Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SNORD67.1-201ENST00000516618 108 ntBASIC1.38□□□□□ -2.19
PER3P56645 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
PER3P56645 AC023827.1-201ENST00000569247 97 ntBASIC1.38□□□□□ -2.19
PER3P56645 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.38□□□□□ -2.19
PER3P56645 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PER3P56645 SNORD113.3-201ENST00000364630 78 ntBASIC1.37□□□□□ -2.19
PER3P56645 RNU6-949P-201ENST00000384040 107 ntBASIC1.37□□□□□ -2.19
PER3P56645 RNU6-44P-201ENST00000384045 107 ntBASIC1.37□□□□□ -2.19
PER3P56645 MIR7-2-201ENST00000384970 110 ntBASIC1.37□□□□□ -2.19
PER3P56645 AL035461.1-201ENST00000421490 332 ntBASIC1.37□□□□□ -2.19
PER3P56645 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.37□□□□□ -2.19
PER3P56645 RPL39P34-201ENST00000477141 156 ntBASIC1.37□□□□□ -2.19
PER3P56645 RNA5SP102-201ENST00000516865 106 ntBASIC1.37□□□□□ -2.19
PER3P56645 FAM71BP1-201ENST00000604431 523 ntBASIC1.37□□□□□ -2.19
PER3P56645 AC106800.4-201ENST00000614905 153 ntBASIC1.37□□□□□ -2.19
PER3P56645 AC008163.1-202ENST00000636004 2889 ntBASIC1.36□□□□□ -2.19
PER3P56645 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
PER3P56645 RNU6-1307P-201ENST00000391012 103 ntBASIC1.36□□□□□ -2.19
PER3P56645 AC096949.1-201ENST00000412047 152 ntBASIC1.36□□□□□ -2.19
PER3P56645 RNU7-90P-201ENST00000459216 62 ntBASIC1.36□□□□□ -2.19
PER3P56645 RNU7-137P-201ENST00000516788 62 ntBASIC1.36□□□□□ -2.19
PER3P56645 AL162726.3-218ENST00000636401 95 ntBASIC1.36□□□□□ -2.19
PER3P56645 AL589743.1-201ENST00000551932 2712 ntBASIC1.35□□□□□ -2.19
PER3P56645 RNU6-1107P-201ENST00000364817 104 ntBASIC1.35□□□□□ -2.19
PER3P56645 MIR206-201ENST00000384872 86 ntBASIC1.35□□□□□ -2.19
PER3P56645 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
PER3P56645 AC002429.1-201ENST00000437672 148 ntBASIC1.35□□□□□ -2.19
PER3P56645 AL353813.1-201ENST00000440700 253 ntBASIC1.35□□□□□ -2.19
PER3P56645 AC012676.2-201ENST00000619258 186 ntBASIC1.35□□□□□ -2.19
PER3P56645 AC027335.2-201ENST00000624030 375 ntBASIC1.35□□□□□ -2.19
PER3P56645 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PER3P56645 U8.6-201ENST00000364939 135 ntBASIC1.34□□□□□ -2.19
PER3P56645 SNORA22-201ENST00000383907 134 ntBASIC1.34□□□□□ -2.19
PER3P56645 U8.15-201ENST00000390947 134 ntBASIC1.34□□□□□ -2.19
PER3P56645 SNORD12-201ENST00000391002 90 ntBASIC1.34□□□□□ -2.19
PER3P56645 SNORD111-201ENST00000408139 94 ntBASIC1.34□□□□□ -2.19
PER3P56645 MRPL35P3-201ENST00000421557 364 ntBASIC1.34□□□□□ -2.19
PER3P56645 AC068339.1-201ENST00000526965 141 ntBASIC1.34□□□□□ -2.19
PER3P56645 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.34□□□□□ -2.19
PER3P56645 RNU6-363P-201ENST00000362895 105 ntBASIC1.33□□□□□ -2.2
PER3P56645 SNORD114-10-201ENST00000363409 72 ntBASIC1.33□□□□□ -2.2
PER3P56645 RNU4-67P-201ENST00000364569 141 ntBASIC1.33□□□□□ -2.2
PER3P56645 Y_RNA.323-201ENST00000365157 109 ntBASIC1.33□□□□□ -2.2
PER3P56645 MT-TF-201ENST00000387314 71 ntBASIC1.33□□□□□ -2.2
PER3P56645 RNU6-816P-201ENST00000390914 107 ntBASIC1.33□□□□□ -2.2
PER3P56645 RNU6-1268P-201ENST00000391214 107 ntBASIC1.33□□□□□ -2.2
PER3P56645 RNU6-1239P-201ENST00000391310 107 ntBASIC1.33□□□□□ -2.2
PER3P56645 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
PER3P56645 SNORD83.1-201ENST00000411362 77 ntBASIC1.33□□□□□ -2.2
PER3P56645 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
PER3P56645 RNU6-412P-201ENST00000516434 106 ntBASIC1.33□□□□□ -2.2
PER3P56645 RNU6-521P-201ENST00000516663 105 ntBASIC1.33□□□□□ -2.2
PER3P56645 AC105081.1-201ENST00000617727 106 ntBASIC1.33□□□□□ -2.2
PER3P56645 SNORA63.4-201ENST00000362763 126 ntBASIC1.32□□□□□ -2.2
PER3P56645 SNORD115-35-201ENST00000365122 82 ntBASIC1.32□□□□□ -2.2
PER3P56645 RNU6-1321P-201ENST00000390905 107 ntBASIC1.32□□□□□ -2.2
PER3P56645 MIR18B-201ENST00000454574 71 ntBASIC1.32□□□□□ -2.2
PER3P56645 RNU7-2P-201ENST00000516096 62 ntBASIC1.32□□□□□ -2.2
PER3P56645 MIR5009-201ENST00000578736 100 ntBASIC1.32□□□□□ -2.2
PER3P56645 RNU6-94P-201ENST00000607728 107 ntBASIC1.32□□□□□ -2.2
PER3P56645 RMST_2.1-201ENST00000617263 136 ntBASIC1.32□□□□□ -2.2
PER3P56645 RNU6-755P-201ENST00000364400 103 ntBASIC1.31□□□□□ -2.2
PER3P56645 Y_RNA.309-201ENST00000365046 111 ntBASIC1.31□□□□□ -2.2
PER3P56645 RNU6-1014P-201ENST00000383940 103 ntBASIC1.31□□□□□ -2.2
PER3P56645 RNU6-106P-201ENST00000384405 107 ntBASIC1.31□□□□□ -2.2
PER3P56645 MIR222-201ENST00000384992 110 ntBASIC1.31□□□□□ -2.2
PER3P56645 MIR605-201ENST00000385078 83 ntBASIC1.31□□□□□ -2.2
PER3P56645 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
PER3P56645 RNU6-679P-201ENST00000391003 106 ntBASIC1.31□□□□□ -2.2
PER3P56645 AC015818.7-201ENST00000428754 109 ntBASIC1.31□□□□□ -2.2
PER3P56645 AC087499.7-201ENST00000441958 109 ntBASIC1.31□□□□□ -2.2
PER3P56645 RNA5SP480-201ENST00000516840 109 ntBASIC1.31□□□□□ -2.2
PER3P56645 RNU6-369P-201ENST00000362515 102 ntBASIC1.3□□□□□ -2.2
PER3P56645 Y_RNA.49-201ENST00000362714 112 ntBASIC1.3□□□□□ -2.2
PER3P56645 Y_RNA.81-201ENST00000362997 102 ntBASIC1.3□□□□□ -2.2
PER3P56645 RNU6-934P-201ENST00000365154 107 ntBASIC1.3□□□□□ -2.2
PER3P56645 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.3□□□□□ -2.2
PER3P56645 MIR1912-201ENST00000410389 80 ntBASIC1.3□□□□□ -2.2
PER3P56645 SNORA7.5-201ENST00000410672 110 ntBASIC1.3□□□□□ -2.2
PER3P56645 RPL39P25-201ENST00000449384 154 ntBASIC1.3□□□□□ -2.2
PER3P56645 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
PER3P56645 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.3□□□□□ -2.2
PER3P56645 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
PER3P56645 Y_RNA.448-201ENST00000384185 108 ntBASIC1.29□□□□□ -2.2
PER3P56645 RNU6-554P-201ENST00000410466 106 ntBASIC1.29□□□□□ -2.2
PER3P56645 PDCD5P2-201ENST00000507570 312 ntBASIC1.29□□□□□ -2.2
PER3P56645 RNU7-40P-201ENST00000516397 64 ntBASIC1.29□□□□□ -2.2
PER3P56645 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.29□□□□□ -2.2
PER3P56645 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
PER3P56645 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
PER3P56645 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
PER3P56645 SNORD114-22-201ENST00000365423 72 ntBASIC1.28□□□□□ -2.2
PER3P56645 RNU6-409P-201ENST00000384114 104 ntBASIC1.28□□□□□ -2.2
PER3P56645 Y_RNA.507-201ENST00000384500 99 ntBASIC1.28□□□□□ -2.2
PER3P56645 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
PER3P56645 RNU7-185P-201ENST00000459215 60 ntBASIC1.28□□□□□ -2.2
PER3P56645 UBL5P1-201ENST00000507979 193 ntBASIC1.28□□□□□ -2.2
PER3P56645 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
PER3P56645 AC020891.4-201ENST00000605745 93 ntBASIC1.28□□□□□ -2.2
PER3P56645 uc_338.28-201ENST00000612082 187 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms