Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.33□□□□□ -2.2
TTC3P53804 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.33□□□□□ -2.2
TTC3P53804 SEPT14P17-201ENST00000617978 177 ntBASIC1.33□□□□□ -2.2
TTC3P53804 MIR6740-201ENST00000618268 113 ntBASIC1.33□□□□□ -2.2
TTC3P53804 MIR6841-201ENST00000637129 72 ntBASIC1.33□□□□□ -2.2
TTC3P53804 SNORA25.3-201ENST00000363205 127 ntBASIC1.33□□□□□ -2.2
TTC3P53804 Y_RNA.163-201ENST00000363702 113 ntBASIC1.33□□□□□ -2.2
TTC3P53804 MIR7-2-201ENST00000384970 110 ntBASIC1.33□□□□□ -2.2
TTC3P53804 RNU6-1086P-201ENST00000410930 100 ntBASIC1.33□□□□□ -2.2
TTC3P53804 RNU6-947P-201ENST00000516264 106 ntBASIC1.33□□□□□ -2.2
TTC3P53804 RNU7-53P-201ENST00000516705 60 ntBASIC1.33□□□□□ -2.2
TTC3P53804 SNORA77B-201ENST00000578179 125 ntBASIC1.33□□□□□ -2.2
TTC3P53804 AL512310.12-203ENST00000640543 90 ntBASIC1.33□□□□□ -2.2
TTC3P53804 Y_RNA.369-201ENST00000365568 117 ntBASIC1.32□□□□□ -2.2
TTC3P53804 MIR590-201ENST00000385008 97 ntBASIC1.32□□□□□ -2.2
TTC3P53804 AC096949.1-201ENST00000412047 152 ntBASIC1.32□□□□□ -2.2
TTC3P53804 SNORA44.1-201ENST00000517031 108 ntBASIC1.32□□□□□ -2.2
TTC3P53804 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
TTC3P53804 MIR4299-201ENST00000577899 72 ntBASIC1.32□□□□□ -2.2
TTC3P53804 SNORA22.1-201ENST00000362701 134 ntBASIC1.32□□□□□ -2.2
TTC3P53804 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
TTC3P53804 RNU7-79P-201ENST00000516082 62 ntBASIC1.32□□□□□ -2.2
TTC3P53804 MIR6515-201ENST00000619843 57 ntBASIC1.32□□□□□ -2.2
TTC3P53804 SNORD45B-201ENST00000364617 72 ntBASIC1.31□□□□□ -2.2
TTC3P53804 RNY1P13-201ENST00000365030 105 ntBASIC1.31□□□□□ -2.2
TTC3P53804 RNU6-756P-201ENST00000383997 107 ntBASIC1.31□□□□□ -2.2
TTC3P53804 SNORD77B-201ENST00000391112 67 ntBASIC1.31□□□□□ -2.2
TTC3P53804 snoU13.21-201ENST00000459368 105 ntBASIC1.31□□□□□ -2.2
TTC3P53804 RNA5SP220-201ENST00000516298 104 ntBASIC1.31□□□□□ -2.2
TTC3P53804 AP000753.3-201ENST00000604083 169 ntBASIC1.31□□□□□ -2.2
TTC3P53804 AC091304.10-201ENST00000641554 121 ntBASIC1.31□□□□□ -2.2
TTC3P53804 Y_RNA.10-201ENST00000362371 110 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-294P-201ENST00000364999 102 ntBASIC1.3□□□□□ -2.2
TTC3P53804 Y_RNA.544-201ENST00000384650 113 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-816P-201ENST00000390914 107 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-1268P-201ENST00000391214 107 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-1239P-201ENST00000391310 107 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-447P-201ENST00000410293 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-1118P-201ENST00000410382 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-1076P-201ENST00000410397 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-355P-201ENST00000410427 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-791P-201ENST00000410467 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-705P-201ENST00000410601 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-1100P-201ENST00000410691 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-860P-201ENST00000410860 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-1217P-201ENST00000411276 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-785P-201ENST00000411324 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU7-48P-201ENST00000458875 63 ntBASIC1.3□□□□□ -2.2
TTC3P53804 Y_RNA.694-201ENST00000516677 117 ntBASIC1.3□□□□□ -2.2
TTC3P53804 U6.90-201ENST00000614007 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 U6.70-201ENST00000620287 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 MIR4679-1-201ENST00000637619 75 ntBASIC1.3□□□□□ -2.2
TTC3P53804 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
TTC3P53804 RNA5SP133-201ENST00000363368 119 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-342P-201ENST00000384521 104 ntBASIC1.3□□□□□ -2.2
TTC3P53804 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TTC3P53804 BX276092.1-201ENST00000427368 251 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU7-2P-201ENST00000516096 62 ntBASIC1.3□□□□□ -2.2
TTC3P53804 MIR548AE2-201ENST00000583456 67 ntBASIC1.3□□□□□ -2.2
TTC3P53804 AC096720.1-201ENST00000604441 183 ntBASIC1.3□□□□□ -2.2
TTC3P53804 AC022709.1-201ENST00000615967 87 ntBASIC1.3□□□□□ -2.2
TTC3P53804 RNU6-1313P-201ENST00000362622 102 ntBASIC1.29□□□□□ -2.2
TTC3P53804 AC005908.1-201ENST00000468701 347 ntBASIC1.29□□□□□ -2.2
TTC3P53804 SCARNA23-201ENST00000516060 130 ntBASIC1.29□□□□□ -2.2
TTC3P53804 RNU11-2P-201ENST00000516898 142 ntBASIC1.29□□□□□ -2.2
TTC3P53804 Y_RNA.93-201ENST00000363066 109 ntBASIC1.28□□□□□ -2.2
TTC3P53804 RNU6-640P-201ENST00000363693 105 ntBASIC1.28□□□□□ -2.2
TTC3P53804 RNU6-521P-201ENST00000516663 105 ntBASIC1.28□□□□□ -2.2
TTC3P53804 AC133485.1-201ENST00000567176 124 ntBASIC1.28□□□□□ -2.2
TTC3P53804 PRELID3BP2-201ENST00000605362 201 ntBASIC1.28□□□□□ -2.2
TTC3P53804 SNORD33-201ENST00000362761 85 ntBASIC1.28□□□□□ -2.2
TTC3P53804 Y_RNA.107-201ENST00000363190 121 ntBASIC1.28□□□□□ -2.2
TTC3P53804 RNA5SP48-201ENST00000363969 126 ntBASIC1.28□□□□□ -2.2
TTC3P53804 SNORA51.5-201ENST00000384126 131 ntBASIC1.28□□□□□ -2.2
TTC3P53804 SNORA2B-201ENST00000384583 137 ntBASIC1.28□□□□□ -2.2
TTC3P53804 RNU6-613P-201ENST00000410412 108 ntBASIC1.28□□□□□ -2.2
TTC3P53804 MRPL35P3-201ENST00000421557 364 ntBASIC1.28□□□□□ -2.2
TTC3P53804 RNU6-904P-201ENST00000516206 101 ntBASIC1.28□□□□□ -2.2
TTC3P53804 RNU6-970P-201ENST00000516312 107 ntBASIC1.28□□□□□ -2.2
TTC3P53804 AP003716.2-201ENST00000528260 108 ntBASIC1.28□□□□□ -2.2
TTC3P53804 AC141557.1-201ENST00000540982 400 ntBASIC1.28□□□□□ -2.2
TTC3P53804 MIR222-201ENST00000384992 110 ntBASIC1.27□□□□□ -2.21
TTC3P53804 MIR30A-201ENST00000385092 71 ntBASIC1.27□□□□□ -2.21
TTC3P53804 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
TTC3P53804 MIR1302-5-201ENST00000408164 150 ntBASIC1.27□□□□□ -2.21
TTC3P53804 RPS29P28-201ENST00000446439 141 ntBASIC1.27□□□□□ -2.21
TTC3P53804 RPL30P7-201ENST00000479312 323 ntBASIC1.27□□□□□ -2.21
TTC3P53804 AL133373.1-201ENST00000497098 94 ntBASIC1.27□□□□□ -2.21
TTC3P53804 AC008834.1-201ENST00000511612 175 ntBASIC1.27□□□□□ -2.21
TTC3P53804 RNU6-1223P-201ENST00000517124 104 ntBASIC1.27□□□□□ -2.21
TTC3P53804 AL512310.8-201ENST00000550183 120 ntBASIC1.27□□□□□ -2.21
TTC3P53804 Y_RNA.220-201ENST00000364244 109 ntBASIC1.27□□□□□ -2.21
TTC3P53804 RNU6-1201P-201ENST00000384227 107 ntBASIC1.27□□□□□ -2.21
TTC3P53804 RPS29P1-201ENST00000465274 159 ntBASIC1.27□□□□□ -2.21
TTC3P53804 UBL5P1-201ENST00000507979 193 ntBASIC1.27□□□□□ -2.21
TTC3P53804 MIR4694-201ENST00000578534 80 ntBASIC1.27□□□□□ -2.21
TTC3P53804 Y_RNA.96-201ENST00000363092 109 ntBASIC1.26□□□□□ -2.21
TTC3P53804 RNU6-1163P-201ENST00000364516 107 ntBASIC1.26□□□□□ -2.21
TTC3P53804 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
TTC3P53804 MIR1302-4-201ENST00000408701 150 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms