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Protein–RNA interactions for Protein: P55283
CDH4, Cadherin-4, human
Predictions only
Length
916 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH4
P55283
RNU4-58P-201
ENST00000363192
141 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
Y_RNA.121-201
ENST00000363309
113 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
RNA5SP133-201
ENST00000363368
119 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
RNA5SP128-201
ENST00000365305
116 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
SNORA2A-201
ENST00000383885
135 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
RNU6-1336P-201
ENST00000383886
109 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
Y_RNA.422-201
ENST00000384054
114 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
MIRLET7F2-201
ENST00000385277
83 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
RNU6-493P-201
ENST00000391321
108 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
MIR548H2-201
ENST00000408874
88 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
Y_RNA.797-201
ENST00000515977
94 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
AC138749.4-201
ENST00000563970
127 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
FAM13A-AS1_1.1-201
ENST00000612555
119 nt
BASIC
-0.07
□□□□□ -2.42
CDH4
P55283
Y_RNA.120-201
ENST00000363304
110 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
RNU6-702P-201
ENST00000364982
107 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
RNU6-1160P-201
ENST00000384546
104 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
RNU2-38P-201
ENST00000410856
79 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
AC023051.1-201
ENST00000414098
876 nt
TSL 5
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
RNU7-113P-201
ENST00000459273
62 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
RPL39P34-201
ENST00000477141
156 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
RNA5SP236-201
ENST00000516169
116 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
DEFB131E-201
ENST00000532329
154 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
MIR4308-201
ENST00000580634
81 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
MIR499B-201
ENST00000636498
73 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
U6.109-201
ENST00000636749
87 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
MIR371B-201
ENST00000638082
66 nt
BASIC
-0.08
□□□□□ -2.42
CDH4
P55283
SNORA25.7-201
ENST00000364375
127 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
RNU6-726P-201
ENST00000364680
107 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
Y_RNA.562-201
ENST00000384695
113 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
Y_RNA.571-201
ENST00000384753
98 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
MIR593-201
ENST00000384856
100 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
TRAJ54-201
ENST00000390484
60 nt
APPRIS P1
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
AC108059.2-201
ENST00000434626
151 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
AC244505.6-201
ENST00000452829
130 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
SNORD127-201
ENST00000458892
86 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
MTND1P19-201
ENST00000511780
315 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
RNA5SP33-201
ENST00000516687
98 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
RNU7-137P-201
ENST00000516788
62 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
AL359881.1-201
ENST00000602916
267 nt
BASIC
-0.09
□□□□□ -2.42
CDH4
P55283
Y_RNA.49-201
ENST00000362714
112 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
Y_RNA.52-201
ENST00000362760
96 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
Y_RNA.182-201
ENST00000363880
111 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
RNU6-923P-201
ENST00000364753
107 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
Y_RNA.326-201
ENST00000365176
113 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
SNORA32-201
ENST00000384072
121 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
MIR145-201
ENST00000384967
88 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
MIR610-201
ENST00000385139
96 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
SNORD58.1-201
ENST00000391313
66 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
AL022718.1-201
ENST00000412004
84 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
SNORD67.1-201
ENST00000516618
108 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
DEFB131B-201
ENST00000530210
213 nt
APPRIS P1
TSL 1 (best)
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
AL117187.1-201
ENST00000555482
181 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
AC006504.6-201
ENST00000590142
199 nt
BASIC
-0.1
□□□□□ -2.43
CDH4
P55283
Y_RNA.56-201
ENST00000362798
112 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
Y_RNA.119-201
ENST00000363301
96 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
SNORD115-24-201
ENST00000363528
82 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
RNU6-275P-201
ENST00000364910
107 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
Y_RNA.626-201
ENST00000411288
95 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
MIR1270-201
ENST00000459320
83 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
Y_RNA.660-201
ENST00000516002
120 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
RNU6-782P-201
ENST00000516852
104 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
AC141557.1-201
ENST00000540982
400 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
MIR548AE2-201
ENST00000583456
67 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
AC079466.2-201
ENST00000585394
185 nt
TSL 5
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
AL360085.1-201
ENST00000604713
532 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
AL162376.1-201
ENST00000624117
175 nt
BASIC
-0.11
□□□□□ -2.43
CDH4
P55283
RNY1P2-201
ENST00000364820
117 nt
BASIC
-0.12
□□□□□ -2.43
CDH4
P55283
Y_RNA.412-201
ENST00000384001
104 nt
BASIC
-0.12
□□□□□ -2.43
CDH4
P55283
Y_RNA.531-201
ENST00000384589
121 nt
BASIC
-0.12
□□□□□ -2.43
CDH4
P55283
MIR548H3-201
ENST00000408771
118 nt
BASIC
-0.12
□□□□□ -2.43
CDH4
P55283
MTND2P23-201
ENST00000422990
651 nt
BASIC
-0.12
□□□□□ -2.43
CDH4
P55283
RNU2-35P-201
ENST00000516446
142 nt
BASIC
-0.12
□□□□□ -2.43
CDH4
P55283
RNU7-161P-201
ENST00000517289
62 nt
BASIC
-0.12
□□□□□ -2.43
CDH4
P55283
MIR4305-201
ENST00000583252
102 nt
BASIC
-0.12
□□□□□ -2.43
CDH4
P55283
MIR4743-201
ENST00000584576
69 nt
BASIC
-0.12
□□□□□ -2.43
CDH4
P55283
MIR101-2-201
ENST00000362195
79 nt
BASIC
-0.13
□□□□□ -2.43
CDH4
P55283
Y_RNA.47-201
ENST00000362697
108 nt
BASIC
-0.13
□□□□□ -2.43
CDH4
P55283
RNU6-161P-201
ENST00000363051
106 nt
BASIC
-0.13
□□□□□ -2.43
CDH4
P55283
SNORD114-10-201
ENST00000363409
72 nt
BASIC
-0.13
□□□□□ -2.43
CDH4
P55283
Y_RNA.280-201
ENST00000364765
112 nt
BASIC
-0.13
□□□□□ -2.43
CDH4
P55283
RNU4-70P-201
ENST00000384579
139 nt
BASIC
-0.13
□□□□□ -2.43
CDH4
P55283
MIR501-201
ENST00000390204
84 nt
BASIC
-0.13
□□□□□ -2.43
CDH4
P55283
AC098479.1-201
ENST00000609225
154 nt
BASIC
-0.13
□□□□□ -2.43
CDH4
P55283
U6.106-201
ENST00000636360
105 nt
BASIC
-0.13
□□□□□ -2.43
CDH4
P55283
Y_RNA.11-201
ENST00000362375
109 nt
BASIC
-0.14
□□□□□ -2.43
CDH4
P55283
Y_RNA.75-201
ENST00000362927
97 nt
BASIC
-0.14
□□□□□ -2.43
CDH4
P55283
RNA5SP403-201
ENST00000363598
108 nt
BASIC
-0.14
□□□□□ -2.43
CDH4
P55283
RNU6-1082P-201
ENST00000364574
107 nt
BASIC
-0.14
□□□□□ -2.43
CDH4
P55283
Y_RNA.357-201
ENST00000365487
109 nt
BASIC
-0.14
□□□□□ -2.43
CDH4
P55283
MIR606-201
ENST00000384851
96 nt
BASIC
-0.14
□□□□□ -2.43
CDH4
P55283
AC138869.1-201
ENST00000568623
124 nt
BASIC
-0.14
□□□□□ -2.43
CDH4
P55283
SNORA70.25-201
ENST00000612741
95 nt
BASIC
-0.14
□□□□□ -2.43
CDH4
P55283
AC105081.1-201
ENST00000617727
106 nt
BASIC
-0.14
□□□□□ -2.43
CDH4
P55283
Y_RNA.145-201
ENST00000363527
102 nt
BASIC
-0.15
□□□□□ -2.43
CDH4
P55283
SNORD27-201
ENST00000363981
72 nt
BASIC
-0.15
□□□□□ -2.43
CDH4
P55283
Y_RNA.288-201
ENST00000364854
92 nt
BASIC
-0.15
□□□□□ -2.43
CDH4
P55283
RNU6-690P-201
ENST00000365242
106 nt
BASIC
-0.15
□□□□□ -2.43
CDH4
P55283
RNU6-756P-201
ENST00000383997
107 nt
BASIC
-0.15
□□□□□ -2.43
CDH4
P55283
RNU6-929P-201
ENST00000384429
107 nt
BASIC
-0.15
□□□□□ -2.43
CDH4
P55283
RNU6-768P-201
ENST00000384683
107 nt
BASIC
-0.15
□□□□□ -2.43
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Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms