Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 Y_RNA.47-201ENST00000362697 108 ntBASIC0.06□□□□□ -2.4
CASP9P55211 Y_RNA.423-201ENST00000384057 113 ntBASIC0.06□□□□□ -2.4
CASP9P55211 RNU6-535P-201ENST00000384722 107 ntBASIC0.06□□□□□ -2.4
CASP9P55211 MIR606-201ENST00000384851 96 ntBASIC0.06□□□□□ -2.4
CASP9P55211 RNA5SP144-201ENST00000410846 116 ntBASIC0.06□□□□□ -2.4
CASP9P55211 RNU7-79P-201ENST00000516082 62 ntBASIC0.06□□□□□ -2.4
CASP9P55211 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
CASP9P55211 MRPS18CP4-201ENST00000535821 231 ntBASIC0.06□□□□□ -2.4
CASP9P55211 SNORD115-2-201ENST00000362842 82 ntBASIC0.05□□□□□ -2.4
CASP9P55211 Y_RNA.171-201ENST00000363760 102 ntBASIC0.05□□□□□ -2.4
CASP9P55211 SNORA25.7-201ENST00000364375 127 ntBASIC0.05□□□□□ -2.4
CASP9P55211 Y_RNA.288-201ENST00000364854 92 ntBASIC0.05□□□□□ -2.4
CASP9P55211 RNU6-275P-201ENST00000364910 107 ntBASIC0.05□□□□□ -2.4
CASP9P55211 SNORD115-20-201ENST00000365099 82 ntBASIC0.05□□□□□ -2.4
CASP9P55211 RNU6-1126P-201ENST00000384002 107 ntBASIC0.05□□□□□ -2.4
CASP9P55211 RNU6-493P-201ENST00000391321 108 ntBASIC0.05□□□□□ -2.4
CASP9P55211 MIR4308-201ENST00000580634 81 ntBASIC0.05□□□□□ -2.4
CASP9P55211 SNORA9.1-201ENST00000362412 131 ntBASIC0.04□□□□□ -2.4
CASP9P55211 RNU6-187P-201ENST00000384139 106 ntBASIC0.04□□□□□ -2.4
CASP9P55211 RNU6-738P-201ENST00000384531 106 ntBASIC0.04□□□□□ -2.4
CASP9P55211 Y_RNA.571-201ENST00000384753 98 ntBASIC0.04□□□□□ -2.4
CASP9P55211 HAR1A.1-201ENST00000459583 118 ntBASIC0.04□□□□□ -2.4
CASP9P55211 AC008737.2-201ENST00000599446 118 ntBASIC0.04□□□□□ -2.4
CASP9P55211 Y_RNA.812-201ENST00000610788 101 ntBASIC0.04□□□□□ -2.4
CASP9P55211 Y_RNA.784-201ENST00000613803 101 ntBASIC0.04□□□□□ -2.4
CASP9P55211 Y_RNA.787-201ENST00000616522 101 ntBASIC0.04□□□□□ -2.4
CASP9P55211 Y_RNA.780-201ENST00000617336 101 ntBASIC0.04□□□□□ -2.4
CASP9P55211 Y_RNA.801-201ENST00000619005 101 ntBASIC0.04□□□□□ -2.4
CASP9P55211 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
CASP9P55211 Y_RNA.149-201ENST00000363558 117 ntBASIC0.03□□□□□ -2.4
CASP9P55211 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
CASP9P55211 DEFB131E-201ENST00000532329 154 ntBASIC0.03□□□□□ -2.4
CASP9P55211 MIR4636-201ENST00000582271 80 ntBASIC0.03□□□□□ -2.4
CASP9P55211 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.03□□□□□ -2.4
CASP9P55211 Y_RNA.20-201ENST00000362479 113 ntBASIC0.02□□□□□ -2.41
CASP9P55211 Y_RNA.75-201ENST00000362927 97 ntBASIC0.02□□□□□ -2.41
CASP9P55211 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
CASP9P55211 Y_RNA.182-201ENST00000363880 111 ntBASIC0.02□□□□□ -2.41
CASP9P55211 Y_RNA.470-201ENST00000384307 117 ntBASIC0.02□□□□□ -2.41
CASP9P55211 MIRLET7F2-201ENST00000385277 83 ntBASIC0.02□□□□□ -2.41
CASP9P55211 Y_RNA.626-201ENST00000411288 95 ntBASIC0.02□□□□□ -2.41
CASP9P55211 RNA5SP236-201ENST00000516169 116 ntBASIC0.02□□□□□ -2.41
CASP9P55211 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.02□□□□□ -2.41
CASP9P55211 TUG1_4.1-201ENST00000619464 181 ntBASIC0.02□□□□□ -2.41
CASP9P55211 AC244669.1-204ENST00000621564 178 ntBASIC0.02□□□□□ -2.41
CASP9P55211 Y_RNA.52-201ENST00000362760 96 ntBASIC0.01□□□□□ -2.41
CASP9P55211 RNU4-58P-201ENST00000363192 141 ntBASIC0.01□□□□□ -2.41
CASP9P55211 SNORA63-201ENST00000363450 132 ntBASIC0.01□□□□□ -2.41
CASP9P55211 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
CASP9P55211 PCNPP3-201ENST00000393579 471 ntBASIC0.01□□□□□ -2.41
CASP9P55211 AL022718.1-201ENST00000412004 84 ntBASIC0.01□□□□□ -2.41
CASP9P55211 MTND2P23-201ENST00000422990 651 ntBASIC0.01□□□□□ -2.41
CASP9P55211 RNU7-113P-201ENST00000459273 62 ntBASIC0.01□□□□□ -2.41
CASP9P55211 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
CASP9P55211 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
CASP9P55211 Y_RNA.170-201ENST00000363746 110 ntBASIC0□□□□□ -2.41
CASP9P55211 RNU4-70P-201ENST00000384579 139 ntBASIC0□□□□□ -2.41
CASP9P55211 Y_RNA.556-201ENST00000384677 113 ntBASIC0□□□□□ -2.41
CASP9P55211 MIR1265-201ENST00000408444 86 ntBASIC0□□□□□ -2.41
CASP9P55211 RNU6-531P-201ENST00000516694 104 ntBASIC0□□□□□ -2.41
CASP9P55211 MIR5589-201ENST00000579442 60 ntBASIC0□□□□□ -2.41
CASP9P55211 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
CASP9P55211 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0□□□□□ -2.41
CASP9P55211 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 RNA5SP133-201ENST00000363368 119 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 RNA5SP245-201ENST00000364239 121 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 RNU6-923P-201ENST00000364753 107 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 MIR643-201ENST00000385267 97 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 MIR1912-201ENST00000410389 80 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 MIR4752-201ENST00000579672 72 ntBASIC-0.01□□□□□ -2.41
CASP9P55211 SNORD27-201ENST00000363981 72 ntBASIC-0.02□□□□□ -2.41
CASP9P55211 MIR760-201ENST00000390220 80 ntBASIC-0.02□□□□□ -2.41
CASP9P55211 RNA5SP33-201ENST00000516687 98 ntBASIC-0.02□□□□□ -2.41
CASP9P55211 MIR4802-201ENST00000581881 80 ntBASIC-0.02□□□□□ -2.41
CASP9P55211 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 MTCYBP9-201ENST00000431021 303 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 RNU7-137P-201ENST00000516788 62 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 AC138749.4-201ENST00000563970 127 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 AC011603.4-201ENST00000611325 277 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 U6.106-201ENST00000636360 105 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 U6.109-201ENST00000636749 87 ntBASIC-0.03□□□□□ -2.41
CASP9P55211 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
CASP9P55211 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.04□□□□□ -2.42
CASP9P55211 SNORA63.5-201ENST00000363548 123 ntBASIC-0.04□□□□□ -2.42
CASP9P55211 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.04□□□□□ -2.42
CASP9P55211 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.04□□□□□ -2.42
CASP9P55211 RNU6-127P-201ENST00000390897 107 ntBASIC-0.04□□□□□ -2.42
CASP9P55211 AC244505.6-201ENST00000452829 130 ntBASIC-0.04□□□□□ -2.42
CASP9P55211 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.04□□□□□ -2.42
CASP9P55211 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
CASP9P55211 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
CASP9P55211 MIR3149-201ENST00000584629 83 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms