Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC105081.1-201ENST00000617727 106 ntBASIC2.05□□□□□ -2.08
ERVFC1P60507 AC012676.2-201ENST00000619258 186 ntBASIC2.05□□□□□ -2.08
ERVFC1P60507 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.04□□□□□ -2.08
ERVFC1P60507 SNORD13-201ENST00000459299 104 ntBASIC2.04□□□□□ -2.08
ERVFC1P60507 AC141846.1-201ENST00000568348 142 ntBASIC2.04□□□□□ -2.08
ERVFC1P60507 AL513043.2-201ENST00000573941 143 ntBASIC2.04□□□□□ -2.08
ERVFC1P60507 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
ERVFC1P60507 MIR4781-201ENST00000585250 76 ntBASIC2.04□□□□□ -2.08
ERVFC1P60507 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ERVFC1P60507 MIR4662A-201ENST00000637499 67 ntBASIC2.04□□□□□ -2.08
ERVFC1P60507 Y_RNA.226-201ENST00000364337 114 ntBASIC2.03□□□□□ -2.08
ERVFC1P60507 RNY1P2-201ENST00000364820 117 ntBASIC2.03□□□□□ -2.08
ERVFC1P60507 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
ERVFC1P60507 RNA5SP190-201ENST00000365222 118 ntBASIC2.03□□□□□ -2.08
ERVFC1P60507 RNU6-652P-201ENST00000365488 107 ntBASIC2.03□□□□□ -2.08
ERVFC1P60507 SNORA2B-201ENST00000384583 137 ntBASIC2.03□□□□□ -2.08
ERVFC1P60507 RNU7-41P-201ENST00000515917 61 ntBASIC2.03□□□□□ -2.08
ERVFC1P60507 AL662814.1-201ENST00000617364 121 ntBASIC2.03□□□□□ -2.08
ERVFC1P60507 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ERVFC1P60507 AP000648.3-201ENST00000623539 4507 ntBASIC2.03□□□□□ -2.09
ERVFC1P60507 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
ERVFC1P60507 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
ERVFC1P60507 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ERVFC1P60507 RNA5SP133-201ENST00000363368 119 ntBASIC2.02□□□□□ -2.09
ERVFC1P60507 Y_RNA.316-201ENST00000365118 111 ntBASIC2.02□□□□□ -2.09
ERVFC1P60507 RNU6-949P-201ENST00000384040 107 ntBASIC2.02□□□□□ -2.09
ERVFC1P60507 MIR181B2-201ENST00000385004 89 ntBASIC2.02□□□□□ -2.09
ERVFC1P60507 MTND5P40-201ENST00000559945 246 ntBASIC2.02□□□□□ -2.09
ERVFC1P60507 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.02□□□□□ -2.09
ERVFC1P60507 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
ERVFC1P60507 AC020891.4-201ENST00000605745 93 ntBASIC2.02□□□□□ -2.09
ERVFC1P60507 MIR8081-201ENST00000611533 95 ntBASIC2.02□□□□□ -2.09
ERVFC1P60507 MIR378A-201ENST00000362177 66 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 RNA5SP48-201ENST00000363969 126 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 SNORD115-27-201ENST00000364430 82 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 MIR519C-201ENST00000385053 87 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 MIR9-3-201ENST00000385084 90 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 AC009474.2-201ENST00000451383 136 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 SNORA25.15-201ENST00000516487 89 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 AC133485.1-201ENST00000567176 124 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 snoU13.31-201ENST00000607291 104 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.01□□□□□ -2.09
ERVFC1P60507 WWP1P1-201ENST00000466609 2769 ntBASIC2.01□□□□□ -2.09
ERVFC1P60507 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
ERVFC1P60507 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
ERVFC1P60507 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2□□□□□ -2.09
ERVFC1P60507 Y_RNA.94-201ENST00000363068 106 ntBASIC2□□□□□ -2.09
ERVFC1P60507 RNU6-524P-201ENST00000384270 107 ntBASIC2□□□□□ -2.09
ERVFC1P60507 RNU6-1237P-201ENST00000384777 107 ntBASIC2□□□□□ -2.09
ERVFC1P60507 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
ERVFC1P60507 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
ERVFC1P60507 RNA5SP237-201ENST00000410414 113 ntBASIC2□□□□□ -2.09
ERVFC1P60507 AC244023.1-201ENST00000426884 112 ntBASIC2□□□□□ -2.09
ERVFC1P60507 snoU13.2-201ENST00000459201 104 ntBASIC2□□□□□ -2.09
ERVFC1P60507 RPS29P11-201ENST00000496507 171 ntBASIC2□□□□□ -2.09
ERVFC1P60507 AC093729.1-201ENST00000513074 128 ntBASIC2□□□□□ -2.09
ERVFC1P60507 MIR4299-201ENST00000577899 72 ntBASIC2□□□□□ -2.09
ERVFC1P60507 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2□□□□□ -2.09
ERVFC1P60507 AC242498.1-201ENST00000604134 111 ntBASIC2□□□□□ -2.09
ERVFC1P60507 AC084768.2-201ENST00000622736 221 ntBASIC2□□□□□ -2.09
ERVFC1P60507 MIR563-201ENST00000385080 79 ntBASIC1.99□□□□□ -2.09
ERVFC1P60507 RNU6-65P-201ENST00000516332 98 ntBASIC1.99□□□□□ -2.09
ERVFC1P60507 AL773524.1-201ENST00000614065 229 ntBASIC1.99□□□□□ -2.09
ERVFC1P60507 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
ERVFC1P60507 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ERVFC1P60507 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ERVFC1P60507 RNU6-776P-201ENST00000364403 104 ntBASIC1.98□□□□□ -2.09
ERVFC1P60507 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
ERVFC1P60507 RNU6-1022P-201ENST00000365049 104 ntBASIC1.98□□□□□ -2.09
ERVFC1P60507 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ERVFC1P60507 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
ERVFC1P60507 AC140658.3-201ENST00000567603 271 ntBASIC1.98□□□□□ -2.09
ERVFC1P60507 AP000753.3-201ENST00000604083 169 ntBASIC1.98□□□□□ -2.09
ERVFC1P60507 PRELID3BP2-201ENST00000605362 201 ntBASIC1.98□□□□□ -2.09
ERVFC1P60507 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ERVFC1P60507 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ERVFC1P60507 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ERVFC1P60507 SNORD41-201ENST00000386967 70 ntBASIC1.97□□□□□ -2.09
ERVFC1P60507 RNU4-62P-201ENST00000410125 130 ntBASIC1.97□□□□□ -2.09
ERVFC1P60507 JTBP1-201ENST00000441314 247 ntBASIC1.97□□□□□ -2.09
ERVFC1P60507 SNORD111.1-201ENST00000516421 86 ntBASIC1.97□□□□□ -2.09
ERVFC1P60507 RNU6-250P-201ENST00000516958 103 ntBASIC1.97□□□□□ -2.09
ERVFC1P60507 MIR8066-201ENST00000617280 78 ntBASIC1.97□□□□□ -2.09
ERVFC1P60507 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
ERVFC1P60507 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ERVFC1P60507 Y_RNA.168-201ENST00000363740 102 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 MIR1287-201ENST00000408492 90 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 MIR1302-7-201ENST00000408841 72 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 AC244636.1-201ENST00000421152 228 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 AC087499.7-201ENST00000441958 109 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 SNRPGP12-201ENST00000449481 213 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 RNA5SP445-201ENST00000515889 115 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 RNA5SP364-201ENST00000516938 78 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 AL357312.1-201ENST00000603879 298 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.96□□□□□ -2.1
ERVFC1P60507 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ERVFC1P60507 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
ERVFC1P60507 MIR513A1-201ENST00000385138 129 ntBASIC1.95□□□□□ -2.1
ERVFC1P60507 RNA5SP212-201ENST00000391223 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms