Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MIR6082-201ENST00000613604 109 ntBASIC0.44□□□□□ -2.34
PEX3P56589 Y_RNA.13-201ENST00000362403 112 ntBASIC0.43□□□□□ -2.34
PEX3P56589 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
PEX3P56589 Y_RNA.617-201ENST00000410920 90 ntBASIC0.43□□□□□ -2.34
PEX3P56589 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.43□□□□□ -2.34
PEX3P56589 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
PEX3P56589 RNU7-197P-201ENST00000458836 62 ntBASIC0.43□□□□□ -2.34
PEX3P56589 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
PEX3P56589 RNU6-508P-201ENST00000363231 103 ntBASIC0.42□□□□□ -2.34
PEX3P56589 AL512326.2-201ENST00000426359 151 ntBASIC0.42□□□□□ -2.34
PEX3P56589 RNU7-113P-201ENST00000459273 62 ntBASIC0.42□□□□□ -2.34
PEX3P56589 AC074198.2-201ENST00000508153 258 ntBASIC0.42□□□□□ -2.34
PEX3P56589 RNA5SP94-201ENST00000516917 108 ntBASIC0.42□□□□□ -2.34
PEX3P56589 MIR4305-201ENST00000583252 102 ntBASIC0.42□□□□□ -2.34
PEX3P56589 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
PEX3P56589 AC004792.1-201ENST00000614523 137 ntBASIC0.42□□□□□ -2.34
PEX3P56589 uc_338.16-201ENST00000621804 95 ntBASIC0.42□□□□□ -2.34
PEX3P56589 Y_RNA.272-201ENST00000364696 102 ntBASIC0.41□□□□□ -2.34
PEX3P56589 RNU6-690P-201ENST00000365242 106 ntBASIC0.41□□□□□ -2.34
PEX3P56589 AL022718.1-201ENST00000412004 84 ntBASIC0.41□□□□□ -2.34
PEX3P56589 MTATP6P21-201ENST00000440681 189 ntBASIC0.41□□□□□ -2.34
PEX3P56589 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
PEX3P56589 Y_RNA.662-201ENST00000516028 97 ntBASIC0.41□□□□□ -2.34
PEX3P56589 RNU7-79P-201ENST00000516082 62 ntBASIC0.41□□□□□ -2.34
PEX3P56589 RNU6-240P-201ENST00000516098 97 ntBASIC0.41□□□□□ -2.34
PEX3P56589 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.4□□□□□ -2.34
PEX3P56589 RNA5SP517-201ENST00000364724 117 ntBASIC0.4□□□□□ -2.35
PEX3P56589 Y_RNA.366-201ENST00000365540 102 ntBASIC0.4□□□□□ -2.35
PEX3P56589 Y_RNA.531-201ENST00000384589 121 ntBASIC0.4□□□□□ -2.35
PEX3P56589 AL603914.1-201ENST00000401964 204 ntBASIC0.4□□□□□ -2.35
PEX3P56589 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.4□□□□□ -2.35
PEX3P56589 Y_RNA.686-201ENST00000516548 134 ntBASIC0.4□□□□□ -2.35
PEX3P56589 MIR548AE2-201ENST00000583456 67 ntBASIC0.4□□□□□ -2.35
PEX3P56589 Y_RNA.32-201ENST00000362589 110 ntBASIC0.39□□□□□ -2.35
PEX3P56589 Y_RNA.580-201ENST00000391004 95 ntBASIC0.39□□□□□ -2.35
PEX3P56589 Y_RNA.584-201ENST00000391090 114 ntBASIC0.39□□□□□ -2.35
PEX3P56589 PCNPP3-201ENST00000393579 471 ntBASIC0.39□□□□□ -2.35
PEX3P56589 RNU7-123P-201ENST00000515911 60 ntBASIC0.39□□□□□ -2.35
PEX3P56589 SNORA25.16-201ENST00000516741 121 ntBASIC0.39□□□□□ -2.35
PEX3P56589 RNU7-137P-201ENST00000516788 62 ntBASIC0.39□□□□□ -2.35
PEX3P56589 MIR3678-201ENST00000578455 94 ntBASIC0.39□□□□□ -2.35
PEX3P56589 AL359881.1-201ENST00000602916 267 ntBASIC0.39□□□□□ -2.35
PEX3P56589 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.39□□□□□ -2.35
PEX3P56589 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
PEX3P56589 RNU6-403P-201ENST00000363163 104 ntBASIC0.38□□□□□ -2.35
PEX3P56589 SNORA36.1-201ENST00000363424 132 ntBASIC0.38□□□□□ -2.35
PEX3P56589 RNU6-309P-201ENST00000364573 106 ntBASIC0.38□□□□□ -2.35
PEX3P56589 RNU6-291P-201ENST00000384720 107 ntBASIC0.38□□□□□ -2.35
PEX3P56589 RNU6-394P-201ENST00000410735 107 ntBASIC0.38□□□□□ -2.35
PEX3P56589 RPL39P25-201ENST00000449384 154 ntBASIC0.38□□□□□ -2.35
PEX3P56589 RNU6-1194P-201ENST00000516208 104 ntBASIC0.38□□□□□ -2.35
PEX3P56589 RNA5SP33-201ENST00000516687 98 ntBASIC0.38□□□□□ -2.35
PEX3P56589 AC133485.4-201ENST00000561835 220 ntBASIC0.38□□□□□ -2.35
PEX3P56589 AC138907.4-201ENST00000570107 226 ntBASIC0.38□□□□□ -2.35
PEX3P56589 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
PEX3P56589 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
PEX3P56589 SNORA31.14-201ENST00000516728 116 ntBASIC0.37□□□□□ -2.35
PEX3P56589 AC112693.2-201ENST00000556538 232 ntBASIC0.37□□□□□ -2.35
PEX3P56589 AC021443.1-201ENST00000604478 211 ntBASIC0.37□□□□□ -2.35
PEX3P56589 MIR7111-201ENST00000619751 72 ntBASIC0.37□□□□□ -2.35
PEX3P56589 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
PEX3P56589 AL589743.1-201ENST00000551932 2712 ntBASIC0.37□□□□□ -2.35
PEX3P56589 Y_RNA.298-201ENST00000364960 107 ntBASIC0.36□□□□□ -2.35
PEX3P56589 RNU4-11P-201ENST00000365287 132 ntBASIC0.36□□□□□ -2.35
PEX3P56589 RNA5SP117-201ENST00000365294 118 ntBASIC0.36□□□□□ -2.35
PEX3P56589 RNU6-1130P-201ENST00000365434 107 ntBASIC0.36□□□□□ -2.35
PEX3P56589 SNORA32-201ENST00000384072 121 ntBASIC0.36□□□□□ -2.35
PEX3P56589 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
PEX3P56589 Y_RNA.536-201ENST00000384621 113 ntBASIC0.36□□□□□ -2.35
PEX3P56589 MIR216A-201ENST00000385063 110 ntBASIC0.36□□□□□ -2.35
PEX3P56589 MIR518A1-201ENST00000385068 85 ntBASIC0.36□□□□□ -2.35
PEX3P56589 Y_RNA.690-201ENST00000516603 95 ntBASIC0.36□□□□□ -2.35
PEX3P56589 SNORD67.1-201ENST00000516618 108 ntBASIC0.36□□□□□ -2.35
PEX3P56589 MTND5P34-201ENST00000568888 325 ntBASIC0.36□□□□□ -2.35
PEX3P56589 AC108081.1-201ENST00000604358 221 ntBASIC0.36□□□□□ -2.35
PEX3P56589 FTX_2.1-201ENST00000618816 94 ntBASIC0.36□□□□□ -2.35
PEX3P56589 SNORD118-201ENST00000363593 134 ntBASIC0.35□□□□□ -2.35
PEX3P56589 Y_RNA.174-201ENST00000363781 105 ntBASIC0.35□□□□□ -2.35
PEX3P56589 MIR644A-201ENST00000385262 94 ntBASIC0.35□□□□□ -2.35
PEX3P56589 SNORD37.2-201ENST00000391075 66 ntBASIC0.35□□□□□ -2.35
PEX3P56589 SNORA40.8-201ENST00000411034 126 ntBASIC0.35□□□□□ -2.35
PEX3P56589 RNU7-164P-201ENST00000459221 62 ntBASIC0.35□□□□□ -2.35
PEX3P56589 AC138749.4-201ENST00000563970 127 ntBASIC0.35□□□□□ -2.35
PEX3P56589 Y_RNA.778-201ENST00000620203 90 ntBASIC0.35□□□□□ -2.35
PEX3P56589 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.35□□□□□ -2.35
PEX3P56589 MIR6828-201ENST00000636181 60 ntBASIC0.35□□□□□ -2.35
PEX3P56589 SNORD114-10-201ENST00000363409 72 ntBASIC0.34□□□□□ -2.36
PEX3P56589 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.34□□□□□ -2.36
PEX3P56589 AC098479.1-201ENST00000609225 154 ntBASIC0.34□□□□□ -2.36
PEX3P56589 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
PEX3P56589 SNORD114-23-201ENST00000363536 72 ntBASIC0.33□□□□□ -2.36
PEX3P56589 Y_RNA.280-201ENST00000364765 112 ntBASIC0.33□□□□□ -2.36
PEX3P56589 SNORA72.6-201ENST00000384520 129 ntBASIC0.33□□□□□ -2.36
PEX3P56589 Y_RNA.567-201ENST00000384736 106 ntBASIC0.33□□□□□ -2.36
PEX3P56589 RNU6-679P-201ENST00000391003 106 ntBASIC0.33□□□□□ -2.36
PEX3P56589 RNU4-69P-201ENST00000410677 143 ntBASIC0.33□□□□□ -2.36
PEX3P56589 RNU6-531P-201ENST00000516694 104 ntBASIC0.33□□□□□ -2.36
PEX3P56589 RNA5SP133-201ENST00000363368 119 ntBASIC0.32□□□□□ -2.36
PEX3P56589 RNU6-460P-201ENST00000391158 108 ntBASIC0.32□□□□□ -2.36
PEX3P56589 RNY4P20-201ENST00000516678 93 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms