC1.3□□□□□ -2.2
ATP2B3Q16720 Y_RNA.85-201ENST00000363014 111 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 RNU6-1107P-201ENST00000364817 104 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 U8.6-201ENST00000364939 135 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 Y_RNA.448-201ENST00000384185 108 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 MIR605-201ENST00000385078 83 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 RNU6-1321P-201ENST00000390905 107 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 AL035461.1-201ENST00000421490 332 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 RNU6-521P-201ENST00000516663 105 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.29□□□□□ -2.2
ATP2B3Q16720 AC020891.4-201ENST00000605745 93 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 SNORD114-21-201ENST00000606412 72 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 uc_338.28-201ENST00000612082 187 ntBASIC1.29□□□□□ -2.2
ATP2B3Q16720 AC023934.1-201ENST00000574529 2389 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 RNU4-67P-201ENST00000364569 141 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 RNU1-93P-201ENST00000364704 169 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 Y_RNA.281-201ENST00000364774 94 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 RNU6-934P-201ENST00000365154 107 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 SNORD114-22-201ENST00000365423 72 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 RPL39P25-201ENST00000449384 154 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 RNU6-919P-201ENST00000516731 104 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 MIR4679-2-201ENST00000578358 77 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 AL162726.3-218ENST00000636401 95 ntBASIC1.28□□□□□ -2.2
ATP2B3Q16720 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
ATP2B3Q16720 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
ATP2B3Q16720 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
ATP2B3Q16720 RNU6-369P-201ENST00000362515 102 ntBASIC1.27□□□□□ -2.21
ATP2B3Q16720 Y_RNA.155-201ENST00000363632 101 ntBASIC1.27□□□□□ -2.21
ATP2B3Q16720 Y_RNA.191-201ENST00000363972 113 ntBASIC1.27□□□□□ -2.21
ATP2B3Q16720 RNU6-994P-201ENST00000410507 111 ntBASIC1.27□□□□□ -2.21
ATP2B3Q16720 SNORD124-201ENST00000459577 104 ntBASIC1.27□□□□□ -2.21
ATP2B3Q16720 RPL39P34-201ENST00000477141 156 ntBASIC1.27□□□□□ -2.21
ATP2B3Q16720 RNU7-2P-201ENST00000516096 62 ntBASIC1.27□□□□□ -2.21
ATP2B3Q16720 AC068339.1-201ENST00000526965 141 ntBASIC1.27□□□□□ -2.21
ATP2B3Q16720 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.27□□□□□ -2.21
ATP2B3Q16720 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ATP2B3Q16720 MT-TF-201ENST00000387314 71 ntBASIC1.26□□□□□ -2.21
ATP2B3Q16720 RNU6-679P-201ENST00000391003 106 ntBASIC1.26□□□□□ -2.21
ATP2B3Q16720 SNORD111-201ENST00000408139 94 ntBASIC1.26□□□□□ -2.21
ATP2B3Q16720 SNORA19.1-201ENST00000410656 129 ntBASIC1.26□□□□□ -2.21
ATP2B3Q16720 RNU7-185P-201ENST00000459215 60 ntBASIC1.26□□□□□ -2.21
ATP2B3Q16720 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
ATP2B3Q16720 RNU1-124P-201ENST00000363861 145 ntBASIC1.25□□□□□ -2.21
ATP2B3Q16720 SNORD115-35-201ENST00000365122 82 ntBASIC1.25□□□□□ -2.21
ATP2B3Q16720 SNORD93-201ENST00000408813 74 ntBASIC1.25□□□□□ -2.21
ATP2B3Q16720 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
ATP2B3Q16720 MIR4452-201ENST00000583004 71 ntBASIC1.25□□□□□ -2.21
ATP2B3Q16720 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms