Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNA5SP99-201ENST00000364020 114 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 RNU6-865P-201ENST00000364772 107 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 MT-TF-201ENST00000387314 71 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 U8.15-201ENST00000390947 134 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 MRPL35P3-201ENST00000421557 364 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 RNU6-904P-201ENST00000516206 101 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.36□□□□□ -2.19
CLRN1P58418 AC023827.1-201ENST00000569247 97 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 AC012676.2-201ENST00000619258 186 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 RNU6-832P-201ENST00000363319 107 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU4-36P-201ENST00000364294 144 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-1201P-201ENST00000384227 107 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 MIR34C-201ENST00000384831 77 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-447P-201ENST00000410293 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNA5SP89-201ENST00000410300 108 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-1118P-201ENST00000410382 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-1076P-201ENST00000410397 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-355P-201ENST00000410427 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-791P-201ENST00000410467 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-705P-201ENST00000410601 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-1100P-201ENST00000410691 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-860P-201ENST00000410860 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-1217P-201ENST00000411276 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-785P-201ENST00000411324 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 MIR18B-201ENST00000454574 71 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU7-48P-201ENST00000458875 63 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 SNORD13-201ENST00000459299 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 UBL5P1-201ENST00000507979 193 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 RNU6-168P-201ENST00000516189 101 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 SNORA70.22-201ENST00000517160 124 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 AC133485.1-201ENST00000567176 124 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 U6.90-201ENST00000614007 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 MIR376B-201ENST00000614515 100 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 U6.70-201ENST00000620287 104 ntBASIC1.35□□□□□ -2.19
CLRN1P58418 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CLRN1P58418 Y_RNA.140-201ENST00000363474 103 ntBASIC1.34□□□□□ -2.19
CLRN1P58418 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.34□□□□□ -2.19
CLRN1P58418 AC108729.3-201ENST00000513484 108 ntBASIC1.34□□□□□ -2.19
CLRN1P58418 RNU6-109P-201ENST00000516364 107 ntBASIC1.34□□□□□ -2.19
CLRN1P58418 RNU6-184P-201ENST00000516514 107 ntBASIC1.34□□□□□ -2.19
CLRN1P58418 RNU6-537P-201ENST00000517277 103 ntBASIC1.34□□□□□ -2.19
CLRN1P58418 AC106800.4-201ENST00000614905 153 ntBASIC1.34□□□□□ -2.19
CLRN1P58418 AL442128.1-201ENST00000615151 90 ntBASIC1.34□□□□□ -2.19
CLRN1P58418 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
CLRN1P58418 Y_RNA.98-201ENST00000363109 102 ntBASIC1.33□□□□□ -2.2
CLRN1P58418 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
CLRN1P58418 SNORD111-201ENST00000408139 94 ntBASIC1.33□□□□□ -2.2
CLRN1P58418 SNORD83.1-201ENST00000411362 77 ntBASIC1.33□□□□□ -2.2
CLRN1P58418 AC096949.1-201ENST00000412047 152 ntBASIC1.33□□□□□ -2.2
CLRN1P58418 RNU7-90P-201ENST00000459216 62 ntBASIC1.33□□□□□ -2.2
CLRN1P58418 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
CLRN1P58418 AC008163.1-202ENST00000636004 2889 ntBASIC1.33□□□□□ -2.2
CLRN1P58418 RNU1-17P-201ENST00000363022 152 ntBASIC1.32□□□□□ -2.2
CLRN1P58418 RNU6-934P-201ENST00000365154 107 ntBASIC1.32□□□□□ -2.2
CLRN1P58418 Y_RNA.377-201ENST00000365644 108 ntBASIC1.32□□□□□ -2.2
CLRN1P58418 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.32□□□□□ -2.2
CLRN1P58418 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CLRN1P58418 Y_RNA.10-201ENST00000362371 110 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 Y_RNA.247-201ENST00000364500 92 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 Y_RNA.544-201ENST00000384650 113 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 MIR222-201ENST00000384992 110 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 SNORA67.5-201ENST00000391036 107 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 SNORD93-201ENST00000408813 74 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 Y_RNA.601-201ENST00000410500 113 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 RPS29P28-201ENST00000446439 141 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 AP001318.4-201ENST00000616637 121 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.31□□□□□ -2.2
CLRN1P58418 U6.109-201ENST00000636749 87 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 AC023934.1-201ENST00000574529 2389 ntBASIC1.31□□□□□ -2.2
CLRN1P58418 RNU1-42P-201ENST00000364033 160 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 RNU6-60P-201ENST00000364792 103 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 RNY1P2-201ENST00000364820 117 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 MIR320A-201ENST00000385302 82 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 RNU6-955P-201ENST00000410497 104 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 AC015818.7-201ENST00000428754 109 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 AC087499.7-201ENST00000441958 109 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 SCARNA23-201ENST00000516060 130 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 Y_RNA.677-201ENST00000516401 85 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 RNU6-1006P-201ENST00000516998 103 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 AC138749.4-201ENST00000563970 127 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 Y_RNA.818-201ENST00000618813 71 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 AP001362.1-201ENST00000625165 124 ntBASIC1.3□□□□□ -2.2
CLRN1P58418 RNA5SP133-201ENST00000363368 119 ntBASIC1.29□□□□□ -2.2
CLRN1P58418 SNORD38.1-201ENST00000363863 68 ntBASIC1.29□□□□□ -2.2
CLRN1P58418 RNU1-36P-201ENST00000365130 165 ntBASIC1.29□□□□□ -2.2
CLRN1P58418 Y_RNA.348-201ENST00000365403 103 ntBASIC1.29□□□□□ -2.2
CLRN1P58418 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
CLRN1P58418 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CLRN1P58418 SNORD12-201ENST00000391002 90 ntBASIC1.29□□□□□ -2.2
CLRN1P58418 RNU7-185P-201ENST00000459215 60 ntBASIC1.29□□□□□ -2.2
CLRN1P58418 Y_RNA.659-201ENST00000515994 113 ntBASIC1.29□□□□□ -2.2
CLRN1P58418 AC096720.1-201ENST00000604441 183 ntBASIC1.29□□□□□ -2.2
CLRN1P58418 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLRN1P58418 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLRN1P58418 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CLRN1P58418 Y_RNA.588-201ENST00000391254 102 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms