Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MIR181B2-201ENST00000385004 89 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 RNU6-1165P-201ENST00000410119 107 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 RNU7-62P-201ENST00000458856 62 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 snoU13.9-201ENST00000458927 103 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 AL513043.2-201ENST00000573941 143 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 MIR4648-201ENST00000580107 72 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 AC090897.1-201ENST00000580909 226 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 MIR6873-201ENST00000622788 63 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 MIR6516-201ENST00000630554 81 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PCDH1Q08174 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PCDH1Q08174 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCDH1Q08174 RNU11-2P-201ENST00000516898 142 ntBASIC2.05□□□□□ -2.08
PCDH1Q08174 AC138749.4-201ENST00000563970 127 ntBASIC2.05□□□□□ -2.08
PCDH1Q08174 MIR1273D-201ENST00000577266 86 ntBASIC2.05□□□□□ -2.08
PCDH1Q08174 AC020891.4-201ENST00000605745 93 ntBASIC2.05□□□□□ -2.08
PCDH1Q08174 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
PCDH1Q08174 MIR302D-201ENST00000362275 68 ntBASIC2.04□□□□□ -2.08
PCDH1Q08174 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCDH1Q08174 MIR1185-1-201ENST00000408598 86 ntBASIC2.04□□□□□ -2.08
PCDH1Q08174 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.04□□□□□ -2.08
PCDH1Q08174 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.04□□□□□ -2.08
PCDH1Q08174 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.04□□□□□ -2.08
PCDH1Q08174 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PCDH1Q08174 snoU13.15-201ENST00000459407 104 ntBASIC2.04□□□□□ -2.08
PCDH1Q08174 RNU7-171P-201ENST00000459581 62 ntBASIC2.04□□□□□ -2.08
PCDH1Q08174 AC005908.1-201ENST00000468701 347 ntBASIC2.04□□□□□ -2.08
PCDH1Q08174 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
PCDH1Q08174 AC025521.1-201ENST00000621624 286 ntBASIC2.04□□□□□ -2.08
PCDH1Q08174 U6.109-201ENST00000636749 87 ntBASIC2.04□□□□□ -2.08
PCDH1Q08174 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PCDH1Q08174 MIR103A2-201ENST00000362154 78 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 Y_RNA.4-201ENST00000362333 112 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 RNU6-633P-201ENST00000362612 103 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 RNU6-509P-201ENST00000363519 107 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 Y_RNA.191-201ENST00000363972 113 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 Y_RNA.426-201ENST00000384068 113 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PCDH1Q08174 RNU6-613P-201ENST00000410412 108 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 Y_RNA.611-201ENST00000410682 108 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 HMGN2P23-201ENST00000456759 269 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 AC025033.1-201ENST00000463883 194 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 RPL30P7-201ENST00000479312 323 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 RNU6-237P-201ENST00000515985 71 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 MIR4500-201ENST00000579472 76 ntBASIC2.03□□□□□ -2.08
PCDH1Q08174 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
PCDH1Q08174 MIR377-201ENST00000362145 69 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 RNA5SP264-201ENST00000363115 107 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 SNORD1A-201ENST00000364968 72 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 MIR30A-201ENST00000385092 71 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 MT-TF-201ENST00000387314 71 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 MIR1255A-201ENST00000408338 113 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 RN7SKP223-201ENST00000410582 62 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 AL161932.1-201ENST00000437408 146 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 SNORA44.1-201ENST00000517031 108 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 AC019176.1-201ENST00000518519 225 ntBASIC2.02□□□□□ -2.09
PCDH1Q08174 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCDH1Q08174 SNORD33-201ENST00000362761 85 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 RNA5SP133-201ENST00000363368 119 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 RNU6-787P-201ENST00000384032 107 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 RNA5SP225-201ENST00000410874 135 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 SNRPGP12-201ENST00000449481 213 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 AC079140.2-201ENST00000506193 142 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 MIR4666B-201ENST00000578142 81 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 MIR548BB-201ENST00000626714 66 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 MIR219B-201ENST00000637023 88 ntBASIC2.01□□□□□ -2.09
PCDH1Q08174 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
PCDH1Q08174 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
PCDH1Q08174 Y_RNA.119-201ENST00000363301 96 ntBASIC2□□□□□ -2.09
PCDH1Q08174 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2□□□□□ -2.09
PCDH1Q08174 AC245517.4-201ENST00000448601 281 ntBASIC2□□□□□ -2.09
PCDH1Q08174 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
PCDH1Q08174 uc_338.6-201ENST00000613544 171 ntBASIC2□□□□□ -2.09
PCDH1Q08174 MIR8066-201ENST00000617280 78 ntBASIC2□□□□□ -2.09
PCDH1Q08174 AC006160.2-201ENST00000637708 154 ntBASIC2□□□□□ -2.09
PCDH1Q08174 RNU6-654P-201ENST00000364373 107 ntBASIC1.99□□□□□ -2.09
PCDH1Q08174 Y_RNA.437-201ENST00000384113 113 ntBASIC1.99□□□□□ -2.09
PCDH1Q08174 SNORA67.3-201ENST00000384366 140 ntBASIC1.99□□□□□ -2.09
PCDH1Q08174 RNU6-1065P-201ENST00000384513 106 ntBASIC1.99□□□□□ -2.09
PCDH1Q08174 MIR1289-2-201ENST00000408360 111 ntBASIC1.99□□□□□ -2.09
PCDH1Q08174 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
PCDH1Q08174 uc_338.20-201ENST00000621563 178 ntBASIC1.99□□□□□ -2.09
PCDH1Q08174 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDH1Q08174 RNA5SP95-201ENST00000410319 137 ntBASIC1.98□□□□□ -2.09
PCDH1Q08174 RNA5SP395-201ENST00000516567 118 ntBASIC1.98□□□□□ -2.09
PCDH1Q08174 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
PCDH1Q08174 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
PCDH1Q08174 RNU6-850P-201ENST00000516934 103 ntBASIC1.98□□□□□ -2.09
PCDH1Q08174 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.98□□□□□ -2.09
PCDH1Q08174 MIR3937-201ENST00000580135 106 ntBASIC1.98□□□□□ -2.09
PCDH1Q08174 AC008163.1-202ENST00000636004 2889 ntBASIC1.97□□□□□ -2.09
PCDH1Q08174 Y_RNA.57-201ENST00000362806 113 ntBASIC1.97□□□□□ -2.09
PCDH1Q08174 RNU6-571P-201ENST00000384128 107 ntBASIC1.97□□□□□ -2.09
PCDH1Q08174 RNU4-83P-201ENST00000410863 133 ntBASIC1.97□□□□□ -2.09
PCDH1Q08174 MIR3664-201ENST00000579074 99 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms